| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523837
Identifier: 222523837
GI number: 222523837
Start: 651991
End: 652347
Strand: Reverse
Name: 222523837
Synonym: Chy400_0545
Alternate gene names: NA
Gene position: 652347-651991 (Counterclockwise)
Preceding gene: 222523838
Following gene: 222523836
Centisome position: 12.38
GC content: 53.78
Gene sequence:
>357_bases ATGGTACAGGTTGTGAATCAGACCCGACGCGCCATCCTTGCCAGTCAGTGCGAGGTGGCGCGCTCGTTTTTCGCCCGTGG TCGCGGTCTGCTTGGCCGCCAGTCATTGCCGGTCGGTGGTGGCCTGTTGATTGAACCGTGTAATAGCATTCATATGCTGT TTATGCGGTTTGCTATCGACGCAATCTTTGTTGATCGGAACGGTACCGTTGTGGCACTGTATCCCGATTTACCGCCATGG CGCATCTATGCCGGTCATCGCCAGGCTCGCTATGTGCTTGAATTGCCGGTGGGTGTGATTGCAGCAACTAACACGGTAGT TGGCGATCAGATTGTGGTTCAAGAGCTACAAGAATAA
Upstream 100 bases:
>100_bases ATTTTCCCCGCATTGTTTGTGGTGATTTTGGGACCGGCAGTACCGCGGATTATGCAGGCACTTGGTGTGATGAATAGTGG GATGGGAAATTAAGGCTCGT
Downstream 100 bases:
>100_bases CACTGTTGCCTCAGCGATCAACAAGTGCCACGGTAACACCCCGGTGTGCAGTACAGGCCCTCTGCTTGTATTCCATCAGC TCACACGTATTAGTTACAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MVQVVNQTRRAILASQCEVARSFFARGRGLLGRQSLPVGGGLLIEPCNSIHMLFMRFAIDAIFVDRNGTVVALYPDLPPW RIYAGHRQARYVLELPVGVIAATNTVVGDQIVVQELQE
Sequences:
>Translated_118_residues MVQVVNQTRRAILASQCEVARSFFARGRGLLGRQSLPVGGGLLIEPCNSIHMLFMRFAIDAIFVDRNGTVVALYPDLPPW RIYAGHRQARYVLELPVGVIAATNTVVGDQIVVQELQE >Mature_118_residues MVQVVNQTRRAILASQCEVARSFFARGRGLLGRQSLPVGGGLLIEPCNSIHMLFMRFAIDAIFVDRNGTVVALYPDLPPW RIYAGHRQARYVLELPVGVIAATNTVVGDQIVVQELQE
Specific function: Unknown
COG id: COG1430
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0127 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003795 - InterPro: IPR022906 [H]
Pfam domain/function: PF02643 DUF192 [H]
EC number: NA
Molecular weight: Translated: 13047; Mature: 13047
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQVVNQTRRAILASQCEVARSFFARGRGLLGRQSLPVGGGLLIEPCNSIHMLFMRFAID CCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHH AIFVDRNGTVVALYPDLPPWRIYAGHRQARYVLELPVGVIAATNTVVGDQIVVQELQE EEEECCCCEEEEECCCCCCEEEEECCCCCEEEEECCCCEEEECCCCCCHHHHHHHHCC >Mature Secondary Structure MVQVVNQTRRAILASQCEVARSFFARGRGLLGRQSLPVGGGLLIEPCNSIHMLFMRFAID CCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHH AIFVDRNGTVVALYPDLPPWRIYAGHRQARYVLELPVGVIAATNTVVGDQIVVQELQE EEEECCCCEEEEECCCCCCEEEEECCCCCEEEEECCCCEEEECCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]