Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
---|---|
Accession | NC_012032 |
Length | 5,268,950 |
Click here to switch to the map view.
The map label for this gene is ilvA [H]
Identifier: 222526037
GI number: 222526037
Start: 3440653
End: 3442170
Strand: Reverse
Name: ilvA [H]
Synonym: Chy400_2794
Alternate gene names: 222526037
Gene position: 3442170-3440653 (Counterclockwise)
Preceding gene: 222526038
Following gene: 222526036
Centisome position: 65.33
GC content: 57.25
Gene sequence:
>1518_bases ATGCCCAACCCTGATTTTACCTACGTTCAACGCATCCTGACCAGTCGGGTCTATGATGTTGTCAAAGAGACCCCATTGCA ACATGCGCCTCTTCTCAGCGCCCGCCTGGGAGCACAGATCTTTTTCAAACGTGAGGATCTGTTGCCCATCTTCTCTTTTA AGCTCCGTGGTGCCTATAACCGCATGGCTCATCTCAGTCCTGCCGAGAAAGAACGCGGCGTCATCACAGCCTCTGCCGGC AATCACGCCCAGGGAGTCGCCTTTTCTGGCCAGCAGCTCGGCGTGCGCACGCTGATTGTCATGCCGGCAACCACCCCAGA GATCAAGGTGGCAGCCTGTCGGCGTCGGAATGCAGAAGTTGTCCTGTACGGCGACAGCTATAGTGACGCTGAAGCGCACG CCTACCGCTTACAGCAAGAATTGGGCTTAACCTTCATCCATCCCTACGACGATCCGCTGGTGATTGCCGGTCAGGGTACG ATTGGGCTGGAGATTTCCCAACAGATGCGCGCCGAGCGATACCGTGTCTTCGTGCCGGTAGGTGGCGGCGGTCTGATTGC CGGCATCGCGATCTTCTTGAAGAGCATCAATCCCAATATTGAGATCATTGCCGTCGAGCCAGATGACTCTGATGCGATGT ACCAGAGCGTCCGGGCCGGCTATCGGGTCACCCTTGATCAGGTCGGAATCTTTGTTGATGGCGTGGCAGTTCGGCGGGTT GGCGAACACACCTTTGCGATTGTTCAGCGCTACGTCGATGATTTTGTGCGGGTGACAACCGACGAGGTCTGTGCGGCGAT CAAAGATGTCTTTGAGGACACCCGGGCCATTATGGAGCCAGCCGGCGCGCTGGCCGTCGCCGGGTTAAAGCGCTATATCG CCGAACACGGGGCCGATCTACCGGCAGTAGCCTTAACGTGTGGCGCTAACATGAACTTTGACCGTCTGCGCCACGTTGCC GAACGGGCCGAAATTGGCGAACGGCGTGAGGCGTTGTTTGCTGTGACCATCCCTGAACGACCCGGCTCATTCAAGCAATT TTGTCGCGTGATCGGACCACACAATATCACCGAATTCAACTACCGCTATGCACCGCGCCCCGAAGCCAATGTCTTTGTGG GTGTACAACTGACCAATGCCAATCAGCGCCACGAGCTGGCCGAACGTATGCGCAACGCCGGTTATACGGTGCTTGACCTG ACCAACGACGAGCTGGCAATCATTCATCTACGCCACATGGTTGGTGGACGAGCACCCGAAGCAACCGACGAACGGCTCTT CACCTTCGAGTTCCCGGAGCGACCGGGAGCGCTCTTGCAATTTCTCGAGTCGCTCGATGCCTCGTGGAACATCAGCCTCT TCCACTACCGCAACCATGGCAGCGCCCATGGGCGGGTACTGGCCGGTATTCAGGTGCCCGATGCCGATCTCGACCGTTTC TACGCCTCACTGGCTCGCCTGGGATACCCGTATCAGGAGCAGAGTGATAATCCGGCGTACCACCTGTTTTTGAAATGA
Upstream 100 bases:
>100_bases CCCGATCCATCTTCACTGATTGCCGACGCTGATCGCGCGCTCTACCTGGCCAAACAACAGGGGCGCAATCGCGTCTGCGG TGTACAGGAGCTGACCAACG
Downstream 100 bases:
>100_bases GCAACGCCCCCGGTAGAGCCGGGTGGCGGAGCGATTGAGCGCCACGATTGAACAGAATGCCCGTCGCACCAGATGGTGTG ACGGGCAGTGCAGAGTTTAT
Product: threonine dehydratase
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 505; Mature: 504
Protein sequence:
>505_residues MPNPDFTYVQRILTSRVYDVVKETPLQHAPLLSARLGAQIFFKREDLLPIFSFKLRGAYNRMAHLSPAEKERGVITASAG NHAQGVAFSGQQLGVRTLIVMPATTPEIKVAACRRRNAEVVLYGDSYSDAEAHAYRLQQELGLTFIHPYDDPLVIAGQGT IGLEISQQMRAERYRVFVPVGGGGLIAGIAIFLKSINPNIEIIAVEPDDSDAMYQSVRAGYRVTLDQVGIFVDGVAVRRV GEHTFAIVQRYVDDFVRVTTDEVCAAIKDVFEDTRAIMEPAGALAVAGLKRYIAEHGADLPAVALTCGANMNFDRLRHVA ERAEIGERREALFAVTIPERPGSFKQFCRVIGPHNITEFNYRYAPRPEANVFVGVQLTNANQRHELAERMRNAGYTVLDL TNDELAIIHLRHMVGGRAPEATDERLFTFEFPERPGALLQFLESLDASWNISLFHYRNHGSAHGRVLAGIQVPDADLDRF YASLARLGYPYQEQSDNPAYHLFLK
Sequences:
>Translated_505_residues MPNPDFTYVQRILTSRVYDVVKETPLQHAPLLSARLGAQIFFKREDLLPIFSFKLRGAYNRMAHLSPAEKERGVITASAG NHAQGVAFSGQQLGVRTLIVMPATTPEIKVAACRRRNAEVVLYGDSYSDAEAHAYRLQQELGLTFIHPYDDPLVIAGQGT IGLEISQQMRAERYRVFVPVGGGGLIAGIAIFLKSINPNIEIIAVEPDDSDAMYQSVRAGYRVTLDQVGIFVDGVAVRRV GEHTFAIVQRYVDDFVRVTTDEVCAAIKDVFEDTRAIMEPAGALAVAGLKRYIAEHGADLPAVALTCGANMNFDRLRHVA ERAEIGERREALFAVTIPERPGSFKQFCRVIGPHNITEFNYRYAPRPEANVFVGVQLTNANQRHELAERMRNAGYTVLDL TNDELAIIHLRHMVGGRAPEATDERLFTFEFPERPGALLQFLESLDASWNISLFHYRNHGSAHGRVLAGIQVPDADLDRF YASLARLGYPYQEQSDNPAYHLFLK >Mature_504_residues PNPDFTYVQRILTSRVYDVVKETPLQHAPLLSARLGAQIFFKREDLLPIFSFKLRGAYNRMAHLSPAEKERGVITASAGN HAQGVAFSGQQLGVRTLIVMPATTPEIKVAACRRRNAEVVLYGDSYSDAEAHAYRLQQELGLTFIHPYDDPLVIAGQGTI GLEISQQMRAERYRVFVPVGGGGLIAGIAIFLKSINPNIEIIAVEPDDSDAMYQSVRAGYRVTLDQVGIFVDGVAVRRVG EHTFAIVQRYVDDFVRVTTDEVCAAIKDVFEDTRAIMEPAGALAVAGLKRYIAEHGADLPAVALTCGANMNFDRLRHVAE RAEIGERREALFAVTIPERPGSFKQFCRVIGPHNITEFNYRYAPRPEANVFVGVQLTNANQRHELAERMRNAGYTVLDLT NDELAIIHLRHMVGGRAPEATDERLFTFEFPERPGALLQFLESLDASWNISLFHYRNHGSAHGRVLAGIQVPDADLDRFY ASLARLGYPYQEQSDNPAYHLFLK
Specific function: Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine, followed by rehydration and liberation of ammonia [H]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI11345492, Length=278, Percent_Identity=35.9712230215827, Blast_Score=162, Evalue=9e-40, Organism=Homo sapiens, GI33469958, Length=321, Percent_Identity=27.1028037383178, Blast_Score=88, Evalue=2e-17, Organism=Homo sapiens, GI19923959, Length=316, Percent_Identity=27.2151898734177, Blast_Score=78, Evalue=2e-14, Organism=Escherichia coli, GI1790207, Length=499, Percent_Identity=51.7034068136273, Blast_Score=494, Evalue=1e-141, Organism=Escherichia coli, GI1789505, Length=321, Percent_Identity=38.6292834890966, Blast_Score=185, Evalue=6e-48, Organism=Caenorhabditis elegans, GI71991565, Length=331, Percent_Identity=32.9305135951662, Blast_Score=157, Evalue=1e-38, Organism=Caenorhabditis elegans, GI17508781, Length=279, Percent_Identity=30.8243727598566, Blast_Score=139, Evalue=3e-33, Organism=Caenorhabditis elegans, GI17537387, Length=337, Percent_Identity=30.5637982195846, Blast_Score=133, Evalue=3e-31, Organism=Saccharomyces cerevisiae, GI6320930, Length=519, Percent_Identity=47.3988439306358, Blast_Score=463, Evalue=1e-131, Organism=Saccharomyces cerevisiae, GI6322631, Length=275, Percent_Identity=37.8181818181818, Blast_Score=170, Evalue=4e-43, Organism=Saccharomyces cerevisiae, GI6319788, Length=319, Percent_Identity=24.1379310344828, Blast_Score=77, Evalue=6e-15, Organism=Drosophila melanogaster, GI21355833, Length=315, Percent_Identity=33.3333333333333, Blast_Score=143, Evalue=2e-34, Organism=Drosophila melanogaster, GI24645328, Length=251, Percent_Identity=32.2709163346614, Blast_Score=98, Evalue=2e-20,
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR005787 - InterPro: IPR001721 [H]
Pfam domain/function: PF00291 PALP; PF00585 Thr_dehydrat_C [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 56269; Mature: 56138
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNPDFTYVQRILTSRVYDVVKETPLQHAPLLSARLGAQIFFKREDLLPIFSFKLRGAYN CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCEEEEECCCCCHHHHHHHCCHHH RMAHLSPAEKERGVITASAGNHAQGVAFSGQQLGVRTLIVMPATTPEIKVAACRRRNAEV HHHCCCCCHHHCCEEEECCCCCCCCEEECCCCCCEEEEEEECCCCCCEEHHHHHCCCCEE VLYGDSYSDAEAHAYRLQQELGLTFIHPYDDPLVIAGQGTIGLEISQQMRAERYRVFVPV EEECCCCCCHHHHHHHHHHHCCCEEECCCCCCEEEECCCCEEEEEHHHHCCCCEEEEEEE GGGGLIAGIAIFLKSINPNIEIIAVEPDDSDAMYQSVRAGYRVTLDQVGIFVDGVAVRRV CCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCEEEHHHHCEEECCHHHHHH GEHTFAIVQRYVDDFVRVTTDEVCAAIKDVFEDTRAIMEPAGALAVAGLKRYIAEHGADL HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC PAVALTCGANMNFDRLRHVAERAEIGERREALFAVTIPERPGSFKQFCRVIGPHNITEFN CEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCEECC YRYAPRPEANVFVGVQLTNANQRHELAERMRNAGYTVLDLTNDELAIIHLRHMVGGRAPE EEECCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCEEEEEEEHHHCCCCCC ATDERLFTFEFPERPGALLQFLESLDASWNISLFHYRNHGSAHGRVLAGIQVPDADLDRF CCCCEEEEEECCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCCCEEEEEEECCCCHHHHH YASLARLGYPYQEQSDNPAYHLFLK HHHHHHHCCCCCCCCCCCCEEEEEC >Mature Secondary Structure PNPDFTYVQRILTSRVYDVVKETPLQHAPLLSARLGAQIFFKREDLLPIFSFKLRGAYN CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCEEEEECCCCCHHHHHHHCCHHH RMAHLSPAEKERGVITASAGNHAQGVAFSGQQLGVRTLIVMPATTPEIKVAACRRRNAEV HHHCCCCCHHHCCEEEECCCCCCCCEEECCCCCCEEEEEEECCCCCCEEHHHHHCCCCEE VLYGDSYSDAEAHAYRLQQELGLTFIHPYDDPLVIAGQGTIGLEISQQMRAERYRVFVPV EEECCCCCCHHHHHHHHHHHCCCEEECCCCCCEEEECCCCEEEEEHHHHCCCCEEEEEEE GGGGLIAGIAIFLKSINPNIEIIAVEPDDSDAMYQSVRAGYRVTLDQVGIFVDGVAVRRV CCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCEEEHHHHCEEECCHHHHHH GEHTFAIVQRYVDDFVRVTTDEVCAAIKDVFEDTRAIMEPAGALAVAGLKRYIAEHGADL HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC PAVALTCGANMNFDRLRHVAERAEIGERREALFAVTIPERPGSFKQFCRVIGPHNITEFN CEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHCCCCCEECC YRYAPRPEANVFVGVQLTNANQRHELAERMRNAGYTVLDLTNDELAIIHLRHMVGGRAPE EEECCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCEEEEECCCCEEEEEEEHHHCCCCCC ATDERLFTFEFPERPGALLQFLESLDASWNISLFHYRNHGSAHGRVLAGIQVPDADLDRF CCCCEEEEEECCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCCCEEEEEEECCCCHHHHH YASLARLGYPYQEQSDNPAYHLFLK HHHHHHHCCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA