Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is 222526036
Identifier: 222526036
GI number: 222526036
Start: 3439744
End: 3440178
Strand: Reverse
Name: 222526036
Synonym: Chy400_2793
Alternate gene names: NA
Gene position: 3440178-3439744 (Counterclockwise)
Preceding gene: 222526037
Following gene: 222526035
Centisome position: 65.29
GC content: 56.09
Gene sequence:
>435_bases ATGGCATCAGAACCAAACGAAGGCTTCACCGCCGAAGAGCGGGCGGCAATGCAAGAGCGTGCCCGCGAGCTACGCACTGA ACGGCAGGCCAAAAAAGGGAAGGCGGACGGCGAGCGTGATGTTCTGACCAGAATTGCCGAAATGCCTGAGCCGGATCGCA CGATAGCCGGGCGCATTCATGCCATCATCAAAACAGTTGCCCCAGAGCTGACACCGAAAACCTGGTACGGTATGCCGGCG TATGCCAGAGGCGGCAGTGTCATCTGCTTCTTCCAAAGTGCCAACAAATTCAAAACCCGCTATGCGACCCTTGGCTTCAC TGATACCGCGCACCTTGACGAAGATGACATGTGGCCGGTAGCGTTTGCGTTAAAGGAGCTAACCCCAGCCGTTGAAGCAC AGATCAGCGCGTTGATCAAAAAGGCAGTACGGTGA
Upstream 100 bases:
>100_bases AGATTCTCCTCACGACAACATATCACACCTTGACAAGATATGCCTGCCGTGATATTATCGATTAGAACATTTATTCTATT GTACAATAAACAGAGAGACT
Downstream 100 bases:
>100_bases ACAACACTGATACACGGGCAGCAGTTATCACGGCGAGAACGTAATCAGGTTTGTCCAGACATATCATCGCAAAGTGACTG GTAACCCAATCCGGTAAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MASEPNEGFTAEERAAMQERARELRTERQAKKGKADGERDVLTRIAEMPEPDRTIAGRIHAIIKTVAPELTPKTWYGMPA YARGGSVICFFQSANKFKTRYATLGFTDTAHLDEDDMWPVAFALKELTPAVEAQISALIKKAVR
Sequences:
>Translated_144_residues MASEPNEGFTAEERAAMQERARELRTERQAKKGKADGERDVLTRIAEMPEPDRTIAGRIHAIIKTVAPELTPKTWYGMPA YARGGSVICFFQSANKFKTRYATLGFTDTAHLDEDDMWPVAFALKELTPAVEAQISALIKKAVR >Mature_143_residues ASEPNEGFTAEERAAMQERARELRTERQAKKGKADGERDVLTRIAEMPEPDRTIAGRIHAIIKTVAPELTPKTWYGMPAY ARGGSVICFFQSANKFKTRYATLGFTDTAHLDEDDMWPVAFALKELTPAVEAQISALIKKAVR
Specific function: Unknown
COG id: COG5646
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16071; Mature: 15939
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASEPNEGFTAEERAAMQERARELRTERQAKKGKADGERDVLTRIAEMPEPDRTIAGRIH CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHH AIIKTVAPELTPKTWYGMPAYARGGSVICFFQSANKFKTRYATLGFTDTAHLDEDDMWPV HHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCHHH AFALKELTPAVEAQISALIKKAVR HHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ASEPNEGFTAEERAAMQERARELRTERQAKKGKADGERDVLTRIAEMPEPDRTIAGRIH CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHH AIIKTVAPELTPKTWYGMPAYARGGSVICFFQSANKFKTRYATLGFTDTAHLDEDDMWPV HHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCHHH AFALKELTPAVEAQISALIKKAVR HHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA