| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is lon [H]
Identifier: 222523621
GI number: 222523621
Start: 392540
End: 394912
Strand: Reverse
Name: lon [H]
Synonym: Chy400_0327
Alternate gene names: 222523621
Gene position: 394912-392540 (Counterclockwise)
Preceding gene: 222523622
Following gene: 222523620
Centisome position: 7.5
GC content: 59.17
Gene sequence:
>2373_bases GTGAATGATCCAAACCCAATGCAACGTCCGCCTATGCCGGAGATACCGGATGTCTTGCCGGTATTGCCGATTAACAACGC GATCCTGTTCCCCGGCATGTTTTTGCCGCTGGTGGTGAGTGGTGAAGCCTGGGTACGGCTGGTTGACGAGGCAGCACTCT CTACCAAGATCATCGGCGTCTTCCGCCGCATTCAGTCCGGCGCCGAGTTTGAGCCGGAGATGCTGGCCCAGACCGGCACG GCAGCCTTAATTGTGCGGATGATGCGCCTGCCCCAGGGTGGCGTGCAACTGTTGTTGCAAGGGCAGGCCCGGATCAAGGT GCAGCGGTGGGTGACCGTCAAGCCATATCCCCAGGCGCACGTTACGGTCGCTCTCGATCCAGTTGATGTTTCGATGGAGA CCACCGGCCTGGCGCGAGCGGTACTGGCAGGTTTCCAGCAGATCGTTGAGCAAAGTCCGAATTTGCCCGATGAACTGGCG ATTGCCGCCGCGAACGCTCCCCATCCGGGCATGCTGGCCGATCTGATCGCGGCCAACCTGAATCTGAATCTCGACGATCA GCAAAAGGTTCTCGACACGTTTGATGTGCATGAGCGGCTGCAACTGGTGTTGCGTCTGCTTGAGCGTGAGCGCGAAATCC TGTTAATTGGCCGCAAAGCCCAGGAAGAGGTCTCGAAGAACCAGCGCGAATACGTGTTACGGCAACAGCTCGAGGCAATC AAGCGCGAGCTAGGCGAAACCGATGATCATGCCGCTGAAATTGCCGAGTTGCGGCGGCGCATCGAAGAGGCCAATCTACC GGCTGAAGCCCGTCAGGAAGCAGAGCGCGAGCTGTTGCGCCTTGAACGGATGCCCCCTGGCGCAGCCGAATACACCGTTG CCCGCACCTACCTCGACTGGCTGCTCGATCTGCCGTGGCACACCAGCACCGAGGACAATCTCGATATTACCCAGGCCCGC CAGGTACTTGATGAAGACCACTACGATCTCGAACGCATCAAAGAGCGGATTATCGAGTATCTGGCGGTACGCAAATTACG CCGGGAAGAAGGTGCTGACAACGAGGCGCGTGGTCCGATCCTCTGCTTCGTCGGTCCGCCCGGCGTGGGCAAGACGAGTC TGGGCGCGTCAATTGCCCGGGCGTTAGGGCGTAAGTTTGTCCGGGTTGCCCTCGGTGGTGTACGCGATGAGGCCGAAATT CGTGGTCATCGTCGCACTTACATCGGTGCCCTGCCCGGTCGGATTATCCAGGGGCTGAGTCGGGCCAAGAGTAACAATCC GGTGCTGCTGCTCGATGAGGTGGATAAGCTCAGCATCGGCTTTCAGGGCGATCCGGCAGCGGCACTACTCGAAGTGCTCG ATCCTGAACAGAATGTCGCGTTCGTTGATCGTTACCTGGATGTACCGTTTGATCTGAGTAAAGTACTCTTTGTTTGTACG GCCAACCGGGCTGATACCATCCCGCCGGCGTTGCTCGACCGGATGGAACTGCTGGAACTTGCCGGTTACACCGAACAAGA AAAGCTGGAAATAGCCCGTCGCTATCTCATCCCGCGCCAGCGCCGTGAACAGGGCATGACAAATCGCGGGCCAGAGTTGA CCACAGCCGCCTTGCAGCGTCTCATTCGCGAATACACGCATGAAGCCGGCGTTCGTGATCTGGAACGGCGGATTGGGGCG ATCTATCGCAAGATGGCGACCCGTCTGGCCTCGGAACAGACGCTACCCGATCAGGTTGATGCGGCTGATCTCGACGACCT GCTAGGGCCGCCGCGCTTCCGCAGCGAGACCATCCTCGGCGACAATGAAGTGGGGGTGGTTACCGGGCTGGCCTGGACAC CGACCGGCGGTGACGTGCTCTTCGTTGAGGTGAGTGTCATTCCGGGCAATGGTCAGCTCATCCTGACCGGTCAATTGGGT GATGTGATGAAAGAATCGGCGCGGGCCGCCCTGACCTACGCCCGTTCGCGCGCATCCGCTCTGGGTATCGATCCAGAGGT CTTCCAGAAGAGTGACATTCACATTCACGTGCCGGCCGGTGCTGTGCCGAAAGATGGCCCATCGGCAGGCATCACCATCG CCAGTGCGCTCATCTCGGCGCTGACCAGACGCGAAGTTGACAAACGGATCGCGATGACCGGTGAAGTAACCCTCCGTGGC AAGGTATTGCCTATCGGCGGTGTCAAAGAAAAACTACTTGCCGCGCAGCGGGCCGGTGTGCGCAAAGTTCTGCTCCCTAC CGAAAACGAGATCGACCTTCGCGACGTACCTGCCGAAACGAAGGAGCAGTTGGAGATTGTGCTGGTCAAGCATATGGACG AGGTACTGCACGAACTGGGTCTGGAAATTGCCCCGCAACCGGTGAGTGAGTAA
Upstream 100 bases:
>100_bases CCAGTGCTCGCTCGGTGCATGGGTTGCTTGAGATTCGCCTGCCCTTTGCCGGACGTACACTACGCCAGGTCGTTATTCCA GTGCTGGAGGGAGAACAATC
Downstream 100 bases:
>100_bases TCGAGCGACACGCTAGTGGATTGGCGTCGGCGTAGGGGCGACGCATGCGTCGCCCCTACACCTGTCATCGAATTTGATAT GATGTCCAGCCTGAAGCCCG
Product: ATP-dependent protease La
Products: NA
Alternate protein names: ATP-dependent protease La [H]
Number of amino acids: Translated: 790; Mature: 790
Protein sequence:
>790_residues MNDPNPMQRPPMPEIPDVLPVLPINNAILFPGMFLPLVVSGEAWVRLVDEAALSTKIIGVFRRIQSGAEFEPEMLAQTGT AALIVRMMRLPQGGVQLLLQGQARIKVQRWVTVKPYPQAHVTVALDPVDVSMETTGLARAVLAGFQQIVEQSPNLPDELA IAAANAPHPGMLADLIAANLNLNLDDQQKVLDTFDVHERLQLVLRLLEREREILLIGRKAQEEVSKNQREYVLRQQLEAI KRELGETDDHAAEIAELRRRIEEANLPAEARQEAERELLRLERMPPGAAEYTVARTYLDWLLDLPWHTSTEDNLDITQAR QVLDEDHYDLERIKERIIEYLAVRKLRREEGADNEARGPILCFVGPPGVGKTSLGASIARALGRKFVRVALGGVRDEAEI RGHRRTYIGALPGRIIQGLSRAKSNNPVLLLDEVDKLSIGFQGDPAAALLEVLDPEQNVAFVDRYLDVPFDLSKVLFVCT ANRADTIPPALLDRMELLELAGYTEQEKLEIARRYLIPRQRREQGMTNRGPELTTAALQRLIREYTHEAGVRDLERRIGA IYRKMATRLASEQTLPDQVDAADLDDLLGPPRFRSETILGDNEVGVVTGLAWTPTGGDVLFVEVSVIPGNGQLILTGQLG DVMKESARAALTYARSRASALGIDPEVFQKSDIHIHVPAGAVPKDGPSAGITIASALISALTRREVDKRIAMTGEVTLRG KVLPIGGVKEKLLAAQRAGVRKVLLPTENEIDLRDVPAETKEQLEIVLVKHMDEVLHELGLEIAPQPVSE
Sequences:
>Translated_790_residues MNDPNPMQRPPMPEIPDVLPVLPINNAILFPGMFLPLVVSGEAWVRLVDEAALSTKIIGVFRRIQSGAEFEPEMLAQTGT AALIVRMMRLPQGGVQLLLQGQARIKVQRWVTVKPYPQAHVTVALDPVDVSMETTGLARAVLAGFQQIVEQSPNLPDELA IAAANAPHPGMLADLIAANLNLNLDDQQKVLDTFDVHERLQLVLRLLEREREILLIGRKAQEEVSKNQREYVLRQQLEAI KRELGETDDHAAEIAELRRRIEEANLPAEARQEAERELLRLERMPPGAAEYTVARTYLDWLLDLPWHTSTEDNLDITQAR QVLDEDHYDLERIKERIIEYLAVRKLRREEGADNEARGPILCFVGPPGVGKTSLGASIARALGRKFVRVALGGVRDEAEI RGHRRTYIGALPGRIIQGLSRAKSNNPVLLLDEVDKLSIGFQGDPAAALLEVLDPEQNVAFVDRYLDVPFDLSKVLFVCT ANRADTIPPALLDRMELLELAGYTEQEKLEIARRYLIPRQRREQGMTNRGPELTTAALQRLIREYTHEAGVRDLERRIGA IYRKMATRLASEQTLPDQVDAADLDDLLGPPRFRSETILGDNEVGVVTGLAWTPTGGDVLFVEVSVIPGNGQLILTGQLG DVMKESARAALTYARSRASALGIDPEVFQKSDIHIHVPAGAVPKDGPSAGITIASALISALTRREVDKRIAMTGEVTLRG KVLPIGGVKEKLLAAQRAGVRKVLLPTENEIDLRDVPAETKEQLEIVLVKHMDEVLHELGLEIAPQPVSE >Mature_790_residues MNDPNPMQRPPMPEIPDVLPVLPINNAILFPGMFLPLVVSGEAWVRLVDEAALSTKIIGVFRRIQSGAEFEPEMLAQTGT AALIVRMMRLPQGGVQLLLQGQARIKVQRWVTVKPYPQAHVTVALDPVDVSMETTGLARAVLAGFQQIVEQSPNLPDELA IAAANAPHPGMLADLIAANLNLNLDDQQKVLDTFDVHERLQLVLRLLEREREILLIGRKAQEEVSKNQREYVLRQQLEAI KRELGETDDHAAEIAELRRRIEEANLPAEARQEAERELLRLERMPPGAAEYTVARTYLDWLLDLPWHTSTEDNLDITQAR QVLDEDHYDLERIKERIIEYLAVRKLRREEGADNEARGPILCFVGPPGVGKTSLGASIARALGRKFVRVALGGVRDEAEI RGHRRTYIGALPGRIIQGLSRAKSNNPVLLLDEVDKLSIGFQGDPAAALLEVLDPEQNVAFVDRYLDVPFDLSKVLFVCT ANRADTIPPALLDRMELLELAGYTEQEKLEIARRYLIPRQRREQGMTNRGPELTTAALQRLIREYTHEAGVRDLERRIGA IYRKMATRLASEQTLPDQVDAADLDDLLGPPRFRSETILGDNEVGVVTGLAWTPTGGDVLFVEVSVIPGNGQLILTGQLG DVMKESARAALTYARSRASALGIDPEVFQKSDIHIHVPAGAVPKDGPSAGITIASALISALTRREVDKRIAMTGEVTLRG KVLPIGGVKEKLLAAQRAGVRKVLLPTENEIDLRDVPAETKEQLEIVLVKHMDEVLHELGLEIAPQPVSE
Specific function: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced
COG id: COG0466
COG function: function code O; ATP-dependent Lon protease, bacterial type
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Lon domain [H]
Homologues:
Organism=Homo sapiens, GI31377667, Length=834, Percent_Identity=39.9280575539568, Blast_Score=574, Evalue=1e-163, Organism=Homo sapiens, GI21396489, Length=623, Percent_Identity=46.0674157303371, Blast_Score=554, Evalue=1e-157, Organism=Escherichia coli, GI1786643, Length=765, Percent_Identity=46.6666666666667, Blast_Score=671, Evalue=0.0, Organism=Caenorhabditis elegans, GI17505831, Length=716, Percent_Identity=39.6648044692737, Blast_Score=515, Evalue=1e-146, Organism=Caenorhabditis elegans, GI17556486, Length=539, Percent_Identity=43.2282003710575, Blast_Score=457, Evalue=1e-129, Organism=Saccharomyces cerevisiae, GI6319449, Length=722, Percent_Identity=38.9196675900277, Blast_Score=513, Evalue=1e-146, Organism=Drosophila melanogaster, GI221513036, Length=624, Percent_Identity=45.6730769230769, Blast_Score=540, Evalue=1e-153, Organism=Drosophila melanogaster, GI24666867, Length=624, Percent_Identity=45.6730769230769, Blast_Score=540, Evalue=1e-153,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR008269 - InterPro: IPR004815 - InterPro: IPR003111 - InterPro: IPR008268 - InterPro: IPR001984 - InterPro: IPR015947 - InterPro: IPR020568 [H]
Pfam domain/function: PF00004 AAA; PF02190 LON; PF05362 Lon_C [H]
EC number: =3.4.21.53 [H]
Molecular weight: Translated: 87458; Mature: 87458
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: PS01046 LON_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDPNPMQRPPMPEIPDVLPVLPINNAILFPGMFLPLVVSGEAWVRLVDEAALSTKIIGV CCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHEECCHHHHHHHHHHHHHHHHHHH FRRIQSGAEFEPEMLAQTGTAALIVRMMRLPQGGVQLLLQGQARIKVQRWVTVKPYPQAH HHHHHCCCCCCHHHHHHCCHHHHHHHHHHCCCCCHHEEECCCCEEEEEEEEEECCCCCCE VTVALDPVDVSMETTGLARAVLAGFQQIVEQSPNLPDELAIAAANAPHPGMLADLIAANL EEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEECCCCCCCHHHHHHHHCC NLNLDDQQKVLDTFDVHERLQLVLRLLEREREILLIGRKAQEEVSKNQREYVLRQQLEAI CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH KRELGETDDHAAEIAELRRRIEEANLPAEARQEAERELLRLERMPPGAAEYTVARTYLDW HHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH LLDLPWHTSTEDNLDITQARQVLDEDHYDLERIKERIIEYLAVRKLRREEGADNEARGPI HHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE LCFVGPPGVGKTSLGASIARALGRKFVRVALGGVRDEAEIRGHRRTYIGALPGRIIQGLS EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHCCHHHHHHHHH RAKSNNPVLLLDEVDKLSIGFQGDPAAALLEVLDPEQNVAFVDRYLDVPFDLSKVLFVCT HCCCCCCEEEEECCCCEECCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHEEE ANRADTIPPALLDRMELLELAGYTEQEKLEIARRYLIPRQRREQGMTNRGPELTTAALQR CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHH LIREYTHEAGVRDLERRIGAIYRKMATRLASEQTLPDQVDAADLDDLLGPPRFRSETILG HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCC DNEVGVVTGLAWTPTGGDVLFVEVSVIPGNGQLILTGQLGDVMKESARAALTYARSRASA CCCCEEEEEEEECCCCCCEEEEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH LGIDPEVFQKSDIHIHVPAGAVPKDGPSAGITIASALISALTRREVDKRIAMTGEVTLRG CCCCHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECEEEEEE KVLPIGGVKEKLLAAQRAGVRKVLLPTENEIDLRDVPAETKEQLEIVLVKHMDEVLHELG EEEECCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC LEIAPQPVSE CEECCCCCCC >Mature Secondary Structure MNDPNPMQRPPMPEIPDVLPVLPINNAILFPGMFLPLVVSGEAWVRLVDEAALSTKIIGV CCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHEECCHHHHHHHHHHHHHHHHHHH FRRIQSGAEFEPEMLAQTGTAALIVRMMRLPQGGVQLLLQGQARIKVQRWVTVKPYPQAH HHHHHCCCCCCHHHHHHCCHHHHHHHHHHCCCCCHHEEECCCCEEEEEEEEEECCCCCCE VTVALDPVDVSMETTGLARAVLAGFQQIVEQSPNLPDELAIAAANAPHPGMLADLIAANL EEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEECCCCCCCHHHHHHHHCC NLNLDDQQKVLDTFDVHERLQLVLRLLEREREILLIGRKAQEEVSKNQREYVLRQQLEAI CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH KRELGETDDHAAEIAELRRRIEEANLPAEARQEAERELLRLERMPPGAAEYTVARTYLDW HHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH LLDLPWHTSTEDNLDITQARQVLDEDHYDLERIKERIIEYLAVRKLRREEGADNEARGPI HHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE LCFVGPPGVGKTSLGASIARALGRKFVRVALGGVRDEAEIRGHRRTYIGALPGRIIQGLS EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHCCHHHHHHHHH RAKSNNPVLLLDEVDKLSIGFQGDPAAALLEVLDPEQNVAFVDRYLDVPFDLSKVLFVCT HCCCCCCEEEEECCCCEECCCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHEEE ANRADTIPPALLDRMELLELAGYTEQEKLEIARRYLIPRQRREQGMTNRGPELTTAALQR CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHH LIREYTHEAGVRDLERRIGAIYRKMATRLASEQTLPDQVDAADLDDLLGPPRFRSETILG HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCC DNEVGVVTGLAWTPTGGDVLFVEVSVIPGNGQLILTGQLGDVMKESARAALTYARSRASA CCCCEEEEEEEECCCCCCEEEEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH LGIDPEVFQKSDIHIHVPAGAVPKDGPSAGITIASALISALTRREVDKRIAMTGEVTLRG CCCCHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECEEEEEE KVLPIGGVKEKLLAAQRAGVRKVLLPTENEIDLRDVPAETKEQLEIVLVKHMDEVLHELG EEEECCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC LEIAPQPVSE CEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA