| Definition | Chloroflexus sp. Y-400-fl chromosome, complete genome. |
|---|---|
| Accession | NC_012032 |
| Length | 5,268,950 |
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The map label for this gene is 222523371
Identifier: 222523371
GI number: 222523371
Start: 78477
End: 79466
Strand: Reverse
Name: 222523371
Synonym: Chy400_0072
Alternate gene names: NA
Gene position: 79466-78477 (Counterclockwise)
Preceding gene: 222523372
Following gene: 222523370
Centisome position: 1.51
GC content: 54.55
Gene sequence:
>990_bases ATGAAGCCAGTGTTTAGCCTGTCAATTGCTGCTCGCGCCGTCTTGAACCTGCACTCGTTGAACAACGAAGGTGGTGAAGG GAATCAGATTCAAACGCGCATGGTCAATGTCTTCGCCGATGGTCGCCTGCACAGCGTGAATGCGATCAGTGGCGATATGT TCAAGCACATTCAGTCTGAACATTTGCACCGCCTGGCTGTGCAGGCAGACTTGCCTCTCTCAATGGGTGCACGGCTGTTT AATGCCAATCGGATCAACTATGATCTCGACCTCGATAAAGAGTTCCTCAATCAGTTGCAGACGGCCAAAAGCAATGCGGG TGAACTTGATCTTATTCTCCAGCGTTGTGCAGTGACCGATATGGCCGGCGCGCTGATCACCGCCGGGAATCGGTCGTTGC CGCGCAAAAGTGTGGTTGAGTTTGGGTGGGTGGTAGGCGTACCGGGCAGTGTCAAGACCGACTCCTACTTCCATGTCAAG TTTGAGAGCGAGCGCGGTGGGGGGAGTGCCGGAGTTGACGAGTCTGGTTCGATTGCCGGCAAACAGACGCCGTTCCATCG TCCGGCATCGTCGGGTGTCTATGCGATTGTTGTGCAGGTGGAAGCGGCGCGGATTGGCTTTAACGATATTTCCCAACGCT ATGCAGTGGATGCGGATCAGCGTCGGAAACGTCTACGTGCTTTGCTGGAAAGCATTCTCTACACCTTCATCGAACCTGCC GGAGCGATGCGCACGGCCCAAAATCCGCACATTCTCGATGTGAGTGGGGTGATGACGGTTAGCTCGAATGTCATCCCGGC TCCCTGTATCTCGCCACTGAAAGACGATTTTGTGAGCGATGTCCAGCGGGTTGCCGAGAGTCTGAATCAGCTTCACCCTG ATGCGATTGAGCTGTTTTCGTTCGACTCACTCGGTGCCTTTGCCGAACAGATGAGCCGACTTATCCAGGAGGCTGAACCG TTTACCTTGCCGGCGGTGAATGGAGCATAA
Upstream 100 bases:
>100_bases CGACGCTGAAGAGGTGACAGAGCCGGTCAGTAGTGATGGTGATGATGATAATTCGCCTGAAGCAGAGTAGTCGTGCATAT TTACGAATGGAGACATGTGT
Downstream 100 bases:
>100_bases TTATGTGGTTGATTGCTGAATACGAGGCAGTCTCACTCTTCTCGCTGCGTCCCAGTTTCACAACGGCATCCGGCGGGAAG ACATTGCTGGCACCGACCCC
Product: CRISPR-associated autoregulator, DevR family
Products: NA
Alternate protein names: CRISPR-Associated Autoregulator DevR Family Protein; Crispr-Associated Autoregulator Devr Family; CRISPR-Associated Protein; CRISPR-Associated Autoregulator DevR Family Protein Protein; Crispr-Associated Negative Autoregulator
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MKPVFSLSIAARAVLNLHSLNNEGGEGNQIQTRMVNVFADGRLHSVNAISGDMFKHIQSEHLHRLAVQADLPLSMGARLF NANRINYDLDLDKEFLNQLQTAKSNAGELDLILQRCAVTDMAGALITAGNRSLPRKSVVEFGWVVGVPGSVKTDSYFHVK FESERGGGSAGVDESGSIAGKQTPFHRPASSGVYAIVVQVEAARIGFNDISQRYAVDADQRRKRLRALLESILYTFIEPA GAMRTAQNPHILDVSGVMTVSSNVIPAPCISPLKDDFVSDVQRVAESLNQLHPDAIELFSFDSLGAFAEQMSRLIQEAEP FTLPAVNGA
Sequences:
>Translated_329_residues MKPVFSLSIAARAVLNLHSLNNEGGEGNQIQTRMVNVFADGRLHSVNAISGDMFKHIQSEHLHRLAVQADLPLSMGARLF NANRINYDLDLDKEFLNQLQTAKSNAGELDLILQRCAVTDMAGALITAGNRSLPRKSVVEFGWVVGVPGSVKTDSYFHVK FESERGGGSAGVDESGSIAGKQTPFHRPASSGVYAIVVQVEAARIGFNDISQRYAVDADQRRKRLRALLESILYTFIEPA GAMRTAQNPHILDVSGVMTVSSNVIPAPCISPLKDDFVSDVQRVAESLNQLHPDAIELFSFDSLGAFAEQMSRLIQEAEP FTLPAVNGA >Mature_329_residues MKPVFSLSIAARAVLNLHSLNNEGGEGNQIQTRMVNVFADGRLHSVNAISGDMFKHIQSEHLHRLAVQADLPLSMGARLF NANRINYDLDLDKEFLNQLQTAKSNAGELDLILQRCAVTDMAGALITAGNRSLPRKSVVEFGWVVGVPGSVKTDSYFHVK FESERGGGSAGVDESGSIAGKQTPFHRPASSGVYAIVVQVEAARIGFNDISQRYAVDADQRRKRLRALLESILYTFIEPA GAMRTAQNPHILDVSGVMTVSSNVIPAPCISPLKDDFVSDVQRVAESLNQLHPDAIELFSFDSLGAFAEQMSRLIQEAEP FTLPAVNGA
Specific function: Unknown
COG id: COG1857
COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35716; Mature: 35716
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPVFSLSIAARAVLNLHSLNNEGGEGNQIQTRMVNVFADGRLHSVNAISGDMFKHIQSE CCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEEEEEECCCEEECCCCCHHHHHHHHHH HLHRLAVQADLPLSMGARLFNANRINYDLDLDKEFLNQLQTAKSNAGELDLILQRCAVTD HHHHHHHHCCCCHHHCCCEECCCCEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH MAGALITAGNRSLPRKSVVEFGWVVGVPGSVKTDSYFHVKFESERGGGSAGVDESGSIAG HHHHEEECCCCCCCHHHHHHHHHEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC KQTPFHRPASSGVYAIVVQVEAARIGFNDISQRYAVDADQRRKRLRALLESILYTFIEPA CCCCCCCCCCCCEEEEEEEEEHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC GAMRTAQNPHILDVSGVMTVSSNVIPAPCISPLKDDFVSDVQRVAESLNQLHPDAIELFS HHHHCCCCCCEEEECCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHC FDSLGAFAEQMSRLIQEAEPFTLPAVNGA CCHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MKPVFSLSIAARAVLNLHSLNNEGGEGNQIQTRMVNVFADGRLHSVNAISGDMFKHIQSE CCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEEEEEECCCEEECCCCCHHHHHHHHHH HLHRLAVQADLPLSMGARLFNANRINYDLDLDKEFLNQLQTAKSNAGELDLILQRCAVTD HHHHHHHHCCCCHHHCCCEECCCCEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH MAGALITAGNRSLPRKSVVEFGWVVGVPGSVKTDSYFHVKFESERGGGSAGVDESGSIAG HHHHEEECCCCCCCHHHHHHHHHEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC KQTPFHRPASSGVYAIVVQVEAARIGFNDISQRYAVDADQRRKRLRALLESILYTFIEPA CCCCCCCCCCCCEEEEEEEEEHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC GAMRTAQNPHILDVSGVMTVSSNVIPAPCISPLKDDFVSDVQRVAESLNQLHPDAIELFS HHHHCCCCCCEEEECCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHC FDSLGAFAEQMSRLIQEAEPFTLPAVNGA CCHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA