Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is hmuT [H]

Identifier: 222525864

GI number: 222525864

Start: 3253082

End: 3254146

Strand: Direct

Name: hmuT [H]

Synonym: Chy400_2617

Alternate gene names: 222525864

Gene position: 3253082-3254146 (Clockwise)

Preceding gene: 222525863

Following gene: 222525865

Centisome position: 61.74

GC content: 57.75

Gene sequence:

>1065_bases
ATGTGGCCGAAGCTCGTTAAGTCGCTAACCCTTGCTCTCGTTCTGGTTTTGCTGAGTGCTTGTGGAGCCGGATCAACGGC
AACAGTACCGACAGCGGTACCGGAACCAACGGCGATACCAACTGCTATTCCTGCGCCGACTGCTGCTCCTGTGCCAACGA
CAGCGCCGGTCGCTGAACCTGAACCGACCAGTGCTGTACTTACGCCTGTTTTACCGGCAACGGTGACCGATTATCAGGGT
GAGACGGTGGTGGTTGAGTCCGTTGACCGGATTGTCAGTCTTACCGGCGATATTACCGAGATCATCTTCGCGCTGGGAAT
GGGTGACTATATCGTTGGTGTGGACTCCAGTGCGACGTATCCTGCCGAGAAGACCAAGTCCCTGCCTAACATTGGCTATC
AACGGCGTTTGAATGCCGAAGGTATTCTGGCGTTGAACCCGACGCTGGTGATTGGTGATGAGGCTGCCGGCCCACCGGAG
GCGCTGGCGCAGATTCGTTCTGCGGGTGTTCCGGTAGCGTTGGTGGCTGATCCGCCGACGATGGATGCGCCGATGCAGAA
GATTCTCTTTGTGGCCCGCGCCCTCGGCATTCCTGAACGAGGATACGAGCTTGCCGGCCAGGTGGAGGCAGAGATTGCGC
GTGCCCGGGCTGATGCTGCAACGCTACCTCGACCACCCCGTGTATTGTTCCTCTATCTGCGGGGGACTGATGTTCAGCAG
GTGGCAGGTGCCAATACTGCGATTGATGCCATGATTACCGCCGCCGGTGGTGTCAACGCGGCAACTGAGGCCGGTATCGT
AAACTACGCGCCGTTGAGTGCAGAGGTTGTAATCGCTGCGCAGCCTGATGTCATTCTGGTGCTCACTAAAGGTCTGGAGT
CGGTTGGTGGTGTTGATGGTCTCTTGCAAATTCCCGGTCTTGCCGACACTCCAGCCGGTCAACAGCGTCGGGTGGTAGAC
TTCGATGATCTCTATCTGTTGGGGATGGGGCCACGCACCGGTCAGGCATTGGCCGATCTGGTGGCAGCATTCAAGGATGC
TGTAGCACAAACGGGTGGATCATGA

Upstream 100 bases:

>100_bases
GATGTGTACGGTGTGCCGGTTACGGTGCAACCGCATCCGCGAGCGGCAACACCTCTTGTTTTGAGCTTACCAGAAGATAT
GACGGGGAGTAGATATACCT

Downstream 100 bases:

>100_bases
GTGTGACGTCCGTTGCTCCTGGCCTCCGCTTACGTTTTGCCGGGCGGGGCTGGTTATTGCCGATACTGGCAGTGGTCTTG
TCTGTAGCATTCTTGTTGGG

Product: periplasmic binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MWPKLVKSLTLALVLVLLSACGAGSTATVPTAVPEPTAIPTAIPAPTAAPVPTTAPVAEPEPTSAVLTPVLPATVTDYQG
ETVVVESVDRIVSLTGDITEIIFALGMGDYIVGVDSSATYPAEKTKSLPNIGYQRRLNAEGILALNPTLVIGDEAAGPPE
ALAQIRSAGVPVALVADPPTMDAPMQKILFVARALGIPERGYELAGQVEAEIARARADAATLPRPPRVLFLYLRGTDVQQ
VAGANTAIDAMITAAGGVNAATEAGIVNYAPLSAEVVIAAQPDVILVLTKGLESVGGVDGLLQIPGLADTPAGQQRRVVD
FDDLYLLGMGPRTGQALADLVAAFKDAVAQTGGS

Sequences:

>Translated_354_residues
MWPKLVKSLTLALVLVLLSACGAGSTATVPTAVPEPTAIPTAIPAPTAAPVPTTAPVAEPEPTSAVLTPVLPATVTDYQG
ETVVVESVDRIVSLTGDITEIIFALGMGDYIVGVDSSATYPAEKTKSLPNIGYQRRLNAEGILALNPTLVIGDEAAGPPE
ALAQIRSAGVPVALVADPPTMDAPMQKILFVARALGIPERGYELAGQVEAEIARARADAATLPRPPRVLFLYLRGTDVQQ
VAGANTAIDAMITAAGGVNAATEAGIVNYAPLSAEVVIAAQPDVILVLTKGLESVGGVDGLLQIPGLADTPAGQQRRVVD
FDDLYLLGMGPRTGQALADLVAAFKDAVAQTGGS
>Mature_354_residues
MWPKLVKSLTLALVLVLLSACGAGSTATVPTAVPEPTAIPTAIPAPTAAPVPTTAPVAEPEPTSAVLTPVLPATVTDYQG
ETVVVESVDRIVSLTGDITEIIFALGMGDYIVGVDSSATYPAEKTKSLPNIGYQRRLNAEGILALNPTLVIGDEAAGPPE
ALAQIRSAGVPVALVADPPTMDAPMQKILFVARALGIPERGYELAGQVEAEIARARADAATLPRPPRVLFLYLRGTDVQQ
VAGANTAIDAMITAAGGVNAATEAGIVNYAPLSAEVVIAAQPDVILVLTKGLESVGGVDGLLQIPGLADTPAGQQRRVVD
FDDLYLLGMGPRTGQALADLVAAFKDAVAQTGGS

Specific function: Part of the binding-protein-dependent transport system for hemin [H]

COG id: COG4558

COG function: function code P; ABC-type hemin transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 36161; Mature: 36161

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWPKLVKSLTLALVLVLLSACGAGSTATVPTAVPEPTAIPTAIPAPTAAPVPTTAPVAEP
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EPTSAVLTPVLPATVTDYQGETVVVESVDRIVSLTGDITEIIFALGMGDYIVGVDSSATY
CCCCHHHCCCCCCEECCCCCCEEEEEHHHHHHHHCCHHHHHHHHHCCCCEEEECCCCCCC
PAEKTKSLPNIGYQRRLNAEGILALNPTLVIGDEAAGPPEALAQIRSAGVPVALVADPPT
CHHHHCCCCCCCHHHCCCCCCEEEECCEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCC
MDAPMQKILFVARALGIPERGYELAGQVEAEIARARADAATLPRPPRVLFLYLRGTDVQQ
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHCCCCCCCEEEEEEECCCHHH
VAGANTAIDAMITAAGGVNAATEAGIVNYAPLSAEVVIAAQPDVILVLTKGLESVGGVDG
HHCCCHHHHHHEECCCCCCCHHHCCCEEECCCCEEEEEEECCCEEEEEECCHHHHCCCCC
LLQIPGLADTPAGQQRRVVDFDDLYLLGMGPRTGQALADLVAAFKDAVAQTGGS
EEECCCCCCCCCCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MWPKLVKSLTLALVLVLLSACGAGSTATVPTAVPEPTAIPTAIPAPTAAPVPTTAPVAEP
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
EPTSAVLTPVLPATVTDYQGETVVVESVDRIVSLTGDITEIIFALGMGDYIVGVDSSATY
CCCCHHHCCCCCCEECCCCCCEEEEEHHHHHHHHCCHHHHHHHHHCCCCEEEECCCCCCC
PAEKTKSLPNIGYQRRLNAEGILALNPTLVIGDEAAGPPEALAQIRSAGVPVALVADPPT
CHHHHCCCCCCCHHHCCCCCCEEEECCEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCC
MDAPMQKILFVARALGIPERGYELAGQVEAEIARARADAATLPRPPRVLFLYLRGTDVQQ
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHCCCCCCCEEEEEEECCCHHH
VAGANTAIDAMITAAGGVNAATEAGIVNYAPLSAEVVIAAQPDVILVLTKGLESVGGVDG
HHCCCHHHHHHEECCCCCCCHHHCCCEEECCCCEEEEEEECCCEEEEEECCHHHHCCCCC
LLQIPGLADTPAGQQRRVVDFDDLYLLGMGPRTGQALADLVAAFKDAVAQTGGS
EEECCCCCCCCCCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9026634; 11586360; 12142430 [H]