Click here to switch to the map view.

The map label for this gene is 222109204

Identifier: 222109204

GI number: 222109204

Start: 92048

End: 92989

Strand: Reverse

Name: 222109204

Synonym: Avi_9632

Alternate gene names: NA

Gene position: 92989-92048 (Counterclockwise)

Preceding gene: 222109205

Following gene: 222109203

Centisome position: 71.29

GC content: 53.4

Gene sequence:

>942_bases
CTGGACACCCACGAACTAACACATAAGGAGTTTCCGCTTCCGAACTTCGGACTGAGGCTTCACAGCCTCACGAAGGAACT
GGAAAACGGGCTTGGCTTTCGTCTCATTAAAGGCCTCCCAATCAACGACAAAGATGAAGCTGGCGCTAGGCTCATCTCGT
GGGGTCTCGGCCTTTATATAGGAGTAGCCTTACCGCAAAATTCTGATGGCGCGCTGATCCATGACGTACGTGATCGCGGA
GAAACCAGTGCGGCGACATTGCGCGGCAATGGCACCTCTGAAGAAATCCAATTTCACATTGATCCGTGTGACGTGGTTGC
TCTTTTCTGCAGGCGATCTGCCGCCGTGGGCGGACAGAGCAGGTTGTGTAGCTCGATCGAAATTCACAATCGATTGGCAA
TGGAGGACCCAGATTTGTTGGAGGTGCTCTATTCAATGCTTCCGTTCGCTTCTTTAGGCAGTGCCCCCCCAGACGCGCAT
GTCTATAACACTCCGGTTTTTGGATGGAAGAATGGGCTTTTTACGAGCCACTTTTATCGCGCTCGCATCATCCATGCCGG
ATCACTCCCGTCGGTGAATCTCTCTCCCGAACAGAGACGAGCAGTCGATCGCGTCAGTGAGATTGCGTCCAATCCGGATA
TGTACCTCGAGATGAACCTTGAGCCAGGGGACCTACAGCTGGTAAACAACCACATCCTCTACCACGCCCGGTCGTCATAT
GAGGACTACCCCGACCCTGACCTGCGCCGACACCTTTTTCGCCTTTGGTTCTCTGTACCCGACAGTCGCGAACTCCCCGA
TGAGTTCGCAGGTTTTTGGGGAACGACCGAGGCGGGAAGCGTCCGGGGAGGCGTCAGATCTTGGCAGGATAAATATCAAC
ATGTGAGTCGATACCAGAAGGCGATTGCCGAATACCATGGTATGGCAGTAGCAAAAAGCTAA

Upstream 100 bases:

>100_bases
GCGAGCTGACACCCGAGATCCCTCAGCTTGGACATACACCATATCCAATGCGGAACGGGAAGAGATTGAAGTTGCATTCG
CACAAGCTAGTGAAAGCGGT

Downstream 100 bases:

>100_bases
GCGAAAACCTACACCAACCCTAAATGTGAAACGCCGAGAACGCTGCTCTTTTGAGTGGTGTGCGGGGAGTATACACGTGT
CTCAACCCCACCATCTTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Taurine Catabolism Dioxygenase TauD/TfdA; Taurine Catabolism Dioxygenase Taud/Tfda; Clavaminic Acid Synthetase; Gamma-Butyrobetaine Dioxygenase

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MDTHELTHKEFPLPNFGLRLHSLTKELENGLGFRLIKGLPINDKDEAGARLISWGLGLYIGVALPQNSDGALIHDVRDRG
ETSAATLRGNGTSEEIQFHIDPCDVVALFCRRSAAVGGQSRLCSSIEIHNRLAMEDPDLLEVLYSMLPFASLGSAPPDAH
VYNTPVFGWKNGLFTSHFYRARIIHAGSLPSVNLSPEQRRAVDRVSEIASNPDMYLEMNLEPGDLQLVNNHILYHARSSY
EDYPDPDLRRHLFRLWFSVPDSRELPDEFAGFWGTTEAGSVRGGVRSWQDKYQHVSRYQKAIAEYHGMAVAKS

Sequences:

>Translated_313_residues
MDTHELTHKEFPLPNFGLRLHSLTKELENGLGFRLIKGLPINDKDEAGARLISWGLGLYIGVALPQNSDGALIHDVRDRG
ETSAATLRGNGTSEEIQFHIDPCDVVALFCRRSAAVGGQSRLCSSIEIHNRLAMEDPDLLEVLYSMLPFASLGSAPPDAH
VYNTPVFGWKNGLFTSHFYRARIIHAGSLPSVNLSPEQRRAVDRVSEIASNPDMYLEMNLEPGDLQLVNNHILYHARSSY
EDYPDPDLRRHLFRLWFSVPDSRELPDEFAGFWGTTEAGSVRGGVRSWQDKYQHVSRYQKAIAEYHGMAVAKS
>Mature_313_residues
MDTHELTHKEFPLPNFGLRLHSLTKELENGLGFRLIKGLPINDKDEAGARLISWGLGLYIGVALPQNSDGALIHDVRDRG
ETSAATLRGNGTSEEIQFHIDPCDVVALFCRRSAAVGGQSRLCSSIEIHNRLAMEDPDLLEVLYSMLPFASLGSAPPDAH
VYNTPVFGWKNGLFTSHFYRARIIHAGSLPSVNLSPEQRRAVDRVSEIASNPDMYLEMNLEPGDLQLVNNHILYHARSSY
EDYPDPDLRRHLFRLWFSVPDSRELPDEFAGFWGTTEAGSVRGGVRSWQDKYQHVSRYQKAIAEYHGMAVAKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35070; Mature: 35070

Theoretical pI: Translated: 6.27; Mature: 6.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTHELTHKEFPLPNFGLRLHSLTKELENGLGFRLIKGLPINDKDEAGARLISWGLGLYI
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHEEE
GVALPQNSDGALIHDVRDRGETSAATLRGNGTSEEIQFHIDPCDVVALFCRRSAAVGGQS
EEECCCCCCCCEEEHHHHCCCCCEEEEECCCCCCEEEEEECHHHHHHHHHHHHHCCCCHH
RLCSSIEIHNRLAMEDPDLLEVLYSMLPFASLGSAPPDAHVYNTPVFGWKNGLFTSHFYR
HHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHCCCCCCCCCEECCCCCCCCCCCCHHHHHE
ARIIHAGSLPSVNLSPEQRRAVDRVSEIASNPDMYLEMNLEPGDLQLVNNHILYHARSSY
EEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEECCEEEEEECCCC
EDYPDPDLRRHLFRLWFSVPDSRELPDEFAGFWGTTEAGSVRGGVRSWQDKYQHVSRYQK
CCCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
AIAEYHGMAVAKS
HHHHHHCCCEECC
>Mature Secondary Structure
MDTHELTHKEFPLPNFGLRLHSLTKELENGLGFRLIKGLPINDKDEAGARLISWGLGLYI
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHEEE
GVALPQNSDGALIHDVRDRGETSAATLRGNGTSEEIQFHIDPCDVVALFCRRSAAVGGQS
EEECCCCCCCCEEEHHHHCCCCCEEEEECCCCCCEEEEEECHHHHHHHHHHHHHCCCCHH
RLCSSIEIHNRLAMEDPDLLEVLYSMLPFASLGSAPPDAHVYNTPVFGWKNGLFTSHFYR
HHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHCCCCCCCCCEECCCCCCCCCCCCHHHHHE
ARIIHAGSLPSVNLSPEQRRAVDRVSEIASNPDMYLEMNLEPGDLQLVNNHILYHARSSY
EEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEECCEEEEEECCCC
EDYPDPDLRRHLFRLWFSVPDSRELPDEFAGFWGTTEAGSVRGGVRSWQDKYQHVSRYQK
CCCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
AIAEYHGMAVAKS
HHHHHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA