| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523622
Identifier: 222523622
GI number: 222523622
Start: 394909
End: 395316
Strand: Reverse
Name: 222523622
Synonym: Chy400_0328
Alternate gene names: NA
Gene position: 395316-394909 (Counterclockwise)
Preceding gene: 222523623
Following gene: 222523621
Centisome position: 7.5
GC content: 57.6
Gene sequence:
>408_bases ATGAGTGATTCTTCGTACATTCGTATTCTGCGTACCCGACTGCCTTACGTCCAGTTCGATACGCGACCCTGGACGCCACC GCTCAACGTGTTCGAGACCGACCGGGAGATGATTCTGGTCATTGAGCTGGCCGGGGTTGATCCGGCGACCTTACAGATCG AAGCCTATCCCGAACTGGTCAGGATCGCCGGTGCCCGGCAGCTCACGCTGCCGACCGGTCTGCGTCGTCTGCACCGGATG GAGATTGCGGCCGGTGTGTTTCAAATTGAGGTGCCATTTGAACGATTGATCGATCCCGAACAGACCAGTGCTCGCTCGGT GCATGGGTTGCTTGAGATTCGCCTGCCCTTTGCCGGACGTACACTACGCCAGGTCGTTATTCCAGTGCTGGAGGGAGAAC AATCGTGA
Upstream 100 bases:
>100_bases CTTGCTGGTGTTGGGTTGGCGGGTACGACAGGTCAAACGTCGTTATGAACTGTTCAAGCGCTCGTTTATCATCGAGGCGT AATAGAAAAGGACGTGAGCA
Downstream 100 bases:
>100_bases ATGATCCAAACCCAATGCAACGTCCGCCTATGCCGGAGATACCGGATGTCTTGCCGGTATTGCCGATTAACAACGCGATC CTGTTCCCCGGCATGTTTTT
Product: molecular chaperone (small heat shock protein)-like protein
Products: NA
Alternate protein names: Heat Shock Protein Hsp
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MSDSSYIRILRTRLPYVQFDTRPWTPPLNVFETDREMILVIELAGVDPATLQIEAYPELVRIAGARQLTLPTGLRRLHRM EIAAGVFQIEVPFERLIDPEQTSARSVHGLLEIRLPFAGRTLRQVVIPVLEGEQS
Sequences:
>Translated_135_residues MSDSSYIRILRTRLPYVQFDTRPWTPPLNVFETDREMILVIELAGVDPATLQIEAYPELVRIAGARQLTLPTGLRRLHRM EIAAGVFQIEVPFERLIDPEQTSARSVHGLLEIRLPFAGRTLRQVVIPVLEGEQS >Mature_134_residues SDSSYIRILRTRLPYVQFDTRPWTPPLNVFETDREMILVIELAGVDPATLQIEAYPELVRIAGARQLTLPTGLRRLHRME IAAGVFQIEVPFERLIDPEQTSARSVHGLLEIRLPFAGRTLRQVVIPVLEGEQS
Specific function: Unknown
COG id: COG0071
COG function: function code O; Molecular chaperone (small heat shock protein)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15375; Mature: 15244
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: PS01031 HSP20
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSSYIRILRTRLPYVQFDTRPWTPPLNVFETDREMILVIELAGVDPATLQIEAYPELV CCCCHHHHHHHHHCCEEEECCCCCCCCCCEEECCCEEEEEEEECCCCCEEEEEECCHHHH RIAGARQLTLPTGLRRLHRMEIAAGVFQIEVPFERLIDPEQTSARSVHGLLEIRLPFAGR HHCCCCEEECHHHHHHHHHHHHHCCEEEEEECHHHCCCCCCCCHHHHEEEEEEEECCCCH TLRQVVIPVLEGEQS HHHHHHHHHCCCCCC >Mature Secondary Structure SDSSYIRILRTRLPYVQFDTRPWTPPLNVFETDREMILVIELAGVDPATLQIEAYPELV CCCHHHHHHHHHCCEEEECCCCCCCCCCEEECCCEEEEEEEECCCCCEEEEEECCHHHH RIAGARQLTLPTGLRRLHRMEIAAGVFQIEVPFERLIDPEQTSARSVHGLLEIRLPFAGR HHCCCCEEECHHHHHHHHHHHHHCCEEEEEECHHHCCCCCCCCHHHHEEEEEEEECCCCH TLRQVVIPVLEGEQS HHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA