| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222526495
Identifier: 222526495
GI number: 222526495
Start: 4068097
End: 4069095
Strand: Direct
Name: 222526495
Synonym: Chy400_3262
Alternate gene names: NA
Gene position: 4068097-4069095 (Clockwise)
Preceding gene: 222526494
Following gene: 222526496
Centisome position: 77.21
GC content: 57.36
Gene sequence:
>999_bases ATGATCTACACCGATCCCCGGCAAGCGGTCGAACCGATCCGGTCACTGCTGGATCAGACTCAACGGATTCTGGTGCTGAG CCACGTGAATCCTGATGGTGATGCGATTGGGTCAATGTTGGCAACTATGCACGTCTTGCGTGCATTGGGTAAAGAAGCGA TTGCAGTCGCTTCCTCTCCGCCGATTGACTACTGTGCTGTTTTGCCCGGTTTTCCCGATTTGCTCGTGTATCAATCCGGC ACCAAGCTCCCGGCCTGCGATCTGATCTGGATGGTAGATGTGGCCCATCTCTCGCGCGCCGGTCTGATCTACGATGAGCA CGCAGCGTTTCTCAACAATCGGCCACTCATCATTGTTGATCACCATGCCACCAATGACGGCGGTGGTACGGTGAGTCTCA TTCAGCCGCAGATCCCTTCCTGCGCTGAGGTTTTACTCGATCTGTTTACCGCACTCGCCTGGCCGATCTCGGCTGACGCA GCAACATGCCTCTACCTGGGCATGCTCACCGACACGCAGAGCTTTCAGACACCAAATGTTGCTCCTGCAACGATGCGTCG CGCTGCAATGTTGCTGGAAGCCGGTGCTGCCAAACAACCGGTCATCGATGCTGTCTTCTTTTCGATTCCACCGTCTACCC TGCGTTTGACCGGTATGGCAATGGCGCAGCTCCAGCAGGAAGATGGTATCTTCTGGACGGTCGTTTCCCAAGAGATGTTG CAGGCGGCGAATGCTGATGAGTCGGCAACCGATGATACGGTCTCCCGCCTCCAACGGGTGGCCGGCATGCGGGCCTGTGT CCTCTTTCGCGAACGTCCTGATGGAACGGTAAAGATCAGTTTGCGTTCGGTACCGGGGGTTGACGTGGCGGCAGTTGCTC AGCGTTGGGGTGGTGGTGGTCACCGTCAGGCTGCGGGGGCAACGTTGACCATGAGCCTCACTGCGGCAGTGGATGCAGTC CTTCCCGCCCTACGCGAAGCTGTGCATGGGAAGCAATGA
Upstream 100 bases:
>100_bases GGCCGCGCCACAATCTGCGTCTCAAAGAGATCAAGAAGCGGGCTGGTCATTCGGTGTACCGCATTATCGCGCCAGCAGCT ACGGTACCAACAGGAGGCTT
Downstream 100 bases:
>100_bases CAGCATTAACAGGATTTCTGGTTGTCGATAAACCGGCTGGTCTGACATCGCACGATGTGGTGGCCCGCGTGCGCCGACTG GCAGGGCGGGCGGTAAAGGT
Product: phosphoesterase RecJ domain-containing protein
Products: NA
Alternate protein names: Mgp1; ORF-1 protein [H]
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MIYTDPRQAVEPIRSLLDQTQRILVLSHVNPDGDAIGSMLATMHVLRALGKEAIAVASSPPIDYCAVLPGFPDLLVYQSG TKLPACDLIWMVDVAHLSRAGLIYDEHAAFLNNRPLIIVDHHATNDGGGTVSLIQPQIPSCAEVLLDLFTALAWPISADA ATCLYLGMLTDTQSFQTPNVAPATMRRAAMLLEAGAAKQPVIDAVFFSIPPSTLRLTGMAMAQLQQEDGIFWTVVSQEML QAANADESATDDTVSRLQRVAGMRACVLFRERPDGTVKISLRSVPGVDVAAVAQRWGGGGHRQAAGATLTMSLTAAVDAV LPALREAVHGKQ
Sequences:
>Translated_332_residues MIYTDPRQAVEPIRSLLDQTQRILVLSHVNPDGDAIGSMLATMHVLRALGKEAIAVASSPPIDYCAVLPGFPDLLVYQSG TKLPACDLIWMVDVAHLSRAGLIYDEHAAFLNNRPLIIVDHHATNDGGGTVSLIQPQIPSCAEVLLDLFTALAWPISADA ATCLYLGMLTDTQSFQTPNVAPATMRRAAMLLEAGAAKQPVIDAVFFSIPPSTLRLTGMAMAQLQQEDGIFWTVVSQEML QAANADESATDDTVSRLQRVAGMRACVLFRERPDGTVKISLRSVPGVDVAAVAQRWGGGGHRQAAGATLTMSLTAAVDAV LPALREAVHGKQ >Mature_332_residues MIYTDPRQAVEPIRSLLDQTQRILVLSHVNPDGDAIGSMLATMHVLRALGKEAIAVASSPPIDYCAVLPGFPDLLVYQSG TKLPACDLIWMVDVAHLSRAGLIYDEHAAFLNNRPLIIVDHHATNDGGGTVSLIQPQIPSCAEVLLDLFTALAWPISADA ATCLYLGMLTDTQSFQTPNVAPATMRRAAMLLEAGAAKQPVIDAVFFSIPPSTLRLTGMAMAQLQQEDGIFWTVVSQEML QAANADESATDDTVSRLQRVAGMRACVLFRERPDGTVKISLRSVPGVDVAAVAQRWGGGGHRQAAGATLTMSLTAAVDAV LPALREAVHGKQ
Specific function: Unknown
COG id: COG0618
COG function: function code R; Exopolyphosphatase-related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mgp1/MG371 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003156 - InterPro: IPR001667 [H]
Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]
EC number: NA
Molecular weight: Translated: 35412; Mature: 35412
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYTDPRQAVEPIRSLLDQTQRILVLSHVNPDGDAIGSMLATMHVLRALGKEAIAVASSP CCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHCHHHEEECCCC PIDYCAVLPGFPDLLVYQSGTKLPACDLIWMVDVAHLSRAGLIYDEHAAFLNNRPLIIVD CCCEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEECHHHHHCCCCEEEEE HHATNDGGGTVSLIQPQIPSCAEVLLDLFTALAWPISADAATCLYLGMLTDTQSFQTPNV CCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCC APATMRRAAMLLEAGAAKQPVIDAVFFSIPPSTLRLTGMAMAQLQQEDGIFWTVVSQEML CHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHH QAANADESATDDTVSRLQRVAGMRACVLFRERPDGTVKISLRSVPGVDVAAVAQRWGGGG HHCCCCCCCCHHHHHHHHHHHHHHEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHCCCC HRQAAGATLTMSLTAAVDAVLPALREAVHGKQ CCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIYTDPRQAVEPIRSLLDQTQRILVLSHVNPDGDAIGSMLATMHVLRALGKEAIAVASSP CCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHCHHHEEECCCC PIDYCAVLPGFPDLLVYQSGTKLPACDLIWMVDVAHLSRAGLIYDEHAAFLNNRPLIIVD CCCEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEECHHHHHCCCCEEEEE HHATNDGGGTVSLIQPQIPSCAEVLLDLFTALAWPISADAATCLYLGMLTDTQSFQTPNV CCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCC APATMRRAAMLLEAGAAKQPVIDAVFFSIPPSTLRLTGMAMAQLQQEDGIFWTVVSQEML CHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHH QAANADESATDDTVSRLQRVAGMRACVLFRERPDGTVKISLRSVPGVDVAAVAQRWGGGG HHCCCCCCCCHHHHHHHHHHHHHHEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHCCCC HRQAAGATLTMSLTAAVDAVLPALREAVHGKQ CCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7569993; 2583522 [H]