Definition Chloroflexus sp. Y-400-fl chromosome, complete genome.
Accession NC_012032
Length 5,268,950

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The map label for this gene is 222523555

Identifier: 222523555

GI number: 222523555

Start: 313035

End: 314288

Strand: Direct

Name: 222523555

Synonym: Chy400_0261

Alternate gene names: NA

Gene position: 313035-314288 (Clockwise)

Preceding gene: 222523554

Following gene: 222523556

Centisome position: 5.94

GC content: 56.54

Gene sequence:

>1254_bases
ATGACAGACGAGACCAGACGCGTTGCCGGTCGTCGCCATCTACGCTACGGTTTGGCTTTTGAACGCACCCAACATCCCGA
AGCAGCGGTTGATCAGTTTCGGCGCGCAATCGCTGCTGATCCGACCCTGCGCGATGCCCATAATGCGCTGGCTTTCCACT
ATCAGCAGCAGGGGCTGCTGGCGAAAGCTGCCGATGCCTTTGCGGCTGTCGCCAGCCTGGCCGACGACTATTTTGCCCAC
TTTAACCTCGGTTTTGTCCTGATTGAACTCGAGCGCTACGATGAGGCTGAACGCGAGTTTCGCCGTTGCCTTGAACTTGA
CCCTGGTGACGTAGCGGCACAACTCGAACTGGCCTACATCTACGCAGCCCGTGGTGACTACGAAACTGCCTTGAACTTCC
TGACAATCCCGCGTCAACACTATTACGACGACTGGGGCGTGTTTCACCTGCTTGGTCGCTGTCTCTTTCACATGCAACGC
TTCGACGAAGCACGTCAGGCCTGGCAACAGAGCCTGGCCCTGGCCCCAACCCCAGAAACGCAACTGGAATTGCTCTCCTG
TCTGCAAAGTATTGAACGACGACGTGAATTTCACGCCACCATCAGTCACAAAGACGAACTCTACATTCACGAGGGGGTTA
TCTGTCTCGGTTCAGCAATGGACGATGGGTTCACGATCCGACCGCTGAGCAATTACCGGTTCAGCGAACTCGATGTCGCC
CGTACCATACAGCGTTTTCTTGCCCTGGCCCGCAGCAGCGAATGGCGTTTCGGTGGGGTGACGACACCAGAGCTGATGAG
CAAGCCATTGGCGCTGACCCTGGCGCAATTACTCAATCTGCCATTGCTGAGCCTGCACCACTTACCGCAGCTCTCCGAGC
CAATCTTGATCGTGATGGCAGTCGGTCATTCCGCCGATCTGCTCACCATTGCCCGCGAACGCTTGCCCGTTCCTGGACCT
GGCTTCTGCCTGGCAGTTAACTGGACACGCCAAAGCAAATTGTTGCCGGAAATCATCGGGGTAATCGTCGAAGGTCAATG
CACCGTACCCTGGGAAGAGGAATTGCAAAGCCTTGATACAGCCGGTCAGACCGATCACATCAAACACATTGCCGGACGAC
TGATACAGATGGTACAAACGCTACCCGGCGAAGACAACCTGCCTCGCCAGATTCGATACTACACACGCCACCATCGGCGA
TTGGCAATCAATGCCCTGTTGCACACCTCGCCGCCCGACCACCCGGCTGAGTAG

Upstream 100 bases:

>100_bases
ATGAGCCAGGTACAATCCCCATAACCCGGATTGTACCCGATCAACCTGCGACGTCATGGCTCGCAACGGTCGCCCTCCAT
GCCGGGCGAGGAGGTTTATC

Downstream 100 bases:

>100_bases
GACACAATGATTGTTATATCAAGTTTAACGTAAGGCATCGGCACGCTATCTACCGTCACCCTCACGCTGTGCCTTGTGGA
CAAGCACCCCCTGGGAAGGC

Product: tetratricopeptide repeat-containing protein

Products: NA

Alternate protein names: Tetratricopeptide Repeat-Containing Protein

Number of amino acids: Translated: 417; Mature: 416

Protein sequence:

>417_residues
MTDETRRVAGRRHLRYGLAFERTQHPEAAVDQFRRAIAADPTLRDAHNALAFHYQQQGLLAKAADAFAAVASLADDYFAH
FNLGFVLIELERYDEAEREFRRCLELDPGDVAAQLELAYIYAARGDYETALNFLTIPRQHYYDDWGVFHLLGRCLFHMQR
FDEARQAWQQSLALAPTPETQLELLSCLQSIERRREFHATISHKDELYIHEGVICLGSAMDDGFTIRPLSNYRFSELDVA
RTIQRFLALARSSEWRFGGVTTPELMSKPLALTLAQLLNLPLLSLHHLPQLSEPILIVMAVGHSADLLTIARERLPVPGP
GFCLAVNWTRQSKLLPEIIGVIVEGQCTVPWEEELQSLDTAGQTDHIKHIAGRLIQMVQTLPGEDNLPRQIRYYTRHHRR
LAINALLHTSPPDHPAE

Sequences:

>Translated_417_residues
MTDETRRVAGRRHLRYGLAFERTQHPEAAVDQFRRAIAADPTLRDAHNALAFHYQQQGLLAKAADAFAAVASLADDYFAH
FNLGFVLIELERYDEAEREFRRCLELDPGDVAAQLELAYIYAARGDYETALNFLTIPRQHYYDDWGVFHLLGRCLFHMQR
FDEARQAWQQSLALAPTPETQLELLSCLQSIERRREFHATISHKDELYIHEGVICLGSAMDDGFTIRPLSNYRFSELDVA
RTIQRFLALARSSEWRFGGVTTPELMSKPLALTLAQLLNLPLLSLHHLPQLSEPILIVMAVGHSADLLTIARERLPVPGP
GFCLAVNWTRQSKLLPEIIGVIVEGQCTVPWEEELQSLDTAGQTDHIKHIAGRLIQMVQTLPGEDNLPRQIRYYTRHHRR
LAINALLHTSPPDHPAE
>Mature_416_residues
TDETRRVAGRRHLRYGLAFERTQHPEAAVDQFRRAIAADPTLRDAHNALAFHYQQQGLLAKAADAFAAVASLADDYFAHF
NLGFVLIELERYDEAEREFRRCLELDPGDVAAQLELAYIYAARGDYETALNFLTIPRQHYYDDWGVFHLLGRCLFHMQRF
DEARQAWQQSLALAPTPETQLELLSCLQSIERRREFHATISHKDELYIHEGVICLGSAMDDGFTIRPLSNYRFSELDVAR
TIQRFLALARSSEWRFGGVTTPELMSKPLALTLAQLLNLPLLSLHHLPQLSEPILIVMAVGHSADLLTIARERLPVPGPG
FCLAVNWTRQSKLLPEIIGVIVEGQCTVPWEEELQSLDTAGQTDHIKHIAGRLIQMVQTLPGEDNLPRQIRYYTRHHRRL
AINALLHTSPPDHPAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47447; Mature: 47315

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDETRRVAGRRHLRYGLAFERTQHPEAAVDQFRRAIAADPTLRDAHNALAFHYQQQGLL
CCCHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHH
AKAADAFAAVASLADDYFAHFNLGFVLIELERYDEAEREFRRCLELDPGDVAAQLELAYI
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHCCHHHHHHHHHHCCCCCCHHHHEEEEEE
YAARGDYETALNFLTIPRQHYYDDWGVFHLLGRCLFHMQRFDEARQAWQQSLALAPTPET
EEECCCHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
QLELLSCLQSIERRREFHATISHKDELYIHEGVICLGSAMDDGFTIRPLSNYRFSELDVA
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEECCCCCCEEEEECCCCCCHHHHHH
RTIQRFLALARSSEWRFGGVTTPELMSKPLALTLAQLLNLPLLSLHHLPQLSEPILIVMA
HHHHHHHHHHHCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCHHHHHCCCCCCCCEEEEEE
VGHSADLLTIARERLPVPGPGFCLAVNWTRQSKLLPEIIGVIVEGQCTVPWEEELQSLDT
CCCCCHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHCEEECCCCCCCHHHHHHHHHC
AGQTDHIKHIAGRLIQMVQTLPGEDNLPRQIRYYTRHHRRLAINALLHTSPPDHPAE
CCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEEHHHEECCCCCCCCC
>Mature Secondary Structure 
TDETRRVAGRRHLRYGLAFERTQHPEAAVDQFRRAIAADPTLRDAHNALAFHYQQQGLL
CCHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHH
AKAADAFAAVASLADDYFAHFNLGFVLIELERYDEAEREFRRCLELDPGDVAAQLELAYI
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHCCHHHHHHHHHHCCCCCCHHHHEEEEEE
YAARGDYETALNFLTIPRQHYYDDWGVFHLLGRCLFHMQRFDEARQAWQQSLALAPTPET
EEECCCHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
QLELLSCLQSIERRREFHATISHKDELYIHEGVICLGSAMDDGFTIRPLSNYRFSELDVA
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEECCCCCCEEEEECCCCCCHHHHHH
RTIQRFLALARSSEWRFGGVTTPELMSKPLALTLAQLLNLPLLSLHHLPQLSEPILIVMA
HHHHHHHHHHHCCCCCCCCCCCHHHHHCCHHHHHHHHHCCCHHHHHCCCCCCCCEEEEEE
VGHSADLLTIARERLPVPGPGFCLAVNWTRQSKLLPEIIGVIVEGQCTVPWEEELQSLDT
CCCCCHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHCEEECCCCCCCHHHHHHHHHC
AGQTDHIKHIAGRLIQMVQTLPGEDNLPRQIRYYTRHHRRLAINALLHTSPPDHPAE
CCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEEHHHEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA