Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is 222525958
Identifier: 222525958
GI number: 222525958
Start: 3349646
End: 3350446
Strand: Direct
Name: 222525958
Synonym: Chy400_2714
Alternate gene names: NA
Gene position: 3349646-3350446 (Clockwise)
Preceding gene: 222525953
Following gene: 222525969
Centisome position: 63.57
GC content: 58.05
Gene sequence:
>801_bases ATGAGCGAGCAGTCGGCTGTTGTGCCTGCCATCGTCTACCCCGATAGTGACGGCATGCCAATCGCTGACAATACCAGACA ATTCCGGGCAATCGTCACCATTCAGGGGAATCTCGATGCCATCTTCCGTGAGCGGGACGATGTGTTCGTGGCGGGTGATC TGCTCTGGTATCCGGTTGAAGGCCGTCCTGATATTCGGCGAGCGCCCGATGTCATGGTGGTGTTTGGCCGGCCAAAAGGG GATCGCGGATCGTATCGCCAATGGGAAGAAAACGGGATTGCGCCCCAGGTCGTGTTTGAGGTTTTGTCGCCAGAGAATAC GCTAACCGAACGGGCGGCGAAGCAGGAGTTTTACGACATCTATGGGGTGGACGAGTATTACCTGTACGATCCGGAACATG GCGATATGAGCGGCTGGCAACGGATTGACGGTCGGTTGCGGGTGATCAACGAACTAGATGGCTGGGTCAGTCCGCGTCTG GGAATCACGTTCAAGCGAACGGATCGCGGTATGCAGTTGTACTGGCCGGACGGTCGTCCATTTCTGAGTTTCGTGGAGTT GCAGGCACAGGCCGAACAAGAGCGCCAACGAGCCGAAGAGGAGCGTCAGCGGGCTGAACAAGAGCGCCAACGAGCCGAAG AGGAGCGTCAGCGGGCTGAACAAGAGCACCAACGAGCCGAAGAGGAGCGTCAGCGGGCTGAACAAGAGCGCCAACGAGCC GAAGAGGAGCGTCAGCGGGCTGAGCGATTGGCGGCACGGTTACGTGCTTTGGGTATTGATCCAGATGCAGAACAGGAGTG A
Upstream 100 bases:
>100_bases GTCTGTAATGGATGATAGTTTCCGGTGTCGCTGATACTGGACAATCACCAAAAACACCTGTATAATTATCGTACAAATGT TCGATATAAGGAGGTGAATG
Downstream 100 bases:
>100_bases ATGTTGCCGGTGGGGTGCGACTGGCGGGTCAATGGTGATGAGGTTCATCCTGTCGTTGAGAAGCTGGCAATGAGATAGCG TGCCCCGGTGTTGGTAGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MSEQSAVVPAIVYPDSDGMPIADNTRQFRAIVTIQGNLDAIFRERDDVFVAGDLLWYPVEGRPDIRRAPDVMVVFGRPKG DRGSYRQWEENGIAPQVVFEVLSPENTLTERAAKQEFYDIYGVDEYYLYDPEHGDMSGWQRIDGRLRVINELDGWVSPRL GITFKRTDRGMQLYWPDGRPFLSFVELQAQAEQERQRAEEERQRAEQERQRAEEERQRAEQEHQRAEEERQRAEQERQRA EEERQRAERLAARLRALGIDPDAEQE
Sequences:
>Translated_266_residues MSEQSAVVPAIVYPDSDGMPIADNTRQFRAIVTIQGNLDAIFRERDDVFVAGDLLWYPVEGRPDIRRAPDVMVVFGRPKG DRGSYRQWEENGIAPQVVFEVLSPENTLTERAAKQEFYDIYGVDEYYLYDPEHGDMSGWQRIDGRLRVINELDGWVSPRL GITFKRTDRGMQLYWPDGRPFLSFVELQAQAEQERQRAEEERQRAEQERQRAEEERQRAEQEHQRAEEERQRAEQERQRA EEERQRAERLAARLRALGIDPDAEQE >Mature_265_residues SEQSAVVPAIVYPDSDGMPIADNTRQFRAIVTIQGNLDAIFRERDDVFVAGDLLWYPVEGRPDIRRAPDVMVVFGRPKGD RGSYRQWEENGIAPQVVFEVLSPENTLTERAAKQEFYDIYGVDEYYLYDPEHGDMSGWQRIDGRLRVINELDGWVSPRLG ITFKRTDRGMQLYWPDGRPFLSFVELQAQAEQERQRAEEERQRAEQERQRAEEERQRAEQEHQRAEEERQRAEQERQRAE EERQRAERLAARLRALGIDPDAEQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31227; Mature: 31096
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQSAVVPAIVYPDSDGMPIADNTRQFRAIVTIQGNLDAIFRERDDVFVAGDLLWYPVE CCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEECCHHHHHHCCCCEEEECCEEEEECC GRPDIRRAPDVMVVFGRPKGDRGSYRQWEENGIAPQVVFEVLSPENTLTERAAKQEFYDI CCCCCCCCCCEEEEEECCCCCCCCCCHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH YGVDEYYLYDPEHGDMSGWQRIDGRLRVINELDGWVSPRLGITFKRTDRGMQLYWPDGRP CCCCEEEEECCCCCCCCHHHHHCCHHHHHHHHCCCCCCCCCEEEEECCCCCEEECCCCCH FLSFVELQAQAEQERQRAEEERQRAEQERQRAEEERQRAEQEHQRAEEERQRAEQERQRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEERQRAERLAARLRALGIDPDAEQE HHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SEQSAVVPAIVYPDSDGMPIADNTRQFRAIVTIQGNLDAIFRERDDVFVAGDLLWYPVE CCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEECCHHHHHHCCCCEEEECCEEEEECC GRPDIRRAPDVMVVFGRPKGDRGSYRQWEENGIAPQVVFEVLSPENTLTERAAKQEFYDI CCCCCCCCCCEEEEEECCCCCCCCCCHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH YGVDEYYLYDPEHGDMSGWQRIDGRLRVINELDGWVSPRLGITFKRTDRGMQLYWPDGRP CCCCEEEEECCCCCCCCHHHHHCCHHHHHHHHCCCCCCCCCEEEEECCCCCEEECCCCCH FLSFVELQAQAEQERQRAEEERQRAEQERQRAEEERQRAEQEHQRAEEERQRAEQERQRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEERQRAERLAARLRALGIDPDAEQE HHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA