Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is 222525969
Identifier: 222525969
GI number: 222525969
Start: 3362741
End: 3363217
Strand: Direct
Name: 222525969
Synonym: Chy400_2725
Alternate gene names: NA
Gene position: 3362741-3363217 (Clockwise)
Preceding gene: 222525958
Following gene: 222525970
Centisome position: 63.82
GC content: 53.46
Gene sequence:
>477_bases ATGACCCTCTATCCTCCTCCAGCTCAGCCGCAATCAGGTGGAACGCTGCGTTGGGTGTTGATCGGAATTGGTGCAGGATT GTTGTCGTTGGTGCTCTGCTGTGCACTGTTAGCGTTTGGTGGGTGGCAATTATTTAGTGGACTTGTAGATGAAACATCGG CCATGCAGCAGGTTGTGCGCGATTTTATGGATGCAGGCCGAAGGCAGGATATTGCGGCAGCCGAGGCTCTCTTTGCTGAT GCGGGCAGTGTGTCTGTTTCACGTGACGATTTGGAACGTCTCTTCGCTAACCGCCAGCTCTTCCGCGAAGTTGAAGGCAT GTCGTTGCGCAGCTTCAATATCCGTACCGACACGGAGGGAGGCACGGCTGAAATAGCCGGTACTCTGAACTATACCGATG GCGGAACCCAACCCTTTTCAGCGCGATTGCTCAAAGAGGGTGATCATTGGCGACTGGTGCGGATCGATTTTCGTTAA
Upstream 100 bases:
>100_bases TTATCAACTCCTAACTTCCCATCACCAGAAACAATCTGGACGAAACCGTTTCATTTGCTATCATATACGTAGACTACTGC GACAGCTTCAGGAGATGATC
Downstream 100 bases:
>100_bases CTGATGAAAGAGAGTGCAATGGCGCAGACACAACAGCCTCTGGCCGAGGTGTTTGGTTATCAAATCACCGATCAATCTGA GGCAGCGGCGCGCTGTCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MTLYPPPAQPQSGGTLRWVLIGIGAGLLSLVLCCALLAFGGWQLFSGLVDETSAMQQVVRDFMDAGRRQDIAAAEALFAD AGSVSVSRDDLERLFANRQLFREVEGMSLRSFNIRTDTEGGTAEIAGTLNYTDGGTQPFSARLLKEGDHWRLVRIDFR
Sequences:
>Translated_158_residues MTLYPPPAQPQSGGTLRWVLIGIGAGLLSLVLCCALLAFGGWQLFSGLVDETSAMQQVVRDFMDAGRRQDIAAAEALFAD AGSVSVSRDDLERLFANRQLFREVEGMSLRSFNIRTDTEGGTAEIAGTLNYTDGGTQPFSARLLKEGDHWRLVRIDFR >Mature_157_residues TLYPPPAQPQSGGTLRWVLIGIGAGLLSLVLCCALLAFGGWQLFSGLVDETSAMQQVVRDFMDAGRRQDIAAAEALFADA GSVSVSRDDLERLFANRQLFREVEGMSLRSFNIRTDTEGGTAEIAGTLNYTDGGTQPFSARLLKEGDHWRLVRIDFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17285; Mature: 17154
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLYPPPAQPQSGGTLRWVLIGIGAGLLSLVLCCALLAFGGWQLFSGLVDETSAMQQVVR CCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH DFMDAGRRQDIAAAEALFADAGSVSVSRDDLERLFANRQLFREVEGMSLRSFNIRTDTEG HHHHCCCCCHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC GTAEIAGTLNYTDGGTQPFSARLLKEGDHWRLVRIDFR CCEEEEEEEECCCCCCCCHHHHHHCCCCCEEEEEEECC >Mature Secondary Structure TLYPPPAQPQSGGTLRWVLIGIGAGLLSLVLCCALLAFGGWQLFSGLVDETSAMQQVVR CCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH DFMDAGRRQDIAAAEALFADAGSVSVSRDDLERLFANRQLFREVEGMSLRSFNIRTDTEG HHHHCCCCCHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCC GTAEIAGTLNYTDGGTQPFSARLLKEGDHWRLVRIDFR CCEEEEEEEECCCCCCCCHHHHHHCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA