Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is mhpE [C]
Identifier: 222524746
GI number: 222524746
Start: 1869049
End: 1870080
Strand: Direct
Name: mhpE [C]
Synonym: Chy400_1473
Alternate gene names: 222524746
Gene position: 1869049-1870080 (Clockwise)
Preceding gene: 222524745
Following gene: 222524747
Centisome position: 35.47
GC content: 57.17
Gene sequence:
>1032_bases ATGAAACCACCACGGCTGACCGATACAACGCTCCGTGATGGCTCACATCCGATGCGTCATCAGTTTACCCGCCAGCAGGT AGCTACGATTGTCCAGGCTCTCGACCGGGCCGGCGTGCCGGTGATTGAGGTGAGTCACGGCGATGGCTTGGCCGGTTCGT CGCTGCAATATGGCTTCTCGCACACATCAGAATTTGATTTAATTGAAACGGCTCGTCAACATGCCGAAAGAGCGAAAATT GCTGCCCTGATGCTACCGGGCATCGGCACCCGGCAAGAATTGAAAGAGGCGGTGGCCCGTGGGGTGCAAGTAGTACGGAT TGCGACACAATGCACAGAGGCAGATATTTCTGAACAGCATTTTGGTCTGGCAAAAGAGCTGGGGTTAGAGACGGTTGGCT TTCTGATGATGGCCCATATGCGTCCCCCCGAAGAGCTGGCCAGGCAGGCGAAATTAATGGAGTCTTACGGCGCCGACTGC GTTTACATTGTCGACTCGGCGGGGGCGATGCTACCCCAGGATGCAGCAGCACGGGTGCAGGCGCTGAAAGACACCCTATC AGTGCAGGTTGGATTCCACGCACACAACAACTTAGGGCTTGGTATCGCCAACACCCTGGCAGCGCTCGAAGCCGGTGCCG ATCAGATCGATGGCTGTCTACGAGGTTTGGGGGCCGGTGCCGGCAACGCGGCAACCGAATTGCTGGCCGCAGTGCTTGAC CGGCTGGGACTCAATCCTGGTCTTGATGTCTTCAGTCTCATGGATGCGGCTGAGTATGTGGTTGCCCCTATCATGCCCTT CCAACCGTTCCCCGATCGGGATGCCATCACCATCGGCTATGCTGGTGTCTATTCAACATTTCTGCTACACGCCAAGCGCG CCGGTGCTCAATACAACGTCGATCCGCGTGAAATTCTGGTCGAGTTGGGCCGTCGTCAGGCGGTAGCGGGCCAGGAAGAT TGGATTATCGATGTTGCGCTCGAACTGAGTCGCCGGCATCAATCAAGTGCGCGAAAGGAGTCTCGCCCGTGA
Upstream 100 bases:
>100_bases TCCCAACCTATGCCGGGAATCTCGACATCATGACTGCCGCCGCACGACGGGTGGGTGAACTATTCGCCGCACACCTCTTG TCGAAACTGGAGGTGACCGT
Downstream 100 bases:
>100_bases GCAATGCAGTATCAGTACGAGCAGAGGTTCCGGCCATCGATCCACGCCTCTTTCGCTCCACGATGGGCTGTTTTGCAACC GGAGTGACGGTCGTCACGAC
Product: 4-hydroxy-2-ketovalerate aldolase
Products: NA
Alternate protein names: HOA; 4-hydroxy-2-keto-pentanoic acid aldolase; 4-hydroxy-2-oxopentanoate aldolase
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MKPPRLTDTTLRDGSHPMRHQFTRQQVATIVQALDRAGVPVIEVSHGDGLAGSSLQYGFSHTSEFDLIETARQHAERAKI AALMLPGIGTRQELKEAVARGVQVVRIATQCTEADISEQHFGLAKELGLETVGFLMMAHMRPPEELARQAKLMESYGADC VYIVDSAGAMLPQDAAARVQALKDTLSVQVGFHAHNNLGLGIANTLAALEAGADQIDGCLRGLGAGAGNAATELLAAVLD RLGLNPGLDVFSLMDAAEYVVAPIMPFQPFPDRDAITIGYAGVYSTFLLHAKRAGAQYNVDPREILVELGRRQAVAGQED WIIDVALELSRRHQSSARKESRP
Sequences:
>Translated_343_residues MKPPRLTDTTLRDGSHPMRHQFTRQQVATIVQALDRAGVPVIEVSHGDGLAGSSLQYGFSHTSEFDLIETARQHAERAKI AALMLPGIGTRQELKEAVARGVQVVRIATQCTEADISEQHFGLAKELGLETVGFLMMAHMRPPEELARQAKLMESYGADC VYIVDSAGAMLPQDAAARVQALKDTLSVQVGFHAHNNLGLGIANTLAALEAGADQIDGCLRGLGAGAGNAATELLAAVLD RLGLNPGLDVFSLMDAAEYVVAPIMPFQPFPDRDAITIGYAGVYSTFLLHAKRAGAQYNVDPREILVELGRRQAVAGQED WIIDVALELSRRHQSSARKESRP >Mature_343_residues MKPPRLTDTTLRDGSHPMRHQFTRQQVATIVQALDRAGVPVIEVSHGDGLAGSSLQYGFSHTSEFDLIETARQHAERAKI AALMLPGIGTRQELKEAVARGVQVVRIATQCTEADISEQHFGLAKELGLETVGFLMMAHMRPPEELARQAKLMESYGADC VYIVDSAGAMLPQDAAARVQALKDTLSVQVGFHAHNNLGLGIANTLAALEAGADQIDGCLRGLGAGAGNAATELLAAVLD RLGLNPGLDVFSLMDAAEYVVAPIMPFQPFPDRDAITIGYAGVYSTFLLHAKRAGAQYNVDPREILVELGRRQAVAGQED WIIDVALELSRRHQSSARKESRP
Specific function: Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta-cleavage pathway for the degradation of aromatic compounds
COG id: COG0119
COG function: function code E; Isopropylmalate/homocitrate/citramalate synthases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 4-hydroxy-2-oxovalerate aldolase family
Homologues:
Organism=Escherichia coli, GI1786548, Length=330, Percent_Identity=53.9393939393939, Blast_Score=333, Evalue=1e-92, Organism=Escherichia coli, GI1786261, Length=263, Percent_Identity=24.7148288973384, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HOA_CHLAA (A9W9U3)
Other databases:
- EMBL: CP000909 - RefSeq: YP_001634968.1 - ProteinModelPortal: A9W9U3 - SMR: A9W9U3 - GeneID: 5828456 - GenomeReviews: CP000909_GR - KEGG: cau:Caur_1351 - HOGENOM: HBG300122 - OMA: ELGSDAQ - ProtClustDB: PRK08195 - HAMAP: MF_01656 - InterPro: IPR017629 - InterPro: IPR013785 - InterPro: IPR012425 - InterPro: IPR000891 - Gene3D: G3DSA:3.20.20.70 - ProDom: PD005364 - TIGRFAMs: TIGR03217
Pfam domain/function: PF07836 DmpG_comm; PF00682 HMGL-like
EC number: =4.1.3.39
Molecular weight: Translated: 36951; Mature: 36951
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: PS50991 PYR_CT
Important sites: BINDING 166-166 BINDING 193-193 BINDING 284-284
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPPRLTDTTLRDGSHPMRHQFTRQQVATIVQALDRAGVPVIEVSHGDGLAGSSLQYGFS CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCC HTSEFDLIETARQHAERAKIAALMLPGIGTRQELKEAVARGVQVVRIATQCTEADISEQH CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHH FGLAKELGLETVGFLMMAHMRPPEELARQAKLMESYGADCVYIVDSAGAMLPQDAAARVQ CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHH ALKDTLSVQVGFHAHNNLGLGIANTLAALEAGADQIDGCLRGLGAGAGNAATELLAAVLD HHHHHHHEEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH RLGLNPGLDVFSLMDAAEYVVAPIMPFQPFPDRDAITIGYAGVYSTFLLHAKRAGAQYNV HHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCC DPREILVELGRRQAVAGQEDWIIDVALELSRRHQSSARKESRP CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKPPRLTDTTLRDGSHPMRHQFTRQQVATIVQALDRAGVPVIEVSHGDGLAGSSLQYGFS CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCC HTSEFDLIETARQHAERAKIAALMLPGIGTRQELKEAVARGVQVVRIATQCTEADISEQH CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHH FGLAKELGLETVGFLMMAHMRPPEELARQAKLMESYGADCVYIVDSAGAMLPQDAAARVQ CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHH ALKDTLSVQVGFHAHNNLGLGIANTLAALEAGADQIDGCLRGLGAGAGNAATELLAAVLD HHHHHHHEEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHH RLGLNPGLDVFSLMDAAEYVVAPIMPFQPFPDRDAITIGYAGVYSTFLLHAKRAGAQYNV HHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCC DPREILVELGRRQAVAGQEDWIIDVALELSRRHQSSARKESRP CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA