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The map label for this gene is csmJ [H]

Identifier: 222523677

GI number: 222523677

Start: 450840

End: 451451

Strand: Reverse

Name: csmJ [H]

Synonym: Chy400_0383

Alternate gene names: 222523677

Gene position: 451451-450840 (Counterclockwise)

Preceding gene: 222523681

Following gene: 222523676

Centisome position: 8.57

GC content: 58.33

Gene sequence:

>612_bases
ATGGCGACAGTCATCGTGAACGATGTCGAAATGACGGCCCGTCCCGGTGAACGCATTCTCGACATTGCACGTCGCAACAG
TGCGCACATCGGGTTCGTCTGTGATGGCACCGGTTTTTGTCAGACCTGCAAGGTGCGGGTGCTGGCAGGGGCTGAGTTTC
TCAGCCCACCGAATGATCGGGAGAAGAACTGGCTGCCAGATGCACGTCTCCAGGAAGGATGGCGTCTCGGTTGCCAGGCG
TCAGTACGCGGCAAAGGGCCGATTGCGGTGATTACCAACGCCGAGGAATTGCGGCTCCAGGCGTTTGCTGCTATCAACCC
ACCTGCCGGCTCCAGCGTGGCAACGAATGTCAGTTCGCTGATCACCAATCTGACGCAGCAGAGTATCGATCAACTGGTCG
GCTACCCGTGGAATATGTTGAACGCGATTGCGACAATTGGATTGGGACGGATCATTAATCCCTGGCAATCGATGGAGCGT
TTCAGTCAGTGGTTGACCGATATTGGGAAAGTCGTAGAGCAGACCCTCAATTCGCCGGCACCAGCCCCGCCGAGTGACCC
GCTGGCACGGGTGCGGGCAGCCGCTGCTGAGGTACGGCGGGCGAGTGAATAA

Upstream 100 bases:

>100_bases
CACCGTATAGTATTTCCACTCGTATAGGTATCATACCACTATATTAAGCCAAAATCGCGTTACAATGAATATACACACTT
TTTGCTAAAGGAGAACAGGT

Downstream 100 bases:

>100_bases
TTGATCTGGGTGGCGTTGTTGCAAGTTAACAGTGCCACCCACGTTGTTGGCTACTGACATCGGTTATCGTGATGTAGCAA
GAGTCATGGTATGCTACTTA

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MATVIVNDVEMTARPGERILDIARRNSAHIGFVCDGTGFCQTCKVRVLAGAEFLSPPNDREKNWLPDARLQEGWRLGCQA
SVRGKGPIAVITNAEELRLQAFAAINPPAGSSVATNVSSLITNLTQQSIDQLVGYPWNMLNAIATIGLGRIINPWQSMER
FSQWLTDIGKVVEQTLNSPAPAPPSDPLARVRAAAAEVRRASE

Sequences:

>Translated_203_residues
MATVIVNDVEMTARPGERILDIARRNSAHIGFVCDGTGFCQTCKVRVLAGAEFLSPPNDREKNWLPDARLQEGWRLGCQA
SVRGKGPIAVITNAEELRLQAFAAINPPAGSSVATNVSSLITNLTQQSIDQLVGYPWNMLNAIATIGLGRIINPWQSMER
FSQWLTDIGKVVEQTLNSPAPAPPSDPLARVRAAAAEVRRASE
>Mature_202_residues
ATVIVNDVEMTARPGERILDIARRNSAHIGFVCDGTGFCQTCKVRVLAGAEFLSPPNDREKNWLPDARLQEGWRLGCQAS
VRGKGPIAVITNAEELRLQAFAAINPPAGSSVATNVSSLITNLTQQSIDQLVGYPWNMLNAIATIGLGRIINPWQSMERF
SQWLTDIGKVVEQTLNSPAPAPPSDPLARVRAAAAEVRRASE

Specific function: Could play a direct role in the oxidation or reduction of the quenching species formed in the chlorosome [H]

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Chlorosome [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 21987; Mature: 21856

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATVIVNDVEMTARPGERILDIARRNSAHIGFVCDGTGFCQTCKVRVLAGAEFLSPPNDR
CCEEEEECCHHCCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHEECHHHCCCCCCC
EKNWLPDARLQEGWRLGCQASVRGKGPIAVITNAEELRLQAFAAINPPAGSSVATNVSSL
CCCCCCCHHHHHHHHCCCEEECCCCCCEEEEECHHHHHHHHHHCCCCCCCCHHHHHHHHH
ITNLTQQSIDQLVGYPWNMLNAIATIGLGRIINPWQSMERFSQWLTDIGKVVEQTLNSPA
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PAPPSDPLARVRAAAAEVRRASE
CCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ATVIVNDVEMTARPGERILDIARRNSAHIGFVCDGTGFCQTCKVRVLAGAEFLSPPNDR
CEEEEECCHHCCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHEECHHHCCCCCCC
EKNWLPDARLQEGWRLGCQASVRGKGPIAVITNAEELRLQAFAAINPPAGSSVATNVSSL
CCCCCCCHHHHHHHHCCCEEECCCCCCEEEEECHHHHHHHHHHCCCCCCCCHHHHHHHHH
ITNLTQQSIDQLVGYPWNMLNAIATIGLGRIINPWQSMERFSQWLTDIGKVVEQTLNSPA
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PAPPSDPLARVRAAAAEVRRASE
CCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11148041; 12093901 [H]