Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is 222525952
Identifier: 222525952
GI number: 222525952
Start: 3342939
End: 3343220
Strand: Direct
Name: 222525952
Synonym: Chy400_2708
Alternate gene names: NA
Gene position: 3342939-3343220 (Clockwise)
Preceding gene: 222525951
Following gene: 222525953
Centisome position: 63.45
GC content: 70.92
Gene sequence:
>282_bases ATGGGCGTGCTCCGGGTGGCTCCCGTAGAGGTTATTCCCGCCCCCCCTCCCGGCCTCCCCCCGCTGGGGGGAGGAGACGA GAGTGTTGTTCCCGCTGGGGGGAGGAGACGAGCGGATGCCCCCGCTGGGGGGAGGAGACGAGCGGGTTGCCCCCGCTGGG GGGAGGAGACGAGCGGATGCCCCCGCTGGGGGGAGGAGACGAGAGCATACCCCCGCCCCCAGCGGGGGCGGGTTGGGGTG GGGGTGTCAGTCAATCGCATCGGCTCTTCGACATTGACATAA
Upstream 100 bases:
>100_bases AGACGAGCGGGTTGCTCCCGCTGGGGGGAGGAGACGAGAGTGTTGTTCCCGCTGGGGGGAGGCGACGAGCGGGTGCTTCT CCCAGCGGGGGAGTGGGGAG
Downstream 100 bases:
>100_bases AACTCTCTGGAGAGGGATGGCCGGCGATAAGCTACCAGAGGGTCGGGATAGGCAGGGAGTGACGAGTCGCCCGGATGCAG GATCGGCCATATCAAGGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MGVLRVAPVEVIPAPPPGLPPLGGGDESVVPAGGRRRADAPAGGRRRAGCPRWGEETSGCPRWGEETRAYPRPQRGRVGV GVSVNRIGSSTLT
Sequences:
>Translated_93_residues MGVLRVAPVEVIPAPPPGLPPLGGGDESVVPAGGRRRADAPAGGRRRAGCPRWGEETSGCPRWGEETRAYPRPQRGRVGV GVSVNRIGSSTLT >Mature_92_residues GVLRVAPVEVIPAPPPGLPPLGGGDESVVPAGGRRRADAPAGGRRRAGCPRWGEETSGCPRWGEETRAYPRPQRGRVGVG VSVNRIGSSTLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9636; Mature: 9505
Theoretical pI: Translated: 11.73; Mature: 11.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVLRVAPVEVIPAPPPGLPPLGGGDESVVPAGGRRRADAPAGGRRRAGCPRWGEETSGC CCCCCCCCEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PRWGEETRAYPRPQRGRVGVGVSVNRIGSSTLT CCCCCCCCCCCCCCCCEEECCEECCCCCCCCCC >Mature Secondary Structure GVLRVAPVEVIPAPPPGLPPLGGGDESVVPAGGRRRADAPAGGRRRAGCPRWGEETSGC CCCCCCCEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PRWGEETRAYPRPQRGRVGVGVSVNRIGSSTLT CCCCCCCCCCCCCCCCEEECCEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA