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The map label for this gene is uvsE [H]

Identifier: 222523556

GI number: 222523556

Start: 314669

End: 315697

Strand: Direct

Name: uvsE [H]

Synonym: Chy400_0262

Alternate gene names: 222523556

Gene position: 314669-315697 (Clockwise)

Preceding gene: 222523555

Following gene: 222523557

Centisome position: 5.97

GC content: 57.05

Gene sequence:

>1029_bases
ATGAAGGCAATAGATCATCCAATTCCTGGAACCAGCCACGACCTTGCACCGCTCTACCAGCGTGCATCCAGGCAATCAAA
GCATGCAGCAATCCGATCTTCCGGACAGCAATACGACACAACCCACCCTGGTATTCGGCTCGGTTTTGCCGTTCGCACTG
TGAGTCAACCCGGCCTGATCAGCGGCTCGCCACCTCATCTCAGCATCTTATTAACCCATTTAGGTGATGCCCTACGCTAC
CTTGAGCGGACTAACATCCGGTTTTACCGTTTTGCGTTACCCCGTCACTTCAATCTCAGCGATCTGGCTGAATGTCAGAC
ACAACTCGCGCTCCTCAATCAACACATCAGTACCCGCAACCTGCGCCTGGGCGTACACCTTGATCCGCACCTGAGCCTCA
GCCATTCCGATGAACAGGTTGCCGACGCGACGATCCGCACGATTGAGGCGACGTGTCAGCTTCTGGCAGCCCTTGATCAC
GCTCAGACCATCAATCACACCCTGGTGATACATCCCGGAGCTGCCGATCCTGCTGCACAACAACGCTTCATCCAGCGTTG
GGTAAAGCTATCGATTCAGGCTCGCCGGCGCACAACCATCGAGCACACCGGCGCCGGATTCTCGCTGGGGCAACTACTCG
TTTTAGCTGCACGTACCGGTATCCCCATCGTTTTCGATTATCTCCACTACCGATTACACAATCCTGAACGGTTGAGTCTG
GCGCTGGCACTAGGGCTGACCCTGGCCACCTGGCCGCACCAGATCCGCCCCGAAGTTCATCTGAGCAGTCAACGCAGCGA
AGCCCATCTGCTTCCGGGACGCAACGGTACTACCCGGGTCATACCACCACGCGCCGGTCAGCACGCCGATTTTGTAGTCG
CCCATGATGCAATTGCCCTGCTCGAAGCCGGTCGGGGTTTACCACCGTTCGATCTGATGATCGAAGCAAAAGCCGGCGAT
CTGGCACTTTTGCGTCTCCGCCAGGAACTGGCTCATTATGCACCCGAATGGGCTGCGCGGCTGGCGTGA

Upstream 100 bases:

>100_bases
CGAACATTTGTCCTACAATAAACAGGCATTCACCTGCACCATCACCGGCGAACGCCCTTGCAAACAAACGCTCACTATCC
AACGTGCTGCGGCTACTGTT

Downstream 100 bases:

>100_bases
GGATCTGTCACACAGCAAGGGTCTTATGTTCATATGTGATGTATGTACAGAACACGCTGGCCGGCCAGCGCTGTGGCAAA
GTCTACCTGAATCGCGACTG

Product: UV damage repair endonuclease-like protein

Products: NA

Alternate protein names: UV-endonuclease; UVED [H]

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MKAIDHPIPGTSHDLAPLYQRASRQSKHAAIRSSGQQYDTTHPGIRLGFAVRTVSQPGLISGSPPHLSILLTHLGDALRY
LERTNIRFYRFALPRHFNLSDLAECQTQLALLNQHISTRNLRLGVHLDPHLSLSHSDEQVADATIRTIEATCQLLAALDH
AQTINHTLVIHPGAADPAAQQRFIQRWVKLSIQARRRTTIEHTGAGFSLGQLLVLAARTGIPIVFDYLHYRLHNPERLSL
ALALGLTLATWPHQIRPEVHLSSQRSEAHLLPGRNGTTRVIPPRAGQHADFVVAHDAIALLEAGRGLPPFDLMIEAKAGD
LALLRLRQELAHYAPEWAARLA

Sequences:

>Translated_342_residues
MKAIDHPIPGTSHDLAPLYQRASRQSKHAAIRSSGQQYDTTHPGIRLGFAVRTVSQPGLISGSPPHLSILLTHLGDALRY
LERTNIRFYRFALPRHFNLSDLAECQTQLALLNQHISTRNLRLGVHLDPHLSLSHSDEQVADATIRTIEATCQLLAALDH
AQTINHTLVIHPGAADPAAQQRFIQRWVKLSIQARRRTTIEHTGAGFSLGQLLVLAARTGIPIVFDYLHYRLHNPERLSL
ALALGLTLATWPHQIRPEVHLSSQRSEAHLLPGRNGTTRVIPPRAGQHADFVVAHDAIALLEAGRGLPPFDLMIEAKAGD
LALLRLRQELAHYAPEWAARLA
>Mature_342_residues
MKAIDHPIPGTSHDLAPLYQRASRQSKHAAIRSSGQQYDTTHPGIRLGFAVRTVSQPGLISGSPPHLSILLTHLGDALRY
LERTNIRFYRFALPRHFNLSDLAECQTQLALLNQHISTRNLRLGVHLDPHLSLSHSDEQVADATIRTIEATCQLLAALDH
AQTINHTLVIHPGAADPAAQQRFIQRWVKLSIQARRRTTIEHTGAGFSLGQLLVLAARTGIPIVFDYLHYRLHNPERLSL
ALALGLTLATWPHQIRPEVHLSSQRSEAHLLPGRNGTTRVIPPRAGQHADFVVAHDAIALLEAGRGLPPFDLMIEAKAGD
LALLRLRQELAHYAPEWAARLA

Specific function: Component in a DNA repair pathway. Removal of UV-light damaged nucleotides. Recognizes pyrimidine dimers and cleave a phosphodiester bond immediately 5' to the lesion [H]

COG id: COG4294

COG function: function code L; UV damage repair endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the uve1/uvsE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004601
- InterPro:   IPR013022 [H]

Pfam domain/function: PF03851 UvdE [H]

EC number: NA

Molecular weight: Translated: 37870; Mature: 37870

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAIDHPIPGTSHDLAPLYQRASRQSKHAAIRSSGQQYDTTHPGIRLGFAVRTVSQPGLI
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCC
SGSPPHLSILLTHLGDALRYLERTNIRFYRFALPRHFNLSDLAECQTQLALLNQHISTRN
CCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCC
LRLGVHLDPHLSLSHSDEQVADATIRTIEATCQLLAALDHAQTINHTLVIHPGAADPAAQ
EEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHH
QRFIQRWVKLSIQARRRTTIEHTGAGFSLGQLLVLAARTGIPIVFDYLHYRLHNPERLSL
HHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHH
ALALGLTLATWPHQIRPEVHLSSQRSEAHLLPGRNGTTRVIPPRAGQHADFVVAHDAIAL
HHHHHHHHHCCCHHCCCCEEECCCCCCEEECCCCCCCEEEECCCCCCCCCEEEHHHHHHH
LEAGRGLPPFDLMIEAKAGDLALLRLRQELAHYAPEWAARLA
HHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCHHHHHHCC
>Mature Secondary Structure
MKAIDHPIPGTSHDLAPLYQRASRQSKHAAIRSSGQQYDTTHPGIRLGFAVRTVSQPGLI
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCC
SGSPPHLSILLTHLGDALRYLERTNIRFYRFALPRHFNLSDLAECQTQLALLNQHISTRN
CCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCC
LRLGVHLDPHLSLSHSDEQVADATIRTIEATCQLLAALDHAQTINHTLVIHPGAADPAAQ
EEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHH
QRFIQRWVKLSIQARRRTTIEHTGAGFSLGQLLVLAARTGIPIVFDYLHYRLHNPERLSL
HHHHHHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHH
ALALGLTLATWPHQIRPEVHLSSQRSEAHLLPGRNGTTRVIPPRAGQHADFVVAHDAIAL
HHHHHHHHHCCCHHCCCCEEECCCCCCEEECCCCCCCEEEECCCCCCCCCEEEHHHHHHH
LEAGRGLPPFDLMIEAKAGDLALLRLRQELAHYAPEWAARLA
HHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11792842 [H]