Definition | Agrobacterium vitis S4 plasmid pAtS4b, complete sequence. |
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Accession | NC_011991 |
Length | 130,435 |
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The map label for this gene is hisC [H]
Identifier: 222109188
GI number: 222109188
Start: 75240
End: 76346
Strand: Reverse
Name: hisC [H]
Synonym: Avi_9607
Alternate gene names: 222109188
Gene position: 76346-75240 (Counterclockwise)
Preceding gene: 222109189
Following gene: 222109187
Centisome position: 58.53
GC content: 50.59
Gene sequence:
>1107_bases ATGAGCAATTCATGCCAACTCGTTTTTCCATCTCACATTGAAAGGTTGCCGCGTTATAGGCCAGCAGCAGATTTAGCTGT AGTCTCCGAGACCTCAGCTGAACCTTTGGTCAACCTGGCATCAAACGAAAATCCTTATGGTACGAACCCGGGGTTTGCTG ATGCCTTAAATGAAATCACGCGTTTTAACCTCGCGGAGTACCCTGACCCCGATGCGCTCCGTCTGAAGACCGCTATCGCG GCGAAAAACCATGTTTCGATCGATCAGCTAATTATCGCGAACGGCTCCGATGAACTAATTGACTTGTCAGCTCGGACGCT GCTGGCGCCAGGAACGAACGCGATCTTCGATGAGTATTCCTTTGTAGCCTATCGTAAGGCGACTTACCTCGCAGGAGCTA CCGGTGTCAGTGTCCGACCTTCAGGCTGGAATGCAGATCTCAATGAGATGCTTCGTGTCATTGACACCAATACTCGGATG ATATTTTTAGCAAATCCGAGCAATCCGACTCCAGGTTTTATTTCAACGGCAGAATTTGACAGCTTCATCAGCAGGGTTCC TGCTACCGTCCTTGTAGTGCTCGATGAAGCCTATATCGATTTTGTTGAGCCGAACGAGCGGATCGATTGTAAGCTGCTGC TCCAATCAAGAAGCAATGTCTTTATAACGCGCACCTTCTCCAAGGCATACGGACTTGCAGGTGTGCGGGTCGGCTATGGC ATCGGTTCGCCGACACTTATTAACATGATGAACAGGATCAGGCAGCCCTTCTCCGTTGGCGTGTTGCCACAACTGGCCGC GGTAAACGCGCTGGCCAATGAAGGCTTCGTGAACGAAACTAGAGCAAAAAACATCGAGCAGAAGGCCAGACTATCAGAAG GATTGAGCGACCTTGGAATTGAGCACGCGGCATCCAAAGGAAATTTCATCATTGTAAAGTTGCGTGCTCCATCAGCAGCG CACGAGGCGCTGCAGGCGAAGCGAATCCTTGTGCGCCGCTTGGCTTCCTATGGCCTGAGCGACTGGCTGCGTTTGACAAT TGGCACAGAATCTCAAAACCGGATTGTACTTGACGCATTTCGAACCCTGACACAACAAGCAAACTGA
Upstream 100 bases:
>100_bases CCGCCGCCGCGAAGGATCACCTTAGGATCTCTCGATGAACAAACCTCACGTTAGCACTGATCACACGACGTTTCATATCA CATGAGGGTTAGGGTTTGAT
Downstream 100 bases:
>100_bases GAGTCATGGTTGTGACTGCTACTATGCGTCTGAGTATCTAGAAGTGAGGGTCCCTCGTGAAAAGACTATTTTGGCTCCAC ATCAAAAAGAGCGGAGGAAT
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase 2 [H]
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MSNSCQLVFPSHIERLPRYRPAADLAVVSETSAEPLVNLASNENPYGTNPGFADALNEITRFNLAEYPDPDALRLKTAIA AKNHVSIDQLIIANGSDELIDLSARTLLAPGTNAIFDEYSFVAYRKATYLAGATGVSVRPSGWNADLNEMLRVIDTNTRM IFLANPSNPTPGFISTAEFDSFISRVPATVLVVLDEAYIDFVEPNERIDCKLLLQSRSNVFITRTFSKAYGLAGVRVGYG IGSPTLINMMNRIRQPFSVGVLPQLAAVNALANEGFVNETRAKNIEQKARLSEGLSDLGIEHAASKGNFIIVKLRAPSAA HEALQAKRILVRRLASYGLSDWLRLTIGTESQNRIVLDAFRTLTQQAN
Sequences:
>Translated_368_residues MSNSCQLVFPSHIERLPRYRPAADLAVVSETSAEPLVNLASNENPYGTNPGFADALNEITRFNLAEYPDPDALRLKTAIA AKNHVSIDQLIIANGSDELIDLSARTLLAPGTNAIFDEYSFVAYRKATYLAGATGVSVRPSGWNADLNEMLRVIDTNTRM IFLANPSNPTPGFISTAEFDSFISRVPATVLVVLDEAYIDFVEPNERIDCKLLLQSRSNVFITRTFSKAYGLAGVRVGYG IGSPTLINMMNRIRQPFSVGVLPQLAAVNALANEGFVNETRAKNIEQKARLSEGLSDLGIEHAASKGNFIIVKLRAPSAA HEALQAKRILVRRLASYGLSDWLRLTIGTESQNRIVLDAFRTLTQQAN >Mature_367_residues SNSCQLVFPSHIERLPRYRPAADLAVVSETSAEPLVNLASNENPYGTNPGFADALNEITRFNLAEYPDPDALRLKTAIAA KNHVSIDQLIIANGSDELIDLSARTLLAPGTNAIFDEYSFVAYRKATYLAGATGVSVRPSGWNADLNEMLRVIDTNTRMI FLANPSNPTPGFISTAEFDSFISRVPATVLVVLDEAYIDFVEPNERIDCKLLLQSRSNVFITRTFSKAYGLAGVRVGYGI GSPTLINMMNRIRQPFSVGVLPQLAAVNALANEGFVNETRAKNIEQKARLSEGLSDLGIEHAASKGNFIIVKLRAPSAAH EALQAKRILVRRLASYGLSDWLRLTIGTESQNRIVLDAFRTLTQQAN
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788332, Length=329, Percent_Identity=28.2674772036474, Blast_Score=118, Evalue=6e-28, Organism=Escherichia coli, GI1788722, Length=348, Percent_Identity=27.0114942528736, Blast_Score=69, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6322075, Length=365, Percent_Identity=27.3972602739726, Blast_Score=107, Evalue=3e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.9 [H]
Molecular weight: Translated: 40256; Mature: 40125
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSCQLVFPSHIERLPRYRPAADLAVVSETSAEPLVNLASNENPYGTNPGFADALNEIT CCCCCEEECHHHHHHCCCCCCCCCEEEEECCCCCHHHHHCCCCCCCCCCCCHHHHHHHHH RFNLAEYPDPDALRLKTAIAAKNHVSIDQLIIANGSDELIDLSARTLLAPGTNAIFDEYS HCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCEEEECCCEEECCCCCHHHHCHH FVAYRKATYLAGATGVSVRPSGWNADLNEMLRVIDTNTRMIFLANPSNPTPGFISTAEFD HHHHHHHHHEECCCCCEECCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCEEHHHHH SFISRVPATVLVVLDEAYIDFVEPNERIDCKLLLQSRSNVFITRTFSKAYGLAGVRVGYG HHHHHCCCEEEEEEEHHHHEECCCCCCCCEEEEEECCCCEEEEEEHHHHHCCCCEEEECC IGSPTLINMMNRIRQPFSVGVLPQLAAVNALANEGFVNETRAKNIEQKARLSEGLSDLGI CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHCH EHAASKGNFIIVKLRAPSAAHEALQAKRILVRRLASYGLSDWLRLTIGTESQNRIVLDAF HHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHH RTLTQQAN HHHHHCCC >Mature Secondary Structure SNSCQLVFPSHIERLPRYRPAADLAVVSETSAEPLVNLASNENPYGTNPGFADALNEIT CCCCEEECHHHHHHCCCCCCCCCEEEEECCCCCHHHHHCCCCCCCCCCCCHHHHHHHHH RFNLAEYPDPDALRLKTAIAAKNHVSIDQLIIANGSDELIDLSARTLLAPGTNAIFDEYS HCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCEEEECCCEEECCCCCHHHHCHH FVAYRKATYLAGATGVSVRPSGWNADLNEMLRVIDTNTRMIFLANPSNPTPGFISTAEFD HHHHHHHHHEECCCCCEECCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCEEHHHHH SFISRVPATVLVVLDEAYIDFVEPNERIDCKLLLQSRSNVFITRTFSKAYGLAGVRVGYG HHHHHCCCEEEEEEEHHHHEECCCCCCCCEEEEEECCCCEEEEEEHHHHHCCCCEEEECC IGSPTLINMMNRIRQPFSVGVLPQLAAVNALANEGFVNETRAKNIEQKARLSEGLSDLGI CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHCH EHAASKGNFIIVKLRAPSAAHEALQAKRILVRRLASYGLSDWLRLTIGTESQNRIVLDAF HHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHH RTLTQQAN HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA