| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523372
Identifier: 222523372
GI number: 222523372
Start: 79497
End: 81356
Strand: Reverse
Name: 222523372
Synonym: Chy400_0073
Alternate gene names: NA
Gene position: 81356-79497 (Counterclockwise)
Preceding gene: 222523373
Following gene: 222523371
Centisome position: 1.54
GC content: 53.12
Gene sequence:
>1860_bases ATGAATGCGTCAATCTATCGCAGTAAGTATTACGTTGAAAAGCGCACCGGTACCTTTGCCGATAACCTGGTTGCGTTTGG ATTGGCTTACGTTCTCGATGGGATTGCCGACAGCCGGGCACGGGTAACAATTGCAGACCACGGATCACATTTTGCAGTTA TCTGTGACCCACCCTTACGCGAAGATTGGGTAAAAAACTGCCAGTTTTTTACCGGCGCTTTTCTTTTAGTCACTGTTGAT CGCAAAACACAACAAAAGTTGATCAAAGGCACGCGCCTTGCCCTTGCCGATGTAGCGGCAATGGTGGGTGTGGTTGAAGA TTACGAACAGGCCAAAGCCGACAACGAAACCTACTGGACGTGGCGTAAAAGTGTTGGTGGTCAGCAGCCGCAGCTTCATC CGCCGGTTGAACCGCATCCCGACTGGGAACTCTTTCGGGCAATCAACCCGACAGCATTGCAGGCTGCCAATAGTGCTGCC GCAGAGTGGTTTCAGGGACGGGTTGCGTTTCCGGCTTTGCTGGAGACAGTGCTGATCTATGCCAGTACGTTGCCCAATGA TCAGGAAGGTGCTGAAAAGCATTGGGCTGCGGTTTGTAAGCAGCACGGGCTACACCATACAAAGCAGCTCAGTGCTTCAC AGGTGATCAATCCTACCCAGGGCAAAGGTACGGCCAACGGTAAGGCGATCTTCGCCAAACCGGGGAACCTGAGCAATTTC TGGCTCACCGAGTACCTGAAATGGGTTGGGTTGCGGTGGGCCGGATTTACCCGTCTGATCAGGGATAGCAAAGATCGCAA GATTTATGTGTTAGCGCCCAACCAACTGGACTGGCATGATCATCGCGGCATCCGCGAGGAATTTCGCCGTTTGATGGTCG GCTCAGGTGGCGCGATCCAACTCGATGTGCTGGCTGCGCTGCGTTATACCAGAGCAGTACTGGATTATGCCGCAGTTACG CAGAGTGAGCGCCTCCTTACCCAGATTTTTGGCAGTCATCAAGGCGTGAACAGGTTGGTCTACGGCCTCGATAGTGCCTA TTACAAGAACCTCGGCCAGTCGGCGGCAGTCATGAATATTGCCCGCATTGGCTTACCGGCCTGGGTGCAGCCACGTGTTC GGCAGGATATTCAGCTCTATCAGAACATGATCGATGAGCATATACGCATCGTTCGTAATCTCGATGAGAAGCGTGGCGAG GACTATGAATTGCTCCGTCTCTACCGCGATTTTCTTTCGACCAACGAATTGACGGCGCTGCTGGCATTTACCGATGCCTA CTCTGGCTTTGTGATCCAGCGCGACAAACTCGCGCCTCAGTTTACCGTTCATCATCTGGAGGTTATTATGAGTTCGATTG CGCCACCCCTAAGCAAGATTACCCAATCACGCGGCTTTCGCAACCTGGCCTATGCCATTCGCATGGCAACCGTCGAGGCT CATCGGCGCAACCTGAAGCGAAATCAAGGTCGCTACGATGTGTCGTATGAGGTGCGCTACGGGCTTGGTCAGGAATTGCT GCGCAAATCCGCCTATCCCAACGAGTTTATTACTGCCCTGAGCGAGTTTATTCACGATTACAATGCCGAAAACGCCCGGA TGCGTGAGCGGCTTGAACGCCAAGGGTATTCCCAGCCGCGCGGGGCGCGTAGTGATGTCTCGATCAAGGATATCGATGAA TTGCTGGCTCTGATGGATGAATATCGCGATCCACAGATGATTGCCAGCCTGCTGGTGGCGTATGGCTATGCCAGTACCTT CCAGCGTGATGAAACCTATACCCCCGATAGCGACGCTGAAGAGGTGACAGAGCCGGTCAGTAGTGATGGTGATGATGATA ATTCGCCTGAAGCAGAGTAG
Upstream 100 bases:
>100_bases GGATTGCCTACACATTACTGGCTCGTGCCTTACGACGGGCCGATCAGCGGGGCACGGAGATGGGCGCCGGGCAAACGCTT CCCTGAGCAGTGGAGTATCT
Downstream 100 bases:
>100_bases TCGTGCATATTTACGAATGGAGACATGTGTATGAAGCCAGTGTTTAGCCTGTCAATTGCTGCTCGCGCCGTCTTGAACCT GCACTCGTTGAACAACGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 619; Mature: 619
Protein sequence:
>619_residues MNASIYRSKYYVEKRTGTFADNLVAFGLAYVLDGIADSRARVTIADHGSHFAVICDPPLREDWVKNCQFFTGAFLLVTVD RKTQQKLIKGTRLALADVAAMVGVVEDYEQAKADNETYWTWRKSVGGQQPQLHPPVEPHPDWELFRAINPTALQAANSAA AEWFQGRVAFPALLETVLIYASTLPNDQEGAEKHWAAVCKQHGLHHTKQLSASQVINPTQGKGTANGKAIFAKPGNLSNF WLTEYLKWVGLRWAGFTRLIRDSKDRKIYVLAPNQLDWHDHRGIREEFRRLMVGSGGAIQLDVLAALRYTRAVLDYAAVT QSERLLTQIFGSHQGVNRLVYGLDSAYYKNLGQSAAVMNIARIGLPAWVQPRVRQDIQLYQNMIDEHIRIVRNLDEKRGE DYELLRLYRDFLSTNELTALLAFTDAYSGFVIQRDKLAPQFTVHHLEVIMSSIAPPLSKITQSRGFRNLAYAIRMATVEA HRRNLKRNQGRYDVSYEVRYGLGQELLRKSAYPNEFITALSEFIHDYNAENARMRERLERQGYSQPRGARSDVSIKDIDE LLALMDEYRDPQMIASLLVAYGYASTFQRDETYTPDSDAEEVTEPVSSDGDDDNSPEAE
Sequences:
>Translated_619_residues MNASIYRSKYYVEKRTGTFADNLVAFGLAYVLDGIADSRARVTIADHGSHFAVICDPPLREDWVKNCQFFTGAFLLVTVD RKTQQKLIKGTRLALADVAAMVGVVEDYEQAKADNETYWTWRKSVGGQQPQLHPPVEPHPDWELFRAINPTALQAANSAA AEWFQGRVAFPALLETVLIYASTLPNDQEGAEKHWAAVCKQHGLHHTKQLSASQVINPTQGKGTANGKAIFAKPGNLSNF WLTEYLKWVGLRWAGFTRLIRDSKDRKIYVLAPNQLDWHDHRGIREEFRRLMVGSGGAIQLDVLAALRYTRAVLDYAAVT QSERLLTQIFGSHQGVNRLVYGLDSAYYKNLGQSAAVMNIARIGLPAWVQPRVRQDIQLYQNMIDEHIRIVRNLDEKRGE DYELLRLYRDFLSTNELTALLAFTDAYSGFVIQRDKLAPQFTVHHLEVIMSSIAPPLSKITQSRGFRNLAYAIRMATVEA HRRNLKRNQGRYDVSYEVRYGLGQELLRKSAYPNEFITALSEFIHDYNAENARMRERLERQGYSQPRGARSDVSIKDIDE LLALMDEYRDPQMIASLLVAYGYASTFQRDETYTPDSDAEEVTEPVSSDGDDDNSPEAE >Mature_619_residues MNASIYRSKYYVEKRTGTFADNLVAFGLAYVLDGIADSRARVTIADHGSHFAVICDPPLREDWVKNCQFFTGAFLLVTVD RKTQQKLIKGTRLALADVAAMVGVVEDYEQAKADNETYWTWRKSVGGQQPQLHPPVEPHPDWELFRAINPTALQAANSAA AEWFQGRVAFPALLETVLIYASTLPNDQEGAEKHWAAVCKQHGLHHTKQLSASQVINPTQGKGTANGKAIFAKPGNLSNF WLTEYLKWVGLRWAGFTRLIRDSKDRKIYVLAPNQLDWHDHRGIREEFRRLMVGSGGAIQLDVLAALRYTRAVLDYAAVT QSERLLTQIFGSHQGVNRLVYGLDSAYYKNLGQSAAVMNIARIGLPAWVQPRVRQDIQLYQNMIDEHIRIVRNLDEKRGE DYELLRLYRDFLSTNELTALLAFTDAYSGFVIQRDKLAPQFTVHHLEVIMSSIAPPLSKITQSRGFRNLAYAIRMATVEA HRRNLKRNQGRYDVSYEVRYGLGQELLRKSAYPNEFITALSEFIHDYNAENARMRERLERQGYSQPRGARSDVSIKDIDE LLALMDEYRDPQMIASLLVAYGYASTFQRDETYTPDSDAEEVTEPVSSDGDDDNSPEAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70194; Mature: 70194
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: PS01048 RIBOSOMAL_S6
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNASIYRSKYYVEKRTGTFADNLVAFGLAYVLDGIADSRARVTIADHGSHFAVICDPPLR CCCCHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCH EDWVKNCQFFTGAFLLVTVDRKTQQKLIKGTRLALADVAAMVGVVEDYEQAKADNETYWT HHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE WRKSVGGQQPQLHPPVEPHPDWELFRAINPTALQAANSAAAEWFQGRVAFPALLETVLIY EHHHCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH ASTLPNDQEGAEKHWAAVCKQHGLHHTKQLSASQVINPTQGKGTANGKAIFAKPGNLSNF HHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCHH WLTEYLKWVGLRWAGFTRLIRDSKDRKIYVLAPNQLDWHDHRGIREEFRRLMVGSGGAIQ HHHHHHHHHCCHHHHHHHHHHCCCCCEEEEECCCCCCCHHCCCHHHHHHHHHCCCCCCEE LDVLAALRYTRAVLDYAAVTQSERLLTQIFGSHQGVNRLVYGLDSAYYKNLGQSAAVMNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHH ARIGLPAWVQPRVRQDIQLYQNMIDEHIRIVRNLDEKRGEDYELLRLYRDFLSTNELTAL HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHH LAFTDAYSGFVIQRDKLAPQFTVHHLEVIMSSIAPPLSKITQSRGFRNLAYAIRMATVEA HHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHH HRRNLKRNQGRYDVSYEVRYGLGQELLRKSAYPNEFITALSEFIHDYNAENARMRERLER HHHHHHHCCCCEEEEEEEHHCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH QGYSQPRGARSDVSIKDIDELLALMDEYRDPQMIASLLVAYGYASTFQRDETYTPDSDAE CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH EVTEPVSSDGDDDNSPEAE HHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MNASIYRSKYYVEKRTGTFADNLVAFGLAYVLDGIADSRARVTIADHGSHFAVICDPPLR CCCCHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCH EDWVKNCQFFTGAFLLVTVDRKTQQKLIKGTRLALADVAAMVGVVEDYEQAKADNETYWT HHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE WRKSVGGQQPQLHPPVEPHPDWELFRAINPTALQAANSAAAEWFQGRVAFPALLETVLIY EHHHCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH ASTLPNDQEGAEKHWAAVCKQHGLHHTKQLSASQVINPTQGKGTANGKAIFAKPGNLSNF HHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCHH WLTEYLKWVGLRWAGFTRLIRDSKDRKIYVLAPNQLDWHDHRGIREEFRRLMVGSGGAIQ HHHHHHHHHCCHHHHHHHHHHCCCCCEEEEECCCCCCCHHCCCHHHHHHHHHCCCCCCEE LDVLAALRYTRAVLDYAAVTQSERLLTQIFGSHQGVNRLVYGLDSAYYKNLGQSAAVMNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHH ARIGLPAWVQPRVRQDIQLYQNMIDEHIRIVRNLDEKRGEDYELLRLYRDFLSTNELTAL HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHH LAFTDAYSGFVIQRDKLAPQFTVHHLEVIMSSIAPPLSKITQSRGFRNLAYAIRMATVEA HHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHH HRRNLKRNQGRYDVSYEVRYGLGQELLRKSAYPNEFITALSEFIHDYNAENARMRERLER HHHHHHHCCCCEEEEEEEHHCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH QGYSQPRGARSDVSIKDIDELLALMDEYRDPQMIASLLVAYGYASTFQRDETYTPDSDAE CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH EVTEPVSSDGDDDNSPEAE HHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA