Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222524765

Identifier: 222524765

GI number: 222524765

Start: 1887523

End: 1888794

Strand: Direct

Name: 222524765

Synonym: Chy400_1492

Alternate gene names: NA

Gene position: 1887523-1888794 (Clockwise)

Preceding gene: 222524763

Following gene: 222524766

Centisome position: 35.82

GC content: 49.29

Gene sequence:

>1272_bases
ATGACATCACCTAAACTTATTGCGATCAAACACCACTTACACCATGTCACCTCACCAGCAATGCTCATCCTCATTCGAGG
TTTTGTAGCGGTAGCTGCTGGCTCACTTCTGGGAAGGATACTCAGCGCAGTTGCCGGTATTTTACTCGTTCGTTATTTTG
AGGGGCCGGCCTTGTATGGCCAATATGCGACACTAGTTACCACTCTGACCTTGATATCAAACCTGCTGGGGCTTGGGTTT
GACACGTGGTTACTCCGCGAAGGTGGTCGAGACCCCAGCCTGTTGTCGTTCAATGCTCGCCGCCTGCTAGTCCTGAAATT
CGGTGCAGCCAGCATCCTTATAGGGGCATTAGTAGTGGCCTGGAACCAGACGGATCTGAGTTGGCTCATCATCGTCGGCA
TGCTTGGCATCATTGCCGAGAGCTACCTTAATACCGGTTACGTAATGTTCCATGCACTCAGTCGAAATGGGCTGGTCGCT
GTTTTACAGAGTCTCGACGCCTTGCTGGTAGTGGTGCTGATACTCCTGTTGATGAACTGGCCACCCCAGGTAGCGACACT
GGTTGTCGGCCAGAGCATTGTAAGTGGTACTGTCCTGATAATTGCGGCAATATTACTGGCCAACCACTGGCGTGGAGCAT
GGCGGCCTCTACGATTGGGGCAGTTGATACGGAGTGCCGGTTTTTTTGTTTTAGCCGATGTACTGGCAAATATCTATTCT
CAGGCTCAAATCGCCATTCTGGCATTGTTTACCAGTGATGTAGATGTTGGTATATTTCGCTCTGCGATCAATCTCATCAC
TATGAGTTTTCTGGTACCTATGGCAATGTTCAATGTAAGCCTACCTCTATTGAGTCGCCAAAACATTGAACGACGACAGA
GGTATCATATAATTTTCGGCATATTTGGTTTAGCTACCTGTTATGGAATCATTGCCTTGTTCGGTTTTTGGTGGTTTGGC
GCTGACCTGCTCCGCCTCTTCTACGGCAATAAATACGAGGCAGTGGTTCCTTTGCTGACACCACTTAGCCTGGTACCGCT
CTTCAAATCCCTCAGTTTCGTTGCAGTTGCCATTATGCTGGCACTAAGTGCGCAACGCTTGCGCGTTGTTATGCAGAGTA
TCGTTGTCATCCTCAGCCTGTTGTTAGGTCTGATCATCATCCCCTCCTTCGGTGTCACGGGTGCAACTGCAACGTATATC
GTGGTTGAGCTAGCACTTTGTGTGTTCTATTGGATCGGCGCACTCTACACACTGCACAAGACACGCATATGA

Upstream 100 bases:

>100_bases
GTTGACAAAACTTACTTATCGAATTTATCAACCGGAACTCAAAGAAACCTCTCAAACCGAAACGAAGATTTACTGAGCAA
CACATCAGACAATAATAATA

Downstream 100 bases:

>100_bases
AGATCGTTTTGATCAATAATCACTCAGTGTTAAATGCTGGTGATTATGCAATTCTGCTCCAGACTCTCAATCTGCTTCAC
GCGGCTTTCCCGCAAGCTGA

Product: polysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 422

Protein sequence:

>423_residues
MTSPKLIAIKHHLHHVTSPAMLILIRGFVAVAAGSLLGRILSAVAGILLVRYFEGPALYGQYATLVTTLTLISNLLGLGF
DTWLLREGGRDPSLLSFNARRLLVLKFGAASILIGALVVAWNQTDLSWLIIVGMLGIIAESYLNTGYVMFHALSRNGLVA
VLQSLDALLVVVLILLLMNWPPQVATLVVGQSIVSGTVLIIAAILLANHWRGAWRPLRLGQLIRSAGFFVLADVLANIYS
QAQIAILALFTSDVDVGIFRSAINLITMSFLVPMAMFNVSLPLLSRQNIERRQRYHIIFGIFGLATCYGIIALFGFWWFG
ADLLRLFYGNKYEAVVPLLTPLSLVPLFKSLSFVAVAIMLALSAQRLRVVMQSIVVILSLLLGLIIIPSFGVTGATATYI
VVELALCVFYWIGALYTLHKTRI

Sequences:

>Translated_423_residues
MTSPKLIAIKHHLHHVTSPAMLILIRGFVAVAAGSLLGRILSAVAGILLVRYFEGPALYGQYATLVTTLTLISNLLGLGF
DTWLLREGGRDPSLLSFNARRLLVLKFGAASILIGALVVAWNQTDLSWLIIVGMLGIIAESYLNTGYVMFHALSRNGLVA
VLQSLDALLVVVLILLLMNWPPQVATLVVGQSIVSGTVLIIAAILLANHWRGAWRPLRLGQLIRSAGFFVLADVLANIYS
QAQIAILALFTSDVDVGIFRSAINLITMSFLVPMAMFNVSLPLLSRQNIERRQRYHIIFGIFGLATCYGIIALFGFWWFG
ADLLRLFYGNKYEAVVPLLTPLSLVPLFKSLSFVAVAIMLALSAQRLRVVMQSIVVILSLLLGLIIIPSFGVTGATATYI
VVELALCVFYWIGALYTLHKTRI
>Mature_422_residues
TSPKLIAIKHHLHHVTSPAMLILIRGFVAVAAGSLLGRILSAVAGILLVRYFEGPALYGQYATLVTTLTLISNLLGLGFD
TWLLREGGRDPSLLSFNARRLLVLKFGAASILIGALVVAWNQTDLSWLIIVGMLGIIAESYLNTGYVMFHALSRNGLVAV
LQSLDALLVVVLILLLMNWPPQVATLVVGQSIVSGTVLIIAAILLANHWRGAWRPLRLGQLIRSAGFFVLADVLANIYSQ
AQIAILALFTSDVDVGIFRSAINLITMSFLVPMAMFNVSLPLLSRQNIERRQRYHIIFGIFGLATCYGIIALFGFWWFGA
DLLRLFYGNKYEAVVPLLTPLSLVPLFKSLSFVAVAIMLALSAQRLRVVMQSIVVILSLLLGLIIIPSFGVTGATATYIV
VELALCVFYWIGALYTLHKTRI

Specific function: Unknown

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46243; Mature: 46112

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPKLIAIKHHLHHVTSPAMLILIRGFVAVAAGSLLGRILSAVAGILLVRYFEGPALYG
CCCCCEEHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
QYATLVTTLTLISNLLGLGFDTWLLREGGRDPSLLSFNARRLLVLKFGAASILIGALVVA
HHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEEECCCEEEEEECCHHHHHHHHHHHH
WNQTDLSWLIIVGMLGIIAESYLNTGYVMFHALSRNGLVAVLQSLDALLVVVLILLLMNW
CCCCCHHHHHHHHHHHHHHHHHHCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC
PPQVATLVVGQSIVSGTVLIIAAILLANHWRGAWRPLRLGQLIRSAGFFVLADVLANIYS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH
QAQIAILALFTSDVDVGIFRSAINLITMSFLVPMAMFNVSLPLLSRQNIERRQRYHIIFG
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHH
IFGLATCYGIIALFGFWWFGADLLRLFYGNKYEAVVPLLTPLSLVPLFKSLSFVAVAIML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALSAQRLRVVMQSIVVILSLLLGLIIIPSFGVTGATATYIVVELALCVFYWIGALYTLHK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TRI
CCC
>Mature Secondary Structure 
TSPKLIAIKHHLHHVTSPAMLILIRGFVAVAAGSLLGRILSAVAGILLVRYFEGPALYG
CCCCEEHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
QYATLVTTLTLISNLLGLGFDTWLLREGGRDPSLLSFNARRLLVLKFGAASILIGALVVA
HHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEEECCCEEEEEECCHHHHHHHHHHHH
WNQTDLSWLIIVGMLGIIAESYLNTGYVMFHALSRNGLVAVLQSLDALLVVVLILLLMNW
CCCCCHHHHHHHHHHHHHHHHHHCCCHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC
PPQVATLVVGQSIVSGTVLIIAAILLANHWRGAWRPLRLGQLIRSAGFFVLADVLANIYS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHH
QAQIAILALFTSDVDVGIFRSAINLITMSFLVPMAMFNVSLPLLSRQNIERRQRYHIIFG
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHH
IFGLATCYGIIALFGFWWFGADLLRLFYGNKYEAVVPLLTPLSLVPLFKSLSFVAVAIML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALSAQRLRVVMQSIVVILSLLLGLIIIPSFGVTGATATYIVVELALCVFYWIGALYTLHK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
TRI
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA