| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is prsA [H]
Identifier: 222526384
GI number: 222526384
Start: 3898090
End: 3899055
Strand: Direct
Name: prsA [H]
Synonym: Chy400_3150
Alternate gene names: 222526384
Gene position: 3898090-3899055 (Clockwise)
Preceding gene: 222526381
Following gene: 222526385
Centisome position: 73.98
GC content: 59.73
Gene sequence:
>966_bases GTGAGTGTTGATGCGTTTTTTCGTCGGCTGGTGTGGTTGGGGTTGGTTGCCAGTCTGCTGTTAACCGCCTGTGGTGCGCC ATCTGGGCCGACTGTTGCCGGTTCGCCGACGACGGGTAATCCCCAAACGCCGCCGTCGCCGGAAGCTGGAGGTACGAGTG GTACTGTGCCGGCACCCGACGATGCAATTGCCCGAGTCGGTGAGGAGTTTATCTTGCGGCGCGATTTTGACCGGCTCTAT TTGCCCGGTGCTGACCCACAGAACCTGATCGACCAAATGATCGATGTCGAGCTGGTTGTGCAGGCAGCCCTGGCCGAAGG GGCAACGGTTGATGAGGCGACTATTGACAGTCAGGTTGAGCAGTTGCGTCTCGCCCAGGCTGGAGGTGATGAAGCGCAAT TTCTGACCTTTCTCCAGGATAACAATATCGCTGACGAAGAGGAATTGCGTCGGCTGCTGCGCCGTGATTATCTGATCGAG CAGATGTTGCTCAAGCACACTACGGCTGAGCAGGTGCGCGCCCGTCATATTCTGGTAGCGGCGACTCCGGAGGAGGCCGA GAGCCGGAAGGCAACTGCCGAGGCGATCCTGGCCGAATTGCAGGGTGGCGCTGATTTCGCCGCGTTGGCCCGGGCACGTT CTGATGATCCGGGATCGGCAGCGCAGGGTGGTGATCTGGGATGGGCACCGCGGGGTGTCTACGTGGAACCGTTTGAAGAA GCGGTGTTCAGCATGCAGCCCGGTGAATTGCGCCTCGTGCAAACCGATTTTGGCTGGCATATCATTGAAGTAACCGAAGG CCCGGAAGTGCGCTCGTTTACTGATCGGGCGCTCCTGGAGACCCAGGCCGGTCAGGAGGCATTTAGCGCGACCTTCCTGC CCTGGGTGGCAGAGCTGCGCAGTTCGGCTGAGGCGGCAGGCAAGATTGAGATTCTGGTTGATGTCGCCACGTTGACGCAA CAGTAG
Upstream 100 bases:
>100_bases CAGTTCTTCATATACCCTCTCCCAAAATATGGTACGATGACCGTATGACGGCATATCAATTGTGATGTGCCAGATACCCG GTGTGGAGAGGAGTCTATTT
Downstream 100 bases:
>100_bases CTGCTGGGGCTTGACACTGAAGACCTGGGGTATCGCGATGCAGTCATCTCGCGATACCCTTTGTTGTTGTGGGAACTGCT GCGCATTCTCGTTCATCATG
Product: PpiC-type peptidyl-prolyl cis-trans isomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MSVDAFFRRLVWLGLVASLLLTACGAPSGPTVAGSPTTGNPQTPPSPEAGGTSGTVPAPDDAIARVGEEFILRRDFDRLY LPGADPQNLIDQMIDVELVVQAALAEGATVDEATIDSQVEQLRLAQAGGDEAQFLTFLQDNNIADEEELRRLLRRDYLIE QMLLKHTTAEQVRARHILVAATPEEAESRKATAEAILAELQGGADFAALARARSDDPGSAAQGGDLGWAPRGVYVEPFEE AVFSMQPGELRLVQTDFGWHIIEVTEGPEVRSFTDRALLETQAGQEAFSATFLPWVAELRSSAEAAGKIEILVDVATLTQ Q
Sequences:
>Translated_321_residues MSVDAFFRRLVWLGLVASLLLTACGAPSGPTVAGSPTTGNPQTPPSPEAGGTSGTVPAPDDAIARVGEEFILRRDFDRLY LPGADPQNLIDQMIDVELVVQAALAEGATVDEATIDSQVEQLRLAQAGGDEAQFLTFLQDNNIADEEELRRLLRRDYLIE QMLLKHTTAEQVRARHILVAATPEEAESRKATAEAILAELQGGADFAALARARSDDPGSAAQGGDLGWAPRGVYVEPFEE AVFSMQPGELRLVQTDFGWHIIEVTEGPEVRSFTDRALLETQAGQEAFSATFLPWVAELRSSAEAAGKIEILVDVATLTQ Q >Mature_320_residues SVDAFFRRLVWLGLVASLLLTACGAPSGPTVAGSPTTGNPQTPPSPEAGGTSGTVPAPDDAIARVGEEFILRRDFDRLYL PGADPQNLIDQMIDVELVVQAALAEGATVDEATIDSQVEQLRLAQAGGDEAQFLTFLQDNNIADEEELRRLLRRDYLIEQ MLLKHTTAEQVRARHILVAATPEEAESRKATAEAILAELQGGADFAALARARSDDPGSAAQGGDLGWAPRGVYVEPFEEA VFSMQPGELRLVQTDFGWHIIEVTEGPEVRSFTDRALLETQAGQEAFSATFLPWVAELRSSAEAAGKIEILVDVATLTQQ
Specific function: Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins [H]
COG id: COG0760
COG function: function code O; Parvulin-like peptidyl-prolyl isomerase
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PpiC domain [H]
Homologues:
Organism=Escherichia coli, GI1786238, Length=151, Percent_Identity=35.0993377483444, Blast_Score=80, Evalue=2e-16,
Paralogues:
None
Copy number: 400 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023059 - InterPro: IPR000297 - InterPro: IPR023058 - InterPro: IPR008880 [H]
Pfam domain/function: PF00639 Rotamase; PF05698 Trigger_C [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 34537; Mature: 34406
Theoretical pI: Translated: 4.08; Mature: 4.08
Prosite motif: PS01096 PPIC_PPIASE_1 ; PS50198 PPIC_PPIASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVDAFFRRLVWLGLVASLLLTACGAPSGPTVAGSPTTGNPQTPPSPEAGGTSGTVPAPD CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH DAIARVGEEFILRRDFDRLYLPGADPQNLIDQMIDVELVVQAALAEGATVDEATIDSQVE HHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH QLRLAQAGGDEAQFLTFLQDNNIADEEELRRLLRRDYLIEQMLLKHTTAEQVRARHILVA HHHHHHCCCCHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCEEEEE ATPEEAESRKATAEAILAELQGGADFAALARARSDDPGSAAQGGDLGWAPRGVYVEPFEE ECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCHHH AVFSMQPGELRLVQTDFGWHIIEVTEGPEVRSFTDRALLETQAGQEAFSATFLPWVAELR HHHCCCCCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH SSAEAAGKIEILVDVATLTQQ HHHHHCCCEEEEEEHHHHCCC >Mature Secondary Structure SVDAFFRRLVWLGLVASLLLTACGAPSGPTVAGSPTTGNPQTPPSPEAGGTSGTVPAPD CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH DAIARVGEEFILRRDFDRLYLPGADPQNLIDQMIDVELVVQAALAEGATVDEATIDSQVE HHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH QLRLAQAGGDEAQFLTFLQDNNIADEEELRRLLRRDYLIEQMLLKHTTAEQVRARHILVA HHHHHHCCCCHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCEEEEE ATPEEAESRKATAEAILAELQGGADFAALARARSDDPGSAAQGGDLGWAPRGVYVEPFEE ECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCHHH AVFSMQPGELRLVQTDFGWHIIEVTEGPEVRSFTDRALLETQAGQEAFSATFLPWVAELR HHHCCCCCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH SSAEAAGKIEILVDVATLTQQ HHHHHCCCEEEEEEHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA