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The map label for this gene is 222523839

Identifier: 222523839

GI number: 222523839

Start: 653300

End: 654298

Strand: Reverse

Name: 222523839

Synonym: Chy400_0547

Alternate gene names: NA

Gene position: 654298-653300 (Counterclockwise)

Preceding gene: 222523840

Following gene: 222523838

Centisome position: 12.42

GC content: 51.75

Gene sequence:

>999_bases
ATGGATTTGTTGCTCTCGCCTGAGATGATGCCGGTGACGTTGGGTGCCCTGGGGTTACTTCTGTTTCTGTTGGTGATCAC
TGTCGTTGTGTTAATGCGTCAGTCGGCAACTGCGGATGTGGCACAGCGCCTGGAAACGTTTGCCGGCGGTAAAGCCCAGG
AACGCTCAAATGAGCCGATTGCACGTCAGGCTATTGAACGTATTGATGCTGTCGTTGCGAAGAGTAAGCAGGGTAGCTCC
ATCCAACGCGAGCTGGCCCGTGCTGATTTGAAGCTGACAGTAGCAGAGTTTATTGGTTTGAAGCTCGGTGCTGCTCTGCT
TGGCGTGGTATTTGGTTTCATTTTGGGACGCGCAAATTTTCTGGCTCAGATCGGAGCTGCTACTGCCGCGGCCATTGTGT
TCTCGTTTCTGCCGAATCTCTATGTCAACATGCGTGCAGCGCAGCGGATCAAGGCCTTCAACAATCAGTTGGGCGACGTT
ATCACTATGATGGCGAATGCCTTGCGTGGCGGCTACAGCTTTCTACAAACCCTCGATATGGTTTCGCGGGAAGCGCCACC
GCCGGCTGCAACTGAATTTCGCCGTGTTGTCCAGGAAGTTGGTCTTGGTCGCTCAACGGAAGAGGCGTTACAGAATCTTT
TGCGTCGCATGCCATCTGATGACCTCGATCTCTTGATTACGGCAGTAACTATTCAGATGGAGGTCGGTGGTAATCTGGCC
CAAATCCTTGATACTATCGGTCATACCATCCGTGAACGAGTGCGGATCAAGGGTGAGATTTCAACGCTTACTGCGCAGGG
GCGCATCTCATCGTGGATCATTACCGGTTTGCCGATTGGTCTGGCAATGTTTATCACGGTTGTCAATCCTGACTATATGG
CCCCGCTCTTCACGTTTGGTTTTCCGCCTCAAGCATGGTGTTGTATGCCGGTAGCGTCACTGTTTATGATTGCGATGGGC
TACTTTGCCATCCAAAAGATTATCGATATCGAAGTGTGA

Upstream 100 bases:

>100_bases
GCTCAACATCTTCCTGCCGCCGACCATTTTTGGCTCGTCGGAACGTTTCAGTTTCTAACTACCGCGACGATTGGCGGCGT
GAGAAGGAGGTGGCGCACGT

Downstream 100 bases:

>100_bases
GGTGCGGCGATGATGGATTTGTTGATCGTAGCCGGGATTGTCGTCATAGGGGCGTCGCTGATCATCGTTGCCGTCAGACA
GATGAATCAGTCGCGAGCGA

Product: type II secretion system protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadB; Type II Secretion System F Domain Protein; Integral Membrane Protein; Pilus Assembly Protein; Type II Secretion System F Domain-Containing Protein; Flp Pilus Assembly Protein; Type II Secretion System Protein F; Type II Secretion System F Domain; Bacterial Type II Secretion System Protein F Domain; Pilus Assembly Protein TadB; Type II/IV Secretion System Protein TadC Subfamily; TadB Protein; Type II Secretion System; Tad Secretion System Pilus Assembly Protein; Secretion System Protein; Type II Secretion System Protein F Domain; Secretion System Protein TadB; Tight Adherence TadB-Related Transmembrane Protein; Bacterial Type II Secretion System Protein F Domain Protein; Flp Pilus Assembly Protein TadB-Like Protein; Flp Pilus Assembly Protein TadC; TadB-Like Pilus Assembly Protein; Type II Secretion System F Protein; Tad Secretion System Secretion Accessory Protein; Component Of Type IV Pilus; Type II Secretion System Integral Membrane Subunit; Tight Adherence TadB-Like Transmembrane Protein; Components Of Type IV Pilus; TadC Family Type II/IV Secretion System Protein

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MDLLLSPEMMPVTLGALGLLLFLLVITVVVLMRQSATADVAQRLETFAGGKAQERSNEPIARQAIERIDAVVAKSKQGSS
IQRELARADLKLTVAEFIGLKLGAALLGVVFGFILGRANFLAQIGAATAAAIVFSFLPNLYVNMRAAQRIKAFNNQLGDV
ITMMANALRGGYSFLQTLDMVSREAPPPAATEFRRVVQEVGLGRSTEEALQNLLRRMPSDDLDLLITAVTIQMEVGGNLA
QILDTIGHTIRERVRIKGEISTLTAQGRISSWIITGLPIGLAMFITVVNPDYMAPLFTFGFPPQAWCCMPVASLFMIAMG
YFAIQKIIDIEV

Sequences:

>Translated_332_residues
MDLLLSPEMMPVTLGALGLLLFLLVITVVVLMRQSATADVAQRLETFAGGKAQERSNEPIARQAIERIDAVVAKSKQGSS
IQRELARADLKLTVAEFIGLKLGAALLGVVFGFILGRANFLAQIGAATAAAIVFSFLPNLYVNMRAAQRIKAFNNQLGDV
ITMMANALRGGYSFLQTLDMVSREAPPPAATEFRRVVQEVGLGRSTEEALQNLLRRMPSDDLDLLITAVTIQMEVGGNLA
QILDTIGHTIRERVRIKGEISTLTAQGRISSWIITGLPIGLAMFITVVNPDYMAPLFTFGFPPQAWCCMPVASLFMIAMG
YFAIQKIIDIEV
>Mature_332_residues
MDLLLSPEMMPVTLGALGLLLFLLVITVVVLMRQSATADVAQRLETFAGGKAQERSNEPIARQAIERIDAVVAKSKQGSS
IQRELARADLKLTVAEFIGLKLGAALLGVVFGFILGRANFLAQIGAATAAAIVFSFLPNLYVNMRAAQRIKAFNNQLGDV
ITMMANALRGGYSFLQTLDMVSREAPPPAATEFRRVVQEVGLGRSTEEALQNLLRRMPSDDLDLLITAVTIQMEVGGNLA
QILDTIGHTIRERVRIKGEISTLTAQGRISSWIITGLPIGLAMFITVVNPDYMAPLFTFGFPPQAWCCMPVASLFMIAMG
YFAIQKIIDIEV

Specific function: Unknown

COG id: COG4965

COG function: function code U; Flp pilus assembly protein TadB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36071; Mature: 36071

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLLLSPEMMPVTLGALGLLLFLLVITVVVLMRQSATADVAQRLETFAGGKAQERSNEPI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHCCCCCH
ARQAIERIDAVVAKSKQGSSIQRELARADLKLTVAEFIGLKLGAALLGVVFGFILGRANF
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAQIGAATAAAIVFSFLPNLYVNMRAAQRIKAFNNQLGDVITMMANALRGGYSFLQTLDM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSREAPPPAATEFRRVVQEVGLGRSTEEALQNLLRRMPSDDLDLLITAVTIQMEVGGNLA
HHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHEEECCCCCHH
QILDTIGHTIRERVRIKGEISTLTAQGRISSWIITGLPIGLAMFITVVNPDYMAPLFTFG
HHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
FPPQAWCCMPVASLFMIAMGYFAIQKIIDIEV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDLLLSPEMMPVTLGALGLLLFLLVITVVVLMRQSATADVAQRLETFAGGKAQERSNEPI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHCCCCCH
ARQAIERIDAVVAKSKQGSSIQRELARADLKLTVAEFIGLKLGAALLGVVFGFILGRANF
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAQIGAATAAAIVFSFLPNLYVNMRAAQRIKAFNNQLGDVITMMANALRGGYSFLQTLDM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSREAPPPAATEFRRVVQEVGLGRSTEEALQNLLRRMPSDDLDLLITAVTIQMEVGGNLA
HHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHEEECCCCCHH
QILDTIGHTIRERVRIKGEISTLTAQGRISSWIITGLPIGLAMFITVVNPDYMAPLFTFG
HHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCC
FPPQAWCCMPVASLFMIAMGYFAIQKIIDIEV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA