Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

Click here to switch to the map view.

The map label for this gene is 222523922

Identifier: 222523922

GI number: 222523922

Start: 781972

End: 782874

Strand: Reverse

Name: 222523922

Synonym: Chy400_0633

Alternate gene names: NA

Gene position: 782874-781972 (Counterclockwise)

Preceding gene: 222523923

Following gene: 222523919

Centisome position: 14.86

GC content: 56.7

Gene sequence:

>903_bases
ATGACGCGCCAGCATCTTTCTGTGTTCTTGACTGCCACGTTGTTGATGCTCGTTGTGGCGGGGTGTGGTCAACCTGCGGC
AGCACCAACCCCTGCGGCATTGCCAATTGCACCGGTGATCGCAGCATCCGAGCTGGTCGTTGGTGTTAATCGCCTTCCGT
TTGGTTTACTGCAGGGTGGTGTACCGCTGAACGATCCTGACCTGACCCTCGATGTGACCCTATATTACGTTGGCCCCGGT
GGTGATCGCACAAAGCCGGTAGCGACAACCCAGGCAGTGTATCGTGGTCAGGGACTCCCGGTCGGTCTCTACGTTGCCTA
CGCCACCTTCGACCGGGCGGGTGGTTGGGAAGCCGAAATCACCATTCCGCAAACCGATGGGCCACAGTCTTCGCGTATTC
GTCTTGACGTCAGTGAACGTGCGTTCGCCCCGATGGTAGGCGACCGAGCGATCCCCGTGCAGAATCTGACGGCTGCTGAT
GTGCCTGCACTTGATCAGCTTACTTCTGATCCGCGTCCTGACCCGGACTTCTACCAGATGACGATTGCCGAGGCGATGAA
GGCTGGCAAGCCGTTCGTCGTCTCTTTTGCGACACCGGGTTACTGCCAGACAGCGGTATGTGCACCAAATATGGCAGTCC
TGAAGCAACTCAAGAGCGAATTCGGTGATCGGGTCAATTTCATTCATGTGGAAGTCTATCCGTACCCATTTGGCGAGTCA
TTTCAGCAGGCCAGAATGGTCGATGCAATGAAAGAATGGAACCTGCGCACCGAGCCATGGACATTCCTGGTTGATCGCGA
TGGCATTATCCAGGCCCGGTATGAGGGCGGTATCACGTTTGCCGAACTACGACCGGCGATTGCCCAACTTGCAGAGGGGC
AACCGGTCAATCCTGCACCGTAA

Upstream 100 bases:

>100_bases
ATGGAAGGGTTATGGGAAATTACCGTCGTGGTTGAATGGGCGGCGAACACCTATCGGGCCACCTTTCAGCGCGACGTTCT
GCAATAAGATGGAGTTCATC

Downstream 100 bases:

>100_bases
ATAGCGAGCCGAATCCCGCATCGGGCATGATCGAACGTTCGCGCGCTGCGTCCAGAGGAGTCAAAACGGGCGATACACAC
GTGTCTAATGAATCAAAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MTRQHLSVFLTATLLMLVVAGCGQPAAAPTPAALPIAPVIAASELVVGVNRLPFGLLQGGVPLNDPDLTLDVTLYYVGPG
GDRTKPVATTQAVYRGQGLPVGLYVAYATFDRAGGWEAEITIPQTDGPQSSRIRLDVSERAFAPMVGDRAIPVQNLTAAD
VPALDQLTSDPRPDPDFYQMTIAEAMKAGKPFVVSFATPGYCQTAVCAPNMAVLKQLKSEFGDRVNFIHVEVYPYPFGES
FQQARMVDAMKEWNLRTEPWTFLVDRDGIIQARYEGGITFAELRPAIAQLAEGQPVNPAP

Sequences:

>Translated_300_residues
MTRQHLSVFLTATLLMLVVAGCGQPAAAPTPAALPIAPVIAASELVVGVNRLPFGLLQGGVPLNDPDLTLDVTLYYVGPG
GDRTKPVATTQAVYRGQGLPVGLYVAYATFDRAGGWEAEITIPQTDGPQSSRIRLDVSERAFAPMVGDRAIPVQNLTAAD
VPALDQLTSDPRPDPDFYQMTIAEAMKAGKPFVVSFATPGYCQTAVCAPNMAVLKQLKSEFGDRVNFIHVEVYPYPFGES
FQQARMVDAMKEWNLRTEPWTFLVDRDGIIQARYEGGITFAELRPAIAQLAEGQPVNPAP
>Mature_299_residues
TRQHLSVFLTATLLMLVVAGCGQPAAAPTPAALPIAPVIAASELVVGVNRLPFGLLQGGVPLNDPDLTLDVTLYYVGPGG
DRTKPVATTQAVYRGQGLPVGLYVAYATFDRAGGWEAEITIPQTDGPQSSRIRLDVSERAFAPMVGDRAIPVQNLTAADV
PALDQLTSDPRPDPDFYQMTIAEAMKAGKPFVVSFATPGYCQTAVCAPNMAVLKQLKSEFGDRVNFIHVEVYPYPFGESF
QQARMVDAMKEWNLRTEPWTFLVDRDGIIQARYEGGITFAELRPAIAQLAEGQPVNPAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32332; Mature: 32201

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRQHLSVFLTATLLMLVVAGCGQPAAAPTPAALPIAPVIAASELVVGVNRLPFGLLQGG
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCC
VPLNDPDLTLDVTLYYVGPGGDRTKPVATTQAVYRGQGLPVGLYVAYATFDRAGGWEAEI
CCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHCCCCCCEEEEEEEEEHCCCCCCEEEE
TIPQTDGPQSSRIRLDVSERAFAPMVGDRAIPVQNLTAADVPALDQLTSDPRPDPDFYQM
EECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHH
TIAEAMKAGKPFVVSFATPGYCQTAVCAPNMAVLKQLKSEFGDRVNFIHVEVYPYPFGES
HHHHHHHCCCCEEEEECCCCCCCCEECCCCHHHHHHHHHHHCCCEEEEEEEEEECCCCCH
FQQARMVDAMKEWNLRTEPWTFLVDRDGIIQARYEGGITFAELRPAIAQLAEGQPVNPAP
HHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEECCCEEHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TRQHLSVFLTATLLMLVVAGCGQPAAAPTPAALPIAPVIAASELVVGVNRLPFGLLQGG
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCC
VPLNDPDLTLDVTLYYVGPGGDRTKPVATTQAVYRGQGLPVGLYVAYATFDRAGGWEAEI
CCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHCCCCCCEEEEEEEEEHCCCCCCEEEE
TIPQTDGPQSSRIRLDVSERAFAPMVGDRAIPVQNLTAADVPALDQLTSDPRPDPDFYQM
EECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHH
TIAEAMKAGKPFVVSFATPGYCQTAVCAPNMAVLKQLKSEFGDRVNFIHVEVYPYPFGES
HHHHHHHCCCCEEEEECCCCCCCCEECCCCHHHHHHHHHHHCCCEEEEEEEEEECCCCCH
FQQARMVDAMKEWNLRTEPWTFLVDRDGIIQARYEGGITFAELRPAIAQLAEGQPVNPAP
HHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEECCCEEHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA