| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is wcaK [H]
Identifier: 222524766
GI number: 222524766
Start: 1888791
End: 1890050
Strand: Direct
Name: wcaK [H]
Synonym: Chy400_1493
Alternate gene names: 222524766
Gene position: 1888791-1890050 (Clockwise)
Preceding gene: 222524765
Following gene: 222524767
Centisome position: 35.85
GC content: 52.06
Gene sequence:
>1260_bases ATGAAGATCGTTTTGATCAATAATCACTCAGTGTTAAATGCTGGTGATTATGCAATTCTGCTCCAGACTCTCAATCTGCT TCACGCGGCTTTCCCGCAAGCTGATATTAGCATAACCTTCAACGAGCCAGCACTTGCCCGGGCACTGCTCCCAACCTATC GAATCTACGCTGCACCACCAGCCTGGGGGGTCGAACTCAACCAGCACCGGCAATCTGTTAAGGCATCACGATTTATTCGC GGATGGTATCTCATCCTCTTACTGATCGGCGCACTCCTGGTACGCTGGACAGGCAAACCAATCCGAGTCTTCCGTGATCC TCAAAAACAAGCCTTGCTCGCAGAACTGGCTTCAGCCGATCTGGTTGTGGCAAGTGGTGGCGGGTATCTCTACCACTGGT TCACCTTTGCCTCTGCACTGAGTCTCAGCGCACTTGTGATGCGGCGCAAGCTGGTCATGCTGCCACAATCCATTGGACCA TTCCATCATCCATTGCAAGTCTGGTTGGCGAGACAGATTGTAGCCAGAGCCGATCTGGTACTCACCCGTGAGTCAATCTC GCTCCGCCGCGCACAAGATTTGGGAGCAAAAGAAGCACGTTACGAACCAGATCTGGCTTTCGCCTTCCCCTCGGCTCCAG CCGAAGTGGCCGAGGCATGGTTGCGGTGGCGACTGTCGATACCCAACGCGGCAACAATGTACGTTGGTATTACTGCTATC AACTGGCAGGGCCAAAATTCACACTTTCGACAACAACAACACTACGAGGAGACATTAGTTGAGTTCATCAATCGTCTAAC TGACCAGGGTGCGGTAGTTGTCCTGTTTGCCCAGACCTGTGGCCCTGGCCAGGAGGAAGATGACCGACTGGTCAATATGC GGCTGTATCAAAGGGTGCGACATCAAGCACGAGTCGTGATGCTCAATGAACCCATTCACCCGGCACTGCTCCAGGCACTT TACGGGTGCATGAATTACTTCGTCGCAACCCGCCTTCACTCTTTTATTTTGGCAACAAATGCCGGCGTACCAGCCCTATC GATTGGTTATCTGACTAAGAGTATCGGCATTCTATCCGATATGGGTTTACCTGATCGCTGCCTTGACATTCAACATGTGA ACGTTGCAGATCTCTGGCAGGCATTTTGCCGCTTGCAGCGGGAAGGACTGCCTGATCACATCAAATCCTATATCGCTACG GCTCGTTCACGTCAGCAAGCGCTCCGGCATGAACTTGCCAGTCGATATGGAAAGGAATAA
Upstream 100 bases:
>100_bases TCGGTGTCACGGGTGCAACTGCAACGTATATCGTGGTTGAGCTAGCACTTTGTGTGTTCTATTGGATCGGCGCACTCTAC ACACTGCACAAGACACGCAT
Downstream 100 bases:
>100_bases AAGTCGGGCTATGGACGGTCGTATCAGTGTGGTTCAATTGATACCTGGCCTGATCGTAGGTGATCTGGGCGGAGGGTTGG AACTCTACAGTATCCGGCTG
Product: polysaccharide pyruvyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MKIVLINNHSVLNAGDYAILLQTLNLLHAAFPQADISITFNEPALARALLPTYRIYAAPPAWGVELNQHRQSVKASRFIR GWYLILLLIGALLVRWTGKPIRVFRDPQKQALLAELASADLVVASGGGYLYHWFTFASALSLSALVMRRKLVMLPQSIGP FHHPLQVWLARQIVARADLVLTRESISLRRAQDLGAKEARYEPDLAFAFPSAPAEVAEAWLRWRLSIPNAATMYVGITAI NWQGQNSHFRQQQHYEETLVEFINRLTDQGAVVVLFAQTCGPGQEEDDRLVNMRLYQRVRHQARVVMLNEPIHPALLQAL YGCMNYFVATRLHSFILATNAGVPALSIGYLTKSIGILSDMGLPDRCLDIQHVNVADLWQAFCRLQREGLPDHIKSYIAT ARSRQQALRHELASRYGKE
Sequences:
>Translated_419_residues MKIVLINNHSVLNAGDYAILLQTLNLLHAAFPQADISITFNEPALARALLPTYRIYAAPPAWGVELNQHRQSVKASRFIR GWYLILLLIGALLVRWTGKPIRVFRDPQKQALLAELASADLVVASGGGYLYHWFTFASALSLSALVMRRKLVMLPQSIGP FHHPLQVWLARQIVARADLVLTRESISLRRAQDLGAKEARYEPDLAFAFPSAPAEVAEAWLRWRLSIPNAATMYVGITAI NWQGQNSHFRQQQHYEETLVEFINRLTDQGAVVVLFAQTCGPGQEEDDRLVNMRLYQRVRHQARVVMLNEPIHPALLQAL YGCMNYFVATRLHSFILATNAGVPALSIGYLTKSIGILSDMGLPDRCLDIQHVNVADLWQAFCRLQREGLPDHIKSYIAT ARSRQQALRHELASRYGKE >Mature_419_residues MKIVLINNHSVLNAGDYAILLQTLNLLHAAFPQADISITFNEPALARALLPTYRIYAAPPAWGVELNQHRQSVKASRFIR GWYLILLLIGALLVRWTGKPIRVFRDPQKQALLAELASADLVVASGGGYLYHWFTFASALSLSALVMRRKLVMLPQSIGP FHHPLQVWLARQIVARADLVLTRESISLRRAQDLGAKEARYEPDLAFAFPSAPAEVAEAWLRWRLSIPNAATMYVGITAI NWQGQNSHFRQQQHYEETLVEFINRLTDQGAVVVLFAQTCGPGQEEDDRLVNMRLYQRVRHQARVVMLNEPIHPALLQAL YGCMNYFVATRLHSFILATNAGVPALSIGYLTKSIGILSDMGLPDRCLDIQHVNVADLWQAFCRLQREGLPDHIKSYIAT ARSRQQALRHELASRYGKE
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: COG2327
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polysaccharide pyruvyl transferase family [H]
Homologues:
Organism=Escherichia coli, GI1788358, Length=384, Percent_Identity=25.2604166666667, Blast_Score=110, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007345 [H]
Pfam domain/function: PF04230 PS_pyruv_trans [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 47214; Mature: 47214
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIVLINNHSVLNAGDYAILLQTLNLLHAAFPQADISITFNEPALARALLPTYRIYAAPP CEEEEECCCCEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHEEEECCC AWGVELNQHRQSVKASRFIRGWYLILLLIGALLVRWTGKPIRVFRDPQKQALLAELASAD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCC LVVASGGGYLYHWFTFASALSLSALVMRRKLVMLPQSIGPFHHPLQVWLARQIVARADLV EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHE LTRESISLRRAQDLGAKEARYEPDLAFAFPSAPAEVAEAWLRWRLSIPNAATMYVGITAI EEHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHEEECCCCCEEEEEEEEEE NWQGQNSHFRQQQHYEETLVEFINRLTDQGAVVVLFAQTCGPGQEEDDRLVNMRLYQRVR EECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH HQARVVMLNEPIHPALLQALYGCMNYFVATRLHSFILATNAGVPALSIGYLTKSIGILSD HHCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHC MGLPDRCLDIQHVNVADLWQAFCRLQREGLPDHIKSYIATARSRQQALRHELASRYGKE CCCCHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKIVLINNHSVLNAGDYAILLQTLNLLHAAFPQADISITFNEPALARALLPTYRIYAAPP CEEEEECCCCEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHEEEECCC AWGVELNQHRQSVKASRFIRGWYLILLLIGALLVRWTGKPIRVFRDPQKQALLAELASAD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCCC LVVASGGGYLYHWFTFASALSLSALVMRRKLVMLPQSIGPFHHPLQVWLARQIVARADLV EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHE LTRESISLRRAQDLGAKEARYEPDLAFAFPSAPAEVAEAWLRWRLSIPNAATMYVGITAI EEHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHHHHHHEEECCCCCEEEEEEEEEE NWQGQNSHFRQQQHYEETLVEFINRLTDQGAVVVLFAQTCGPGQEEDDRLVNMRLYQRVR EECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH HQARVVMLNEPIHPALLQALYGCMNYFVATRLHSFILATNAGVPALSIGYLTKSIGILSD HHCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHC MGLPDRCLDIQHVNVADLWQAFCRLQREGLPDHIKSYIATARSRQQALRHELASRYGKE CCCCHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8759852; 9278503 [H]