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The map label for this gene is dac [H]

Identifier: 222523676

GI number: 222523676

Start: 449976

End: 450710

Strand: Reverse

Name: dac [H]

Synonym: Chy400_0382

Alternate gene names: 222523676

Gene position: 450710-449976 (Counterclockwise)

Preceding gene: 222523677

Following gene: 222523674

Centisome position: 8.55

GC content: 59.05

Gene sequence:

>735_bases
ATGCAGCAAACACAGAGCGAACCAAAAACAGCATTAGTCGTTGTTGCCCATCCTGACGACGCCGAATTTGGTTGTGGTGG
CACGCTGGCAGCGTGGGCGGCGGAGGGCTGGGAAATTACCCTGGTGGTTTGTACCGATGGCAGTGGTGGTGGCCCCGATG
ATGCCACCGATGTTGGTCCGGCGGCCCGACGACGGATCAGCGAGATACGCAAGGCTGAGCAGCAGGCGGCGGCGAAGATT
CTCGGCCTGAAAGAGGTGATCTTTCTCGATTACCCCGACGGTATGCTGCAACCGACGCTTGAGTTGCGGCGTGATATTGT
GCGTCAGATCAGGCGTATCCGGGCGCAGCGCGTCGTCTGTCAGTCGCCAGACCGGGTGTGGACACCACAATATTCAATTC
CGCGCTTTCATCCCGATCATCTGGCAGCCGCTAACGCGACTCTGGCGGCGGTCTATCCAGCAGCGCAGAACGGCTGGGAT
TTTCCCGAATTACTGGCCGAAGGCTATCCACCGAGCAAGGTGCGTGAAGTCTATATTACCGGCGCACCGGTGTTAAACTT
TGCGGTAGACATCAGCGCTACCATCGAGCAGAAACTGGCTGCGTTGCGCTGCCATGTCTCGCAGTTGGGCACCGATCAGA
CCGAACTGGCCGGGCGGGTACGGCAGTGGGCTGCCGAGCGGGGACAAGAGTTTGGTCTCCCACTGGCCGAAGCGTTTCAT
CGAGTCGAGAATTAA

Upstream 100 bases:

>100_bases
CAGTGCCACCCACGTTGTTGGCTACTGACATCGGTTATCGTGATGTAGCAAGAGTCATGGTATGCTACTTATCAGCACAA
CAACCTGATAAGGAGTTACC

Downstream 100 bases:

>100_bases
GCGCATGCATTTGACGCTAACGCCAGACTCGGCTATACTACTTCTGGCGGGCCGGTAGCTCAGAGGTAGAGCACCTGACT
TTTAATCAGAGGGTCGTGGG

Product: LmbE family protein

Products: NA

Alternate protein names: N-acetylchitobiose deacetylase; Tk-Dac [H]

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MQQTQSEPKTALVVVAHPDDAEFGCGGTLAAWAAEGWEITLVVCTDGSGGGPDDATDVGPAARRRISEIRKAEQQAAAKI
LGLKEVIFLDYPDGMLQPTLELRRDIVRQIRRIRAQRVVCQSPDRVWTPQYSIPRFHPDHLAAANATLAAVYPAAQNGWD
FPELLAEGYPPSKVREVYITGAPVLNFAVDISATIEQKLAALRCHVSQLGTDQTELAGRVRQWAAERGQEFGLPLAEAFH
RVEN

Sequences:

>Translated_244_residues
MQQTQSEPKTALVVVAHPDDAEFGCGGTLAAWAAEGWEITLVVCTDGSGGGPDDATDVGPAARRRISEIRKAEQQAAAKI
LGLKEVIFLDYPDGMLQPTLELRRDIVRQIRRIRAQRVVCQSPDRVWTPQYSIPRFHPDHLAAANATLAAVYPAAQNGWD
FPELLAEGYPPSKVREVYITGAPVLNFAVDISATIEQKLAALRCHVSQLGTDQTELAGRVRQWAAERGQEFGLPLAEAFH
RVEN
>Mature_244_residues
MQQTQSEPKTALVVVAHPDDAEFGCGGTLAAWAAEGWEITLVVCTDGSGGGPDDATDVGPAARRRISEIRKAEQQAAAKI
LGLKEVIFLDYPDGMLQPTLELRRDIVRQIRRIRAQRVVCQSPDRVWTPQYSIPRFHPDHLAAANATLAAVYPAAQNGWD
FPELLAEGYPPSKVREVYITGAPVLNFAVDISATIEQKLAALRCHVSQLGTDQTELAGRVRQWAAERGQEFGLPLAEAFH
RVEN

Specific function: Deacylates the non-reducing end of diacetylchitobiose (GlcNAc2). Can also use N-acetylglucosamine (GlcNAc) and N- acetylchitotriose (GlcNAc3). Probably involved in chitin degradation [H]

COG id: COG2120

COG function: function code S; Uncharacterized proteins, LmbE homologs

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PIGL family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003737 [H]

Pfam domain/function: PF02585 PIG-L [H]

EC number: NA

Molecular weight: Translated: 26718; Mature: 26718

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQTQSEPKTALVVVAHPDDAEFGCGGTLAAWAAEGWEITLVVCTDGSGGGPDDATDVGP
CCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCH
AARRRISEIRKAEQQAAAKILGLKEVIFLDYPDGMLQPTLELRRDIVRQIRRIRAQRVVC
HHHHHHHHHHHHHHHHHHHHHCHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QSPDRVWTPQYSIPRFHPDHLAAANATLAAVYPAAQNGWDFPELLAEGYPPSKVREVYIT
CCCCCEECCCCCCCCCCCHHHHHCCCCEEEEECCCCCCCCCHHHHHCCCCCCHHEEEEEE
GAPVLNFAVDISATIEQKLAALRCHVSQLGTDQTELAGRVRQWAAERGQEFGLPLAEAFH
CCCHHHHEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHCCCCHHHHHH
RVEN
HHCC
>Mature Secondary Structure
MQQTQSEPKTALVVVAHPDDAEFGCGGTLAAWAAEGWEITLVVCTDGSGGGPDDATDVGP
CCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCH
AARRRISEIRKAEQQAAAKILGLKEVIFLDYPDGMLQPTLELRRDIVRQIRRIRAQRVVC
HHHHHHHHHHHHHHHHHHHHHCHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QSPDRVWTPQYSIPRFHPDHLAAANATLAAVYPAAQNGWDFPELLAEGYPPSKVREVYIT
CCCCCEECCCCCCCCCCCHHHHHCCCCEEEEECCCCCCCCCHHHHHCCCCCCHHEEEEEE
GAPVLNFAVDISATIEQKLAALRCHVSQLGTDQTELAGRVRQWAAERGQEFGLPLAEAFH
CCCHHHHEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHCCCCHHHHHH
RVEN
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA