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The map label for this gene is 222523838

Identifier: 222523838

GI number: 222523838

Start: 652355

End: 653290

Strand: Reverse

Name: 222523838

Synonym: Chy400_0546

Alternate gene names: NA

Gene position: 653290-652355 (Counterclockwise)

Preceding gene: 222523839

Following gene: 222523837

Centisome position: 12.4

GC content: 52.67

Gene sequence:

>936_bases
ATGATGGATTTGTTGATCGTAGCCGGGATTGTCGTCATAGGGGCGTCGCTGATCATCGTTGCCGTCAGACAGATGAATCA
GTCGCGAGCGATTAGTGAGCGTCTCGATCAGTATACCGATATTTCACTTTCGCTCGAAGAGCTGGAATTGCAGCAACCGT
TCCGTGAACGGGTATTGGTACCGCTGTTTCGCTCGTTGCTGAATACGCTTGGCCGCTTCGGTCTGAAACAGAATCAAGAG
CGCTTGCGGATCAATCTTCAGTTGGCCGGCAACCCCGGTAATATCTCGCCCAATATGTTTATCGGGCTGCGCATGGCACT
GGCGATTGTCTTGTTTGTCGTTATTGGCTTGCTGGTTTTTGGACGATTGCCATTCATGCAGGCTTTGATGGGTGCTCTGA
TCGCTGGGATGATTGGTTATATTCTGCCCGGCATCTGGCTCGACCGCAAGATTAAGGAGCGCAAAAAGAATATCCTGAAG
GCATTGCCTGACGCGCTGGATTTGCTCTGTATCAGCGTTGAAGCCGGTCTGGCGTTCGATCTCGCGCTTCAGCGCGTTGC
CCAAAAATGGGATAATGAGTTGTCGCGTGAATTTCAGCGCGTTCTGCAGGATATTCGTCTCGGTCGTACCCGCCGCGAAG
CTTTGCGTGATCTAGTCACCCGCACCGGTGTTGAAGATGTACAGACCTTCGTCTCGGCTGTGATCCAGGCTGACCAACTG
GGTGTGTCGATGTCGAAGATTCTGCGCATCCAATCAGACCAGTTGCGTGTCCGCCGTCGCCAGCGCGCTGAAGAGGCAGC
TCAGAAGGCGCCAGTGAAGATGCTGATTCCGATGGTGTTCCTGATTTTCCCCGCATTGTTTGTGGTGATTTTGGGACCGG
CAGTACCGCGGATTATGCAGGCACTTGGTGTGATGAATAGTGGGATGGGAAATTAA

Upstream 100 bases:

>100_bases
TCAAGCATGGTGTTGTATGCCGGTAGCGTCACTGTTTATGATTGCGATGGGCTACTTTGCCATCCAAAAGATTATCGATA
TCGAAGTGTGAGGTGCGGCG

Downstream 100 bases:

>100_bases
GGCTCGTATGGTACAGGTTGTGAATCAGACCCGACGCGCCATCCTTGCCAGTCAGTGCGAGGTGGCGCGCTCGTTTTTCG
CCCGTGGTCGCGGTCTGCTT

Product: type II secretion system protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadC; Type II Secretion System F Domain Protein; Integral Membrane Protein; Type II/IV Secretion System Protein TadC Subfamily; Type II Secretion System F Domain-Containing Protein; Flp Pilus Assembly Protein; Type II Secretion System Protein F; Type II Secretion System F Domain; Pilus Assembly Protein; TadC Protein; Tad Secretion System Secretion Accessory Protein; Bacterial Type II Secretion System Protein F Domain; Tight Adherence TadC-Like Transmembrane Protein; Pilus Component Protein; Type II Secretion System; Type II Secretion System Protein F Domain Protein; TadC Pilus Assembly Protein; TadC Family Type II/IV Secretion System Protein; TadC Component Of Type IV Pilus; Type II Secretion System Protein F Domain; Tight Adherence TadC-Related Transmembrane Protein; Secretion System Protein TadC; Tyrosine Phenol-Lyase; Fimbriae-Related Membrane Protein; Pilus Assembly Protein TadC; Putative Tight Adherence TadC-Like Transmembrane Protein; TadC Subunit; Components Of Type IV Pilus TadC; Pilus Assemble Protein; Type II Secretion System F Protein; Component Of Type IV Pilus; Von Willebrand Factor Type A; Component Of Pilus Protein; Type II Secretion System Integral Membrane Subunit; Components Of Type IV Pilus

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MMDLLIVAGIVVIGASLIIVAVRQMNQSRAISERLDQYTDISLSLEELELQQPFRERVLVPLFRSLLNTLGRFGLKQNQE
RLRINLQLAGNPGNISPNMFIGLRMALAIVLFVVIGLLVFGRLPFMQALMGALIAGMIGYILPGIWLDRKIKERKKNILK
ALPDALDLLCISVEAGLAFDLALQRVAQKWDNELSREFQRVLQDIRLGRTRREALRDLVTRTGVEDVQTFVSAVIQADQL
GVSMSKILRIQSDQLRVRRRQRAEEAAQKAPVKMLIPMVFLIFPALFVVILGPAVPRIMQALGVMNSGMGN

Sequences:

>Translated_311_residues
MMDLLIVAGIVVIGASLIIVAVRQMNQSRAISERLDQYTDISLSLEELELQQPFRERVLVPLFRSLLNTLGRFGLKQNQE
RLRINLQLAGNPGNISPNMFIGLRMALAIVLFVVIGLLVFGRLPFMQALMGALIAGMIGYILPGIWLDRKIKERKKNILK
ALPDALDLLCISVEAGLAFDLALQRVAQKWDNELSREFQRVLQDIRLGRTRREALRDLVTRTGVEDVQTFVSAVIQADQL
GVSMSKILRIQSDQLRVRRRQRAEEAAQKAPVKMLIPMVFLIFPALFVVILGPAVPRIMQALGVMNSGMGN
>Mature_311_residues
MMDLLIVAGIVVIGASLIIVAVRQMNQSRAISERLDQYTDISLSLEELELQQPFRERVLVPLFRSLLNTLGRFGLKQNQE
RLRINLQLAGNPGNISPNMFIGLRMALAIVLFVVIGLLVFGRLPFMQALMGALIAGMIGYILPGIWLDRKIKERKKNILK
ALPDALDLLCISVEAGLAFDLALQRVAQKWDNELSREFQRVLQDIRLGRTRREALRDLVTRTGVEDVQTFVSAVIQADQL
GVSMSKILRIQSDQLRVRRRQRAEEAAQKAPVKMLIPMVFLIFPALFVVILGPAVPRIMQALGVMNSGMGN

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34832; Mature: 34832

Theoretical pI: Translated: 11.15; Mature: 11.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDLLIVAGIVVIGASLIIVAVRQMNQSRAISERLDQYTDISLSLEELELQQPFRERVLV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
PLFRSLLNTLGRFGLKQNQERLRINLQLAGNPGNISPNMFIGLRMALAIVLFVVIGLLVF
HHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
GRLPFMQALMGALIAGMIGYILPGIWLDRKIKERKKNILKALPDALDLLCISVEAGLAFD
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LALQRVAQKWDNELSREFQRVLQDIRLGRTRREALRDLVTRTGVEDVQTFVSAVIQADQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
GVSMSKILRIQSDQLRVRRRQRAEEAAQKAPVKMLIPMVFLIFPALFVVILGPAVPRIMQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALGVMNSGMGN
HHHHHHCCCCC
>Mature Secondary Structure
MMDLLIVAGIVVIGASLIIVAVRQMNQSRAISERLDQYTDISLSLEELELQQPFRERVLV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
PLFRSLLNTLGRFGLKQNQERLRINLQLAGNPGNISPNMFIGLRMALAIVLFVVIGLLVF
HHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
GRLPFMQALMGALIAGMIGYILPGIWLDRKIKERKKNILKALPDALDLLCISVEAGLAFD
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LALQRVAQKWDNELSREFQRVLQDIRLGRTRREALRDLVTRTGVEDVQTFVSAVIQADQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
GVSMSKILRIQSDQLRVRRRQRAEEAAQKAPVKMLIPMVFLIFPALFVVILGPAVPRIMQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALGVMNSGMGN
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA