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The map label for this gene is ntaR [H]

Identifier: 222109193

GI number: 222109193

Start: 81422

End: 82090

Strand: Reverse

Name: ntaR [H]

Synonym: Avi_9612

Alternate gene names: 222109193

Gene position: 82090-81422 (Counterclockwise)

Preceding gene: 222109195

Following gene: 222109192

Centisome position: 62.94

GC content: 50.22

Gene sequence:

>669_bases
GTGACGCGCCAAACCTGCAATGATTCCACGACCAGCTATGCGATCTATGACCGGCTGAAGAACAAGGTGATGTCGTATGA
GTTTTCGCCGTCACAGCAGCTTCAACCGTGGACTTTGGCTGATGAATTCAAAGTTAGCTCGACTCCCGTCCGCGAAGCGC
TGATAAGGTTAGGCGCCGAAGGTTTGGTTGCGGTGATGCCCAACAAAGGCTTTTTTATGAAGCCTTTAAACCCTTCCGAG
ATATGCAGCCTTTATGTATTGCGTTCGCAACTGCTGCGGTACTCTTTACGGTATTTGCTGGAGCAAAGCCGCTTCTCTGA
CCACCGTTCTTTTGTAACCGTGTGGGAAGAGCGACTTTCAGATCTTTCGGCCAGTAGTTGCGCGTTGATTGAAGAGTTCT
TCATGGATTGGGTGGACGTTTCGAGGGCTCAAGCTTGTGTTGATACTCTTCAAAACACAAACGAACGCACCCGATTTATT
CGCTGTTTGTTCACCGAAGAACCAGCCCGGTCACGGCGGTACTTGGGCATCCTACGGGACTTGGTCCGGCATATCAAAAG
AAGTAACGCAGATGATGCAATTGATTGCCTGATAACGGAATTGGACTTCAAGGTCACCTCGGTTCCCGCGCTTTGCAACG
AAGGCTTGGTGCGGAGCTTCAGAAACTGA

Upstream 100 bases:

>100_bases
GTCCTTCTCTGATGTTAAAAAAAAATTGCAATCGCTAAGGGAAACCGCTTTGTTCCAATGAGCCGCCTTATCACGGATTT
TCTACCGCGAGGATATCAAC

Downstream 100 bases:

>100_bases
GGTTTAGTTGTCGAATAAGCCGCTGCGAGGGGCTGGAAAGGATAGCTTTATGGAAGTCGCAGAAGGAGAATTCAAACCTG
CCTTTCCTATCAAGCCTGCC

Product: transcriptional regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MTRQTCNDSTTSYAIYDRLKNKVMSYEFSPSQQLQPWTLADEFKVSSTPVREALIRLGAEGLVAVMPNKGFFMKPLNPSE
ICSLYVLRSQLLRYSLRYLLEQSRFSDHRSFVTVWEERLSDLSASSCALIEEFFMDWVDVSRAQACVDTLQNTNERTRFI
RCLFTEEPARSRRYLGILRDLVRHIKRSNADDAIDCLITELDFKVTSVPALCNEGLVRSFRN

Sequences:

>Translated_222_residues
MTRQTCNDSTTSYAIYDRLKNKVMSYEFSPSQQLQPWTLADEFKVSSTPVREALIRLGAEGLVAVMPNKGFFMKPLNPSE
ICSLYVLRSQLLRYSLRYLLEQSRFSDHRSFVTVWEERLSDLSASSCALIEEFFMDWVDVSRAQACVDTLQNTNERTRFI
RCLFTEEPARSRRYLGILRDLVRHIKRSNADDAIDCLITELDFKVTSVPALCNEGLVRSFRN
>Mature_221_residues
TRQTCNDSTTSYAIYDRLKNKVMSYEFSPSQQLQPWTLADEFKVSSTPVREALIRLGAEGLVAVMPNKGFFMKPLNPSEI
CSLYVLRSQLLRYSLRYLLEQSRFSDHRSFVTVWEERLSDLSASSCALIEEFFMDWVDVSRAQACVDTLQNTNERTRFIR
CLFTEEPARSRRYLGILRDLVRHIKRSNADDAIDCLITELDFKVTSVPALCNEGLVRSFRN

Specific function: Probable regulator for the expression of the NTA monooxygenase subunits [H]

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 25707; Mature: 25575

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRQTCNDSTTSYAIYDRLKNKVMSYEFSPSQQLQPWTLADEFKVSSTPVREALIRLGAE
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
GLVAVMPNKGFFMKPLNPSEICSLYVLRSQLLRYSLRYLLEQSRFSDHRSFVTVWEERLS
CEEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLSASSCALIEEFFMDWVDVSRAQACVDTLQNTNERTRFIRCLFTEEPARSRRYLGILRD
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHH
LVRHIKRSNADDAIDCLITELDFKVTSVPALCNEGLVRSFRN
HHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TRQTCNDSTTSYAIYDRLKNKVMSYEFSPSQQLQPWTLADEFKVSSTPVREALIRLGAE
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
GLVAVMPNKGFFMKPLNPSEICSLYVLRSQLLRYSLRYLLEQSRFSDHRSFVTVWEERLS
CEEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLSASSCALIEEFFMDWVDVSRAQACVDTLQNTNERTRFIRCLFTEEPARSRRYLGILRD
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHH
LVRHIKRSNADDAIDCLITELDFKVTSVPALCNEGLVRSFRN
HHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA