Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is lon
Identifier: 222524147
GI number: 222524147
Start: 1090254
End: 1092737
Strand: Reverse
Name: lon
Synonym: Chy400_0863
Alternate gene names: 222524147
Gene position: 1092737-1090254 (Counterclockwise)
Preceding gene: 222524148
Following gene: 222524144
Centisome position: 20.74
GC content: 60.35
Gene sequence:
>2484_bases ATGAATGATGAAACATTGCGGGAACAGACGACTGCGGAGTCTGAAGAGACATCACCAACGACACCTTCACCCGAACCAGA GGTGGTTGAGACGCTGCCCCTCATTCCGTTAGAGGGAGCGGTCGTTTTTCCTTATATTGTGGTCAGCCTGACGCTCGATG AGTTGGGGTCGGCGTCAGCCGAAGCCGCAGCGCGCGAGGGGCGTCAGGTGTTGCTGGCTGCCCGGCGGCCCGATGCGCCT GCCGATGCGCCGATTACCGACCAGCTCTTCAATGTAGGGGTAGTGGCCCGGATCGAGCAGCTCGGTACCTTGCCGAATGG TGCCAGCGGGGTGGTCGTGCGGGGGCTGGTGCGTGCTGTGCTGGGTGAAGCCGTCCAAACCACGCCGTATCTGCGTTTTC GCTTTACCCGCCGACCCGATGTCTTCGAGCGCACTCCGGAGCTTGAGCAGTTAATGGTCGAGGTTCACGCCGCGATTGAC GCGGTGCTCGAATTGCGCCCCGGCGTGACGCAAGAGATTCGCAATTTTGTCCGCTCCATCGACGATCCCGGTCATCTGGC CGACAACACCGGCTATTCGCCCGATTACACCTTCGCCGAGCGCCAGGAATTGCTCGAAACCTTCGACGTAAGCGAGCGGT TGCGCAAGGTGCTGATGTTTTACCGCAAACAGTTCGCCCTACTCGAAGTTCAGGCCAAACTGCGGCAAGAGGTGCAGGAG AGTGCGGCCCGGCAGCAACGCGAATTCTACCTGCGCCAGCAATTGCGCGCTATTCAGAAAGAGCTTGGCGAAGATACGAG TGAAGCCGCGGAACTTGACGATCTCCGGCAGAAGCTGGCCGCTGCCGATCTGCCTGAAGTTGCCCGTAAAGAGGCCGACC GTGAGCTGAGTCGTCTGGCCCGGATCAATGCCAGCTCACCGGAATATCAGATGGTACGTACCTACCTGGAGTGGCTGGCT GAGCTGCCGTGGAATAAGTATACCGGCCAGCCAATTGATATTGCCTTTGCCCGCCAGGTGCTTGATGAAGATCATCACGG CCTCCAGAAGGTCAAAGAGCGGATTCTGGAATATCTGGCAGTGAAGCAACGTCGGGCAGCGTTGGGTGAAGAGAACCTGC GTGCCAATCGCGAGCCAATTCTCGCCTTTGTTGGGCCACCCGGCGTGGGCAAGACCAGTCTGGGGCAGAGTATTGCCCGT GCGCTTGGCCGGAGCTTCGTCCGTATGAGCCTCGGTGGTGTACGTGATGAGGCCGAGCTGCGTGGTTTCCGCCGAACGTA CATTGGTTCGCAGCCGGGGCGGATCATCCAGGAGCTGCGCCGTGCCGGTACTGCCGACCCGGTGATCTTGCTGGATGAAA TCGATAAGCTGGGGATCGATTATCGCGGTGATCCGGCAGCCGCACTGCTTGAGGTGCTTGATCCCGAACAAAATCACACC TTCACCGATCACTATCTCAATCTGCCGTTCGATCTCTCACGTGTCCTCTTCCTGGCAACGGCCAACACGTGGGATACGGT ACCGCCGGCGTTACGTGACCGGATGGAGGTGATTGAGCTATCGGGGTATATCGAAGACGAGAAGGTGCAGATTGCCCAGA TTCATCTGGTGCCGCGCCAGTTGCGGGCCAACGGCTTGCGCCCGGAAGAGGCTGTCGTCACCGAAGACGCCATTCGCTGC ATCATTAATGAGTACACACGCGAAGCCGGTGTCCGGAATCTGGAGCGTTCGATTGGTGCGGTGCTGCGCAAGGTGGCCCG TCGCCTGAGCGAAGGCGAGATCGATCCGGCCAATACGCCGTTTGTGGTCGATGCTGCGTTTGTGCGCGCCGCGCTGGGGC GGCCACGCTTCACCAATGAAACCCGCGAACGGATCGATCAGCCCGGTGTGGCGATTGGCCTGGTATGGACACCGGTCGGC GGCGATATTATCTTTGTGGAGGCCAGTGCGGTTGAAGGGAAGAAAGAACTTACAATCACCGGCCAACTGGGTGAGGTCAT GCGCGAGAGTGCCGAAGCGGCGCTGACCTACGTCCGTTCGCGCGCCCGTTCGCTGGGCATCGAGCCGGATTTCTTCGAGA CCCACGCCATTCACATTCACGTGCCGGCTGGTGCGGTGCCCAAAGATGGCCCCTCAGCCGGTATTACGATGGCAACCGCC CTGGCGTCGGCGGCAACCGGTCGGCTGGTGCGTGACGATATTGCCATGACCGGCGAAATCTCACTGCGTGGGCGGGTGTT GCCGATTGGCGGCATCAAAGAGAAGGCACTCGGCGCTCACCGGGCCGGTATCCGCACTGTGATCCTGCCCAGGCGGAATC TGATCGATCTCGACGACCTGCCGCCGGCGGTTAGCGCCGAAATGACCTTCATTCCGGTAGACACCCTTGATGAGGTATTG AGCATCGCCCTTCTGCCGCCGGCGACGACCACAGATACGCTCACTGTGGCGCAGCGGAGTGATGTGCTCACCCCGGCATC CTGA
Upstream 100 bases:
>100_bases ACACTAGAACTTTTGTCCCATCATTGACACGCTCCACTATGAGTTTCAAAATATACATAGTGCGGAAGTCTTGTTCCGCG GATCAATGTGGAGACGTGCT
Downstream 100 bases:
>100_bases GTTTAGGGATGGACAGACTATTTGAATGCATCTTTCAGTGCATCAGGAAGCTATAAACAAAGCCTCTGAACGCCCCTCTC CCGCGCTGCGCGGGAGAGGG
Product: ATP-dependent protease La
Products: NA
Alternate protein names: ATP-dependent protease La
Number of amino acids: Translated: 827; Mature: 827
Protein sequence:
>827_residues MNDETLREQTTAESEETSPTTPSPEPEVVETLPLIPLEGAVVFPYIVVSLTLDELGSASAEAAAREGRQVLLAARRPDAP ADAPITDQLFNVGVVARIEQLGTLPNGASGVVVRGLVRAVLGEAVQTTPYLRFRFTRRPDVFERTPELEQLMVEVHAAID AVLELRPGVTQEIRNFVRSIDDPGHLADNTGYSPDYTFAERQELLETFDVSERLRKVLMFYRKQFALLEVQAKLRQEVQE SAARQQREFYLRQQLRAIQKELGEDTSEAAELDDLRQKLAAADLPEVARKEADRELSRLARINASSPEYQMVRTYLEWLA ELPWNKYTGQPIDIAFARQVLDEDHHGLQKVKERILEYLAVKQRRAALGEENLRANREPILAFVGPPGVGKTSLGQSIAR ALGRSFVRMSLGGVRDEAELRGFRRTYIGSQPGRIIQELRRAGTADPVILLDEIDKLGIDYRGDPAAALLEVLDPEQNHT FTDHYLNLPFDLSRVLFLATANTWDTVPPALRDRMEVIELSGYIEDEKVQIAQIHLVPRQLRANGLRPEEAVVTEDAIRC IINEYTREAGVRNLERSIGAVLRKVARRLSEGEIDPANTPFVVDAAFVRAALGRPRFTNETRERIDQPGVAIGLVWTPVG GDIIFVEASAVEGKKELTITGQLGEVMRESAEAALTYVRSRARSLGIEPDFFETHAIHIHVPAGAVPKDGPSAGITMATA LASAATGRLVRDDIAMTGEISLRGRVLPIGGIKEKALGAHRAGIRTVILPRRNLIDLDDLPPAVSAEMTFIPVDTLDEVL SIALLPPATTTDTLTVAQRSDVLTPAS
Sequences:
>Translated_827_residues MNDETLREQTTAESEETSPTTPSPEPEVVETLPLIPLEGAVVFPYIVVSLTLDELGSASAEAAAREGRQVLLAARRPDAP ADAPITDQLFNVGVVARIEQLGTLPNGASGVVVRGLVRAVLGEAVQTTPYLRFRFTRRPDVFERTPELEQLMVEVHAAID AVLELRPGVTQEIRNFVRSIDDPGHLADNTGYSPDYTFAERQELLETFDVSERLRKVLMFYRKQFALLEVQAKLRQEVQE SAARQQREFYLRQQLRAIQKELGEDTSEAAELDDLRQKLAAADLPEVARKEADRELSRLARINASSPEYQMVRTYLEWLA ELPWNKYTGQPIDIAFARQVLDEDHHGLQKVKERILEYLAVKQRRAALGEENLRANREPILAFVGPPGVGKTSLGQSIAR ALGRSFVRMSLGGVRDEAELRGFRRTYIGSQPGRIIQELRRAGTADPVILLDEIDKLGIDYRGDPAAALLEVLDPEQNHT FTDHYLNLPFDLSRVLFLATANTWDTVPPALRDRMEVIELSGYIEDEKVQIAQIHLVPRQLRANGLRPEEAVVTEDAIRC IINEYTREAGVRNLERSIGAVLRKVARRLSEGEIDPANTPFVVDAAFVRAALGRPRFTNETRERIDQPGVAIGLVWTPVG GDIIFVEASAVEGKKELTITGQLGEVMRESAEAALTYVRSRARSLGIEPDFFETHAIHIHVPAGAVPKDGPSAGITMATA LASAATGRLVRDDIAMTGEISLRGRVLPIGGIKEKALGAHRAGIRTVILPRRNLIDLDDLPPAVSAEMTFIPVDTLDEVL SIALLPPATTTDTLTVAQRSDVLTPAS >Mature_827_residues MNDETLREQTTAESEETSPTTPSPEPEVVETLPLIPLEGAVVFPYIVVSLTLDELGSASAEAAAREGRQVLLAARRPDAP ADAPITDQLFNVGVVARIEQLGTLPNGASGVVVRGLVRAVLGEAVQTTPYLRFRFTRRPDVFERTPELEQLMVEVHAAID AVLELRPGVTQEIRNFVRSIDDPGHLADNTGYSPDYTFAERQELLETFDVSERLRKVLMFYRKQFALLEVQAKLRQEVQE SAARQQREFYLRQQLRAIQKELGEDTSEAAELDDLRQKLAAADLPEVARKEADRELSRLARINASSPEYQMVRTYLEWLA ELPWNKYTGQPIDIAFARQVLDEDHHGLQKVKERILEYLAVKQRRAALGEENLRANREPILAFVGPPGVGKTSLGQSIAR ALGRSFVRMSLGGVRDEAELRGFRRTYIGSQPGRIIQELRRAGTADPVILLDEIDKLGIDYRGDPAAALLEVLDPEQNHT FTDHYLNLPFDLSRVLFLATANTWDTVPPALRDRMEVIELSGYIEDEKVQIAQIHLVPRQLRANGLRPEEAVVTEDAIRC IINEYTREAGVRNLERSIGAVLRKVARRLSEGEIDPANTPFVVDAAFVRAALGRPRFTNETRERIDQPGVAIGLVWTPVG GDIIFVEASAVEGKKELTITGQLGEVMRESAEAALTYVRSRARSLGIEPDFFETHAIHIHVPAGAVPKDGPSAGITMATA LASAATGRLVRDDIAMTGEISLRGRVLPIGGIKEKALGAHRAGIRTVILPRRNLIDLDDLPPAVSAEMTFIPVDTLDEVL SIALLPPATTTDTLTVAQRSDVLTPAS
Specific function: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced
COG id: COG0466
COG function: function code O; ATP-dependent Lon protease, bacterial type
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Lon domain
Homologues:
Organism=Homo sapiens, GI31377667, Length=784, Percent_Identity=41.3265306122449, Blast_Score=577, Evalue=1e-164, Organism=Homo sapiens, GI21396489, Length=678, Percent_Identity=42.7728613569322, Blast_Score=548, Evalue=1e-155, Organism=Escherichia coli, GI1786643, Length=776, Percent_Identity=46.1340206185567, Blast_Score=669, Evalue=0.0, Organism=Caenorhabditis elegans, GI17505831, Length=664, Percent_Identity=39.1566265060241, Blast_Score=476, Evalue=1e-134, Organism=Caenorhabditis elegans, GI17556486, Length=544, Percent_Identity=43.1985294117647, Blast_Score=444, Evalue=1e-124, Organism=Saccharomyces cerevisiae, GI6319449, Length=721, Percent_Identity=37.7253814147018, Blast_Score=502, Evalue=1e-143, Organism=Drosophila melanogaster, GI221513036, Length=689, Percent_Identity=41.6545718432511, Blast_Score=529, Evalue=1e-150, Organism=Drosophila melanogaster, GI24666867, Length=689, Percent_Identity=41.6545718432511, Blast_Score=529, Evalue=1e-150,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): LON_CHLAA (A9WGB5)
Other databases:
- EMBL: CP000909 - RefSeq: YP_001634425.1 - ProteinModelPortal: A9WGB5 - GeneID: 5824830 - GenomeReviews: CP000909_GR - KEGG: cau:Caur_0798 - HOGENOM: HBG566281 - OMA: HYTLLVT - ProtClustDB: CLSK973577 - GO: GO:0005737 - GO: GO:0006508 - InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR008269 - InterPro: IPR004815 - InterPro: IPR003111 - InterPro: IPR008268 - InterPro: IPR001984 - InterPro: IPR015947 - InterPro: IPR020568 - PRINTS: PR00830 - SMART: SM00382 - TIGRFAMs: TIGR00763
Pfam domain/function: PF00004 AAA; PF02190 LON; PF05362 Lon_C; SSF88697 PUA-like; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: =3.4.21.53
Molecular weight: Translated: 91353; Mature: 91353
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: PS01046 LON_SER
Important sites: ACT_SITE 712-712 ACT_SITE 755-755
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDETLREQTTAESEETSPTTPSPEPEVVETLPLIPLEGAVVFPYIVVSLTLDELGSASA CCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHH EAAAREGRQVLLAARRPDAPADAPITDQLFNVGVVARIEQLGTLPNGASGVVVRGLVRAV HHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH LGEAVQTTPYLRFRFTRRPDVFERTPELEQLMVEVHAAIDAVLELRPGVTQEIRNFVRSI HHHHHHCCCCEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC DDPGHLADNTGYSPDYTFAERQELLETFDVSERLRKVLMFYRKQFALLEVQAKLRQEVQE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAARQQREFYLRQQLRAIQKELGEDTSEAAELDDLRQKLAAADLPEVARKEADRELSRLA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH RINASSPEYQMVRTYLEWLAELPWNKYTGQPIDIAFARQVLDEDHHGLQKVKERILEYLA HCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH VKQRRAALGEENLRANREPILAFVGPPGVGKTSLGQSIARALGRSFVRMSLGGVRDEAEL HHHHHHHCCHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH RGFRRTYIGSQPGRIIQELRRAGTADPVILLDEIDKLGIDYRGDPAAALLEVLDPEQNHT HHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEECHHHCCCCCCCCHHHHHHHHHCCCCCCC FTDHYLNLPFDLSRVLFLATANTWDTVPPALRDRMEVIELSGYIEDEKVQIAQIHLVPRQ CCHHEECCCHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECHHH LRANGLRPEEAVVTEDAIRCIINEYTREAGVRNLERSIGAVLRKVARRLSEGEIDPANTP HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC FVVDAAFVRAALGRPRFTNETRERIDQPGVAIGLVWTPVGGDIIFVEASAVEGKKELTIT EEEHHHHHHHHHCCCCCCCHHHHHHCCCCEEEEEEEECCCCCEEEEEECCCCCCCEEEEE GQLGEVMRESAEAALTYVRSRARSLGIEPDFFETHAIHIHVPAGAVPKDGPSAGITMATA CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHH LASAATGRLVRDDIAMTGEISLRGRVLPIGGIKEKALGAHRAGIRTVILPRRNLIDLDDL HHHHHHCCHHHHHHCEECEEEECCEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCCCCC PPAVSAEMTFIPVDTLDEVLSIALLPPATTTDTLTVAQRSDVLTPAS CCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCC >Mature Secondary Structure MNDETLREQTTAESEETSPTTPSPEPEVVETLPLIPLEGAVVFPYIVVSLTLDELGSASA CCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHH EAAAREGRQVLLAARRPDAPADAPITDQLFNVGVVARIEQLGTLPNGASGVVVRGLVRAV HHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH LGEAVQTTPYLRFRFTRRPDVFERTPELEQLMVEVHAAIDAVLELRPGVTQEIRNFVRSI HHHHHHCCCCEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC DDPGHLADNTGYSPDYTFAERQELLETFDVSERLRKVLMFYRKQFALLEVQAKLRQEVQE CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAARQQREFYLRQQLRAIQKELGEDTSEAAELDDLRQKLAAADLPEVARKEADRELSRLA HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH RINASSPEYQMVRTYLEWLAELPWNKYTGQPIDIAFARQVLDEDHHGLQKVKERILEYLA HCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH VKQRRAALGEENLRANREPILAFVGPPGVGKTSLGQSIARALGRSFVRMSLGGVRDEAEL HHHHHHHCCHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH RGFRRTYIGSQPGRIIQELRRAGTADPVILLDEIDKLGIDYRGDPAAALLEVLDPEQNHT HHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEECHHHCCCCCCCCHHHHHHHHHCCCCCCC FTDHYLNLPFDLSRVLFLATANTWDTVPPALRDRMEVIELSGYIEDEKVQIAQIHLVPRQ CCHHEECCCHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECHHH LRANGLRPEEAVVTEDAIRCIINEYTREAGVRNLERSIGAVLRKVARRLSEGEIDPANTP HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC FVVDAAFVRAALGRPRFTNETRERIDQPGVAIGLVWTPVGGDIIFVEASAVEGKKELTIT EEEHHHHHHHHHCCCCCCCHHHHHHCCCCEEEEEEEECCCCCEEEEEECCCCCCCEEEEE GQLGEVMRESAEAALTYVRSRARSLGIEPDFFETHAIHIHVPAGAVPKDGPSAGITMATA CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHH LASAATGRLVRDDIAMTGEISLRGRVLPIGGIKEKALGAHRAGIRTVILPRRNLIDLDDL HHHHHHCCHHHHHHCEECEEEECCEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCCCCC PPAVSAEMTFIPVDTLDEVLSIALLPPATTTDTLTVAQRSDVLTPAS CCCCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA