Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
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Accession | NC_012032 |
Length | 5,268,950 |
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The map label for this gene is 222523929
Identifier: 222523929
GI number: 222523929
Start: 787655
End: 788698
Strand: Direct
Name: 222523929
Synonym: Chy400_0640
Alternate gene names: NA
Gene position: 787655-788698 (Clockwise)
Preceding gene: 222523921
Following gene: 222523930
Centisome position: 14.95
GC content: 57.76
Gene sequence:
>1044_bases ATGGCTGAATGGATGATCTACGGCGCCAACGGCTATACCGGACGACTGATCGCGCGTGCAGCAGTGCAGGCAGGTTTGCG ACCACGGCTCGCCGGGCGCAATGCAACACAGATAACGGCGCTGGCAAATGAACTGCATCTACCCTTTACCATCTGCCGAT TGGATGATGAAGCAGCCCTGCGTCGTGCGCTTGAAGGCATGCAGCTCGTTCTCCACTGCGCCGGCCCATTCCAGGAGACC AGTGCGCCAATGGTGCAGGCATGTCTGAACAGTGGTGTCCACTATCTTGACATCACGGGTGAGATAAGTGTTTTTGAAGC ACTGGCACGTCAGGATCAGACTGCCCGCCAGGCCGGAGTCATGCTTATGCCAGGGGTCGGCTTTGATGTCGTACCCTCCG ATTGTCTGGCGGCGCATCTGGCACGTCGCCTACCGGGTGCGAACAATCTGGTGCTGGCATTTCAGGCGCTCGGCAGCATC TCACGCGGCACAGCCATCACAATGCTGACCATGGCCCATCGCGGATGCGAACGGCGAGACGGGCGGCTTGTCAGCACACC ACCACTCCATGAGGTGCGAACCTTTGATTTCGGGCGTGGACCACAACCGTGTGTGAGTATTCCGTGGGGCGATGTTGCTA CGGCCTACTACACGACTGGTATTCCCAACATCAAGGTTTTTGTCGCCATTTCGCGCCGAAACCTGCCGTGGCTCGGCCTG GTACGCGCCATACTTCCCCTGATCCACCTCAAACCAATCCGCACCAGTCTCCAGAACTGGCTACGCCATACGCTTGATGG CCCGGATACCACAACACGGGCAAAAGGAAAGAGTATCATCGTCGGTGAAGTCACCGACAGAACCGGACAGCGAGTTACCG GTCGGCTTATCGGGCCTGAAGGATATTCGCTTACGGTGGCAACAGCGTTGCTCATTGTGCGCCGTGTTCTGGCAGGTACT TACGAGGCAGGTTTTCATACACCGGCAGGGTTGTATGGGCCAGATCTGATCTGTGAGGTGCCCGGAGTGCAGATAACAGG TTGA
Upstream 100 bases:
>100_bases TGTAGCAGACTGACGTACAACACGTGCCGGCAACGCTGCACCCGCCGGGATGGGTGATAATAGGAAGGTGGTACCGCAAC GTCAATACGGAGCAACAACC
Downstream 100 bases:
>100_bases TTGAAGGCATTATCTTGATCGGACTCGTGCTCCGCCTGAAGAGCACATTGCGCAGCCAGAAAGACGGAGCACCGGCTATG ATGGGCGGAAACAGTAGCCA
Product: Saccharopine dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 346
Protein sequence:
>347_residues MAEWMIYGANGYTGRLIARAAVQAGLRPRLAGRNATQITALANELHLPFTICRLDDEAALRRALEGMQLVLHCAGPFQET SAPMVQACLNSGVHYLDITGEISVFEALARQDQTARQAGVMLMPGVGFDVVPSDCLAAHLARRLPGANNLVLAFQALGSI SRGTAITMLTMAHRGCERRDGRLVSTPPLHEVRTFDFGRGPQPCVSIPWGDVATAYYTTGIPNIKVFVAISRRNLPWLGL VRAILPLIHLKPIRTSLQNWLRHTLDGPDTTTRAKGKSIIVGEVTDRTGQRVTGRLIGPEGYSLTVATALLIVRRVLAGT YEAGFHTPAGLYGPDLICEVPGVQITG
Sequences:
>Translated_347_residues MAEWMIYGANGYTGRLIARAAVQAGLRPRLAGRNATQITALANELHLPFTICRLDDEAALRRALEGMQLVLHCAGPFQET SAPMVQACLNSGVHYLDITGEISVFEALARQDQTARQAGVMLMPGVGFDVVPSDCLAAHLARRLPGANNLVLAFQALGSI SRGTAITMLTMAHRGCERRDGRLVSTPPLHEVRTFDFGRGPQPCVSIPWGDVATAYYTTGIPNIKVFVAISRRNLPWLGL VRAILPLIHLKPIRTSLQNWLRHTLDGPDTTTRAKGKSIIVGEVTDRTGQRVTGRLIGPEGYSLTVATALLIVRRVLAGT YEAGFHTPAGLYGPDLICEVPGVQITG >Mature_346_residues AEWMIYGANGYTGRLIARAAVQAGLRPRLAGRNATQITALANELHLPFTICRLDDEAALRRALEGMQLVLHCAGPFQETS APMVQACLNSGVHYLDITGEISVFEALARQDQTARQAGVMLMPGVGFDVVPSDCLAAHLARRLPGANNLVLAFQALGSIS RGTAITMLTMAHRGCERRDGRLVSTPPLHEVRTFDFGRGPQPCVSIPWGDVATAYYTTGIPNIKVFVAISRRNLPWLGLV RAILPLIHLKPIRTSLQNWLRHTLDGPDTTTRAKGKSIIVGEVTDRTGQRVTGRLIGPEGYSLTVATALLIVRRVLAGTY EAGFHTPAGLYGPDLICEVPGVQITG
Specific function: Involved in the reduction of the double bond between C-4 and C-5 during phthiocerol dimycocerosates (DIM A) and glycosylated phenolphthiocerol dimycocerosates (PGL) biosynthesis [H]
COG id: COG3268
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the saccharopine dehydrogenase family. Enoyl reductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI55770836, Length=182, Percent_Identity=23.0769230769231, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24644140, Length=166, Percent_Identity=31.3253012048193, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI24644142, Length=166, Percent_Identity=31.3253012048193, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI21356081, Length=166, Percent_Identity=31.3253012048193, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI24646278, Length=162, Percent_Identity=27.7777777777778, Blast_Score=81, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR005097 [H]
Pfam domain/function: PF03435 Saccharop_dh [H]
EC number: NA
Molecular weight: Translated: 37459; Mature: 37328
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEWMIYGANGYTGRLIARAAVQAGLRPRLAGRNATQITALANELHLPFTICRLDDEAAL CCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCHHHHH RRALEGMQLVLHCAGPFQETSAPMVQACLNSGVHYLDITGEISVFEALARQDQTARQAGV HHHHHHHHEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCE MLMPGVGFDVVPSDCLAAHLARRLPGANNLVLAFQALGSISRGTAITMLTMAHRGCERRD EEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEHHHHHCCCCCCHHHHHHHHHHCCCHHCC GRLVSTPPLHEVRTFDFGRGPQPCVSIPWGDVATAYYTTGIPNIKVFVAISRRNLPWLGL CEEECCCCCHHHEECCCCCCCCCEEECCCCCHHHHEEECCCCCEEEEEEEECCCCCHHHH VRAILPLIHLKPIRTSLQNWLRHTLDGPDTTTRAKGKSIIVGEVTDRTGQRVTGRLIGPE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCC GYSLTVATALLIVRRVLAGTYEAGFHTPAGLYGPDLICEVPGVQITG CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCEEECC >Mature Secondary Structure AEWMIYGANGYTGRLIARAAVQAGLRPRLAGRNATQITALANELHLPFTICRLDDEAAL CCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCHHHHH RRALEGMQLVLHCAGPFQETSAPMVQACLNSGVHYLDITGEISVFEALARQDQTARQAGV HHHHHHHHEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCE MLMPGVGFDVVPSDCLAAHLARRLPGANNLVLAFQALGSISRGTAITMLTMAHRGCERRD EEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEHHHHHCCCCCCHHHHHHHHHHCCCHHCC GRLVSTPPLHEVRTFDFGRGPQPCVSIPWGDVATAYYTTGIPNIKVFVAISRRNLPWLGL CEEECCCCCHHHEECCCCCCCCCEEECCCCCHHHHEEECCCCCEEEEEEEECCCCCHHHH VRAILPLIHLKPIRTSLQNWLRHTLDGPDTTTRAKGKSIIVGEVTDRTGQRVTGRLIGPE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCC GYSLTVATALLIVRRVLAGTYEAGFHTPAGLYGPDLICEVPGVQITG CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA