Definition Agrobacterium vitis S4 plasmid pAtS4b, complete sequence.
Accession NC_011991
Length 130,435

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The map label for this gene is 222109187

Identifier: 222109187

GI number: 222109187

Start: 74455

End: 75141

Strand: Reverse

Name: 222109187

Synonym: Avi_9606

Alternate gene names: NA

Gene position: 75141-74455 (Counterclockwise)

Preceding gene: 222109188

Following gene: 222109185

Centisome position: 57.61

GC content: 48.18

Gene sequence:

>687_bases
ATGTCAACTAGACAGCTACTCCGGAACCACTACGTTCAGGTGGATAGGAGCAAAAAACCCTATTGTTTTTTACTCGCGAA
GGAGCCCGAATACAACGATATTCTAAATAACTATCGTATCCCCCTCGGCGAATATCAGTTCAAGCGCACACTATTCGCGC
GAGAATGGCTCTATAAGGACGTGTGGCATGAGATGGTGAGTTTTGCTTTTTGCCGAGAACCATTGTCTCGTTGCATCAGC
GCATTTTTCTACCTCTGGGAGGCTGAGGCGCAGAGGCGCGCTTGGTTACCGTCGTTCAACGGCGCACTTAACGCCCATGG
TTACGGGCTGGATTATTCCTTCGACCAATTTCTCGATGCAGTCGTAGCATGCAGAGATTCAGGTTCAAACTTCTCGCCAA
TGGGGCTCCATTTTTCGACCCACACCGCGACTATGTGGGATGACGTCACTGATAGTGGTGGCTCGATCTTGTTGTCGAAT
ATTTTTAGGCTTGAGGATCTCATTCATGGGATAAATCACGTTTTCTCCGTATGTGGAGTTCCTGACAAAGCCAAACCTTT
GCTGCGGGATATCAACACCAACGAAACGAAGCGGCCCTTCACGCCTAGCAGACACCATATTGCAAAGGTCGAAGACCTTT
ATGGCAAAGATTTTGAACTTTACGAGACTTATGGCCGCCTTTTCTAG

Upstream 100 bases:

>100_bases
GAGAGTCATGGTTGTGACTGCTACTATGCGTCTGAGTATCTAGAAGTGAGGGTCCCTCGTGAAAAGACTATTTTGGCTCC
ACATCAAAAAGAGCGGAGGA

Downstream 100 bases:

>100_bases
GCATTCAAATCATCACAAAGGGCAACCTTGTCGAGGGAAAATGAGAAGATTTGTCGCAGCTAAACTCCATGGGATTCACG
TCACCGACGCTAATCTCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MSTRQLLRNHYVQVDRSKKPYCFLLAKEPEYNDILNNYRIPLGEYQFKRTLFAREWLYKDVWHEMVSFAFCREPLSRCIS
AFFYLWEAEAQRRAWLPSFNGALNAHGYGLDYSFDQFLDAVVACRDSGSNFSPMGLHFSTHTATMWDDVTDSGGSILLSN
IFRLEDLIHGINHVFSVCGVPDKAKPLLRDINTNETKRPFTPSRHHIAKVEDLYGKDFELYETYGRLF

Sequences:

>Translated_228_residues
MSTRQLLRNHYVQVDRSKKPYCFLLAKEPEYNDILNNYRIPLGEYQFKRTLFAREWLYKDVWHEMVSFAFCREPLSRCIS
AFFYLWEAEAQRRAWLPSFNGALNAHGYGLDYSFDQFLDAVVACRDSGSNFSPMGLHFSTHTATMWDDVTDSGGSILLSN
IFRLEDLIHGINHVFSVCGVPDKAKPLLRDINTNETKRPFTPSRHHIAKVEDLYGKDFELYETYGRLF
>Mature_227_residues
STRQLLRNHYVQVDRSKKPYCFLLAKEPEYNDILNNYRIPLGEYQFKRTLFAREWLYKDVWHEMVSFAFCREPLSRCISA
FFYLWEAEAQRRAWLPSFNGALNAHGYGLDYSFDQFLDAVVACRDSGSNFSPMGLHFSTHTATMWDDVTDSGGSILLSNI
FRLEDLIHGINHVFSVCGVPDKAKPLLRDINTNETKRPFTPSRHHIAKVEDLYGKDFELYETYGRLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26645; Mature: 26514

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTRQLLRNHYVQVDRSKKPYCFLLAKEPEYNDILNNYRIPLGEYQFKRTLFAREWLYKD
CCHHHHHHHHCEEECCCCCCEEEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
VWHEMVSFAFCREPLSRCISAFFYLWEAEAQRRAWLPSFNGALNAHGYGLDYSFDQFLDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH
VVACRDSGSNFSPMGLHFSTHTATMWDDVTDSGGSILLSNIFRLEDLIHGINHVFSVCGV
HHHHHCCCCCCCCCCEEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDKAKPLLRDINTNETKRPFTPSRHHIAKVEDLYGKDFELYETYGRLF
CCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCC
>Mature Secondary Structure 
STRQLLRNHYVQVDRSKKPYCFLLAKEPEYNDILNNYRIPLGEYQFKRTLFAREWLYKD
CHHHHHHHHCEEECCCCCCEEEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
VWHEMVSFAFCREPLSRCISAFFYLWEAEAQRRAWLPSFNGALNAHGYGLDYSFDQFLDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH
VVACRDSGSNFSPMGLHFSTHTATMWDDVTDSGGSILLSNIFRLEDLIHGINHVFSVCGV
HHHHHCCCCCCCCCCEEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDKAKPLLRDINTNETKRPFTPSRHHIAKVEDLYGKDFELYETYGRLF
CCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA