Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222523930

Identifier: 222523930

GI number: 222523930

Start: 789009

End: 789785

Strand: Direct

Name: 222523930

Synonym: Chy400_0641

Alternate gene names: NA

Gene position: 789009-789785 (Clockwise)

Preceding gene: 222523929

Following gene: 222523931

Centisome position: 14.97

GC content: 58.04

Gene sequence:

>777_bases
ATGCATCGCGGGGTTGCACTTCTCCTGGAACCGGATCACACACGCCGGATGAACCTGATACATACTTTGCATCAATGGTA
CTGGGCCGTGCTCAATGTAACCAATCTCGACATGGCCACCCACATTGTCCAGCATTGTGTGGTGCCATTGTGCATTCTAC
ATCTCTCCGATCTGGAACATACTTCCGCAGCGCTATCGCGCTTCCTCGCCACGGTATCGGCAGACCAAACCGTCATTATG
CTGGTCGATGACTCGCCGGCACCGCTGCGCCCACCGCAATCATCGGCCCACGTGATGTGGATGCCCACTACACCGATGGA
CATTACCCCAGATACCACTATGCTCGCAGTCGTGCGCGAGCTGGCCTATCGCCTTGATCTGGTGCCAGCACCGCAGCAGC
AGCCAGTCTTTCGCCTCGACCCCATCCAGAAGCGCGTGCAGATCGATGATCGGGTGATTACGCTCAGCGAGAGCGAACTG
ATCATCCTTGACTACCTGTACCAGGCGAATGGCCGTATCTGCACCTTTCTCGAGATCGCCCGGTTGCTGTATCCACGACT
GCATGTCTACGACACCGATGAACTGCGCCGGCTGATTGGCAGCCGGATACAGCGCTTGCGACGCAAGCTCGAAGCTGATC
CTGCCGCCCCACGGTATCTGCACCTGGTTCGTGGGGTCGGCTTTCGGCTCGTGATCGCGCCGCTGGAGCCAGCCGGATCA
CACGAGGTTGAGATACCGGTCTCTGAAGAAGCGATACGTGACGGAGCACTACCATAG

Upstream 100 bases:

>100_bases
TATATATCAATATCTTTAGTTGCATAAACCTATCATCTCTTTTATAATCTGCCTAACAAATCGATGCTGTAACAACGTAA
GGTATTAAGGTATATCCATC

Downstream 100 bases:

>100_bases
TTCCTATCGCCACATGGCTTTTGCCAGCAACGCATGTCCAGTTCAGGCACGCGCCACGGGATATTCCTGGAGGAGCTACG
ACGTAACACGACACGGCGCC

Product: putative winged helix family two component transcriptional regulator

Products: NA

Alternate protein names: Response Regulator Receiver Protein

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MHRGVALLLEPDHTRRMNLIHTLHQWYWAVLNVTNLDMATHIVQHCVVPLCILHLSDLEHTSAALSRFLATVSADQTVIM
LVDDSPAPLRPPQSSAHVMWMPTTPMDITPDTTMLAVVRELAYRLDLVPAPQQQPVFRLDPIQKRVQIDDRVITLSESEL
IILDYLYQANGRICTFLEIARLLYPRLHVYDTDELRRLIGSRIQRLRRKLEADPAAPRYLHLVRGVGFRLVIAPLEPAGS
HEVEIPVSEEAIRDGALP

Sequences:

>Translated_258_residues
MHRGVALLLEPDHTRRMNLIHTLHQWYWAVLNVTNLDMATHIVQHCVVPLCILHLSDLEHTSAALSRFLATVSADQTVIM
LVDDSPAPLRPPQSSAHVMWMPTTPMDITPDTTMLAVVRELAYRLDLVPAPQQQPVFRLDPIQKRVQIDDRVITLSESEL
IILDYLYQANGRICTFLEIARLLYPRLHVYDTDELRRLIGSRIQRLRRKLEADPAAPRYLHLVRGVGFRLVIAPLEPAGS
HEVEIPVSEEAIRDGALP
>Mature_258_residues
MHRGVALLLEPDHTRRMNLIHTLHQWYWAVLNVTNLDMATHIVQHCVVPLCILHLSDLEHTSAALSRFLATVSADQTVIM
LVDDSPAPLRPPQSSAHVMWMPTTPMDITPDTTMLAVVRELAYRLDLVPAPQQQPVFRLDPIQKRVQIDDRVITLSESEL
IILDYLYQANGRICTFLEIARLLYPRLHVYDTDELRRLIGSRIQRLRRKLEADPAAPRYLHLVRGVGFRLVIAPLEPAGS
HEVEIPVSEEAIRDGALP

Specific function: Unknown

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29350; Mature: 29350

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRGVALLLEPDHTRRMNLIHTLHQWYWAVLNVTNLDMATHIVQHCVVPLCILHLSDLEH
CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHH
TSAALSRFLATVSADQTVIMLVDDSPAPLRPPQSSAHVMWMPTTPMDITPDTTMLAVVRE
HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHH
LAYRLDLVPAPQQQPVFRLDPIQKRVQIDDRVITLSESELIILDYLYQANGRICTFLEIA
HHHHHCCCCCCCCCCCEEECCHHHHHCCCCEEEEECCCCEEEEEEEHHCCCCEEHHHHHH
RLLYPRLHVYDTDELRRLIGSRIQRLRRKLEADPAAPRYLHLVRGVGFRLVIAPLEPAGS
HHHCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEEECCCCCC
HEVEIPVSEEAIRDGALP
CEEECCCCHHHHHCCCCC
>Mature Secondary Structure
MHRGVALLLEPDHTRRMNLIHTLHQWYWAVLNVTNLDMATHIVQHCVVPLCILHLSDLEH
CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHH
TSAALSRFLATVSADQTVIMLVDDSPAPLRPPQSSAHVMWMPTTPMDITPDTTMLAVVRE
HHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHH
LAYRLDLVPAPQQQPVFRLDPIQKRVQIDDRVITLSESELIILDYLYQANGRICTFLEIA
HHHHHCCCCCCCCCCCEEECCHHHHHCCCCEEEEECCCCEEEEEEEHHCCCCEEHHHHHH
RLLYPRLHVYDTDELRRLIGSRIQRLRRKLEADPAAPRYLHLVRGVGFRLVIAPLEPAGS
HHHCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEEECCCCCC
HEVEIPVSEEAIRDGALP
CEEECCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA