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The map label for this gene is istB [C]

Identifier: 222109195

GI number: 222109195

Start: 82904

End: 83491

Strand: Reverse

Name: istB [C]

Synonym: Avi_9616

Alternate gene names: 222109195

Gene position: 83491-82904 (Counterclockwise)

Preceding gene: 222109196

Following gene: 222109193

Centisome position: 64.01

GC content: 60.37

Gene sequence:

>588_bases
CTGGCGCAGCTTGGCTTCGTCGATCGACACGAGGCCGTGCATTTCCTCGGCCCACCTGGAACCGGCAAGAGTCATCTTGC
CACGGCGCTCGGCGTCGAAGCCGTCAAAGCTGGAAAGAGCGTCTACTTCACGAACCTTGCCGACCTCATCGGTTCGCTGG
CCCGTTCCGAACGGGAGGGTCGGCTTCAGGAGCGCATTCGCTTCTTTTGCAGGCCAAGCCTGCTCATCGTTGACGAGATC
GGATATTTGCCGGTCGTCCAGGGTGGCGGCAATCTGTTCTTCCAACTCGTGAACGCCCGATATGAACGAGGTGCGATGAT
CTTGACATCAAACCGCGGCTTCGCTGAATGGGGCGATGTCTTCGGGGACCCGGTTGTCGCCACCGCGCTTCTCGACAGAC
TGCTGCATCACGCCGTCGTCGTGCAAATCGAGGGATCGAGTTACCGATTGCGCCAGCATGCCGAACTGATGCCGGAGCAT
GTTCGCTCCAAAGCCCTCATTGCTCCGCCCGCATTCGCTCCACCTCAAAAGCCACGCGGGCGCGCGCCGAAAAATCCCCA
ATCCTCCCTGGCATCCACGTCGGCATAA

Upstream 100 bases:

>100_bases
AAAACGGCGTTGCGGATGGGCAAAGCTCGCGACGATCAAGACACTCGCTGGCTTCGACTTCACTTTCCAGCCTTCGCTCG
ATCGCGATCGCATCGTCACT

Downstream 100 bases:

>100_bases
GTGGGGAATTCTACTTCGGCACAATCGGGGGAAATTCACGCGGCATTGACAGCTCGCTTGCCCGCAGGCTTTTTTTATGG
CTGATTCCGAGCCGATGCAG

Product: IS21 family transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MAQLGFVDRHEAVHFLGPPGTGKSHLATALGVEAVKAGKSVYFTNLADLIGSLARSEREGRLQERIRFFCRPSLLIVDEI
GYLPVVQGGGNLFFQLVNARYERGAMILTSNRGFAEWGDVFGDPVVATALLDRLLHHAVVVQIEGSSYRLRQHAELMPEH
VRSKALIAPPAFAPPQKPRGRAPKNPQSSLASTSA

Sequences:

>Translated_195_residues
MAQLGFVDRHEAVHFLGPPGTGKSHLATALGVEAVKAGKSVYFTNLADLIGSLARSEREGRLQERIRFFCRPSLLIVDEI
GYLPVVQGGGNLFFQLVNARYERGAMILTSNRGFAEWGDVFGDPVVATALLDRLLHHAVVVQIEGSSYRLRQHAELMPEH
VRSKALIAPPAFAPPQKPRGRAPKNPQSSLASTSA
>Mature_194_residues
AQLGFVDRHEAVHFLGPPGTGKSHLATALGVEAVKAGKSVYFTNLADLIGSLARSEREGRLQERIRFFCRPSLLIVDEIG
YLPVVQGGGNLFFQLVNARYERGAMILTSNRGFAEWGDVFGDPVVATALLDRLLHHAVVVQIEGSSYRLRQHAELMPEHV
RSKALIAPPAFAPPQKPRGRAPKNPQSSLASTSA

Specific function: Unknown

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IS21/IS1162 putative ATP-binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR001270
- InterPro:   IPR002611 [H]

Pfam domain/function: PF01695 IstB [H]

EC number: NA

Molecular weight: Translated: 21220; Mature: 21088

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQLGFVDRHEAVHFLGPPGTGKSHLATALGVEAVKAGKSVYFTNLADLIGSLARSEREG
CCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHH
RLQERIRFFCRPSLLIVDEIGYLPVVQGGGNLFFQLVNARYERGAMILTSNRGFAEWGDV
HHHHHHHHHHCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHCCEEEEECCCCCHHHHHH
FGDPVVATALLDRLLHHAVVVQIEGSSYRLRQHAELMPEHVRSKALIAPPAFAPPQKPRG
CCCHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCC
RAPKNPQSSLASTSA
CCCCCCHHHHHCCCC
>Mature Secondary Structure 
AQLGFVDRHEAVHFLGPPGTGKSHLATALGVEAVKAGKSVYFTNLADLIGSLARSEREG
CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHH
RLQERIRFFCRPSLLIVDEIGYLPVVQGGGNLFFQLVNARYERGAMILTSNRGFAEWGDV
HHHHHHHHHHCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHCCEEEEECCCCCHHHHHH
FGDPVVATALLDRLLHHAVVVQIEGSSYRLRQHAELMPEHVRSKALIAPPAFAPPQKPRG
CCCHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCC
RAPKNPQSSLASTSA
CCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8382825 [H]