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The map label for this gene is rdoA [H]

Identifier: 22127684

GI number: 22127684

Start: 4237034

End: 4238020

Strand: Reverse

Name: rdoA [H]

Synonym: y3813

Alternate gene names: 22127684

Gene position: 4238020-4237034 (Counterclockwise)

Preceding gene: 22127685

Following gene: 22127683

Centisome position: 92.12

GC content: 46.5

Gene sequence:

>987_bases
ATGAACAACTCTGCTTTTAATTTTCAGACCTTGTCTCCTGACCTGATTATGGATGCCCTTGAGGGGGCAGGATTACGGGT
AGATTCGGGGTTAACCGCGCTGAATAGTTACGAAAACCGTGTCTACCAGTTTATGGATGAAGAGAGTAAACGGTATGTGG
TGAAGTTTTATCGCCCCGAGCGTTGGAGTAGTGAACAAATTACAGAGGAGCACCAGTTTTCTCTGGATTTGGCGGAGTCA
GAAATTCCGGTGATTGCCCCATTGCGACTCAATGGCAAGACTTTGCATACTCACTGTGGATTTTTCTTCGCTGTTTTTCC
TAGCGTTGGTGGGCGTCAGTATGAAATTGATAATCTTGACCAATTGGAGTGGGTTGGGCGTTTTCTTGGCAGAATCCATC
AGGCCGCTCGTAATAGCCTTTTCGTTGCCCGCCCAACAATGGGTATAGAAGAGTATTTGACAGAGCCGCGTCAGCTACTC
GCCAATTGTGATTTAGTACCAGTAAAACAACGGGATAAATTTCTGGCAGCGGCAGATTTGCTCATTACAACGATTAAGCA
GTATTGGCATACAGAATGGCAGCCTTTACGGCTACATGGTGATTGCCATCCAGGAAATATTTTGTGGCGTGATGGTCCGA
TGTTCGTTGATTTAGATGATGCGAGGAATGGCCCGGCTATCCAAGATTTATGGATGCTATTACACGGTGATCGCCGTGAC
CAATCTATGCAGTTGGATATATTGCTGGAAGCTTATAGTGAGTTTGCTGATTTTGATCAGCGTGAATTAGCACTAATTGA
ACCCTTGCGCGCGATGCGGATGGTTTACTACCTTGCATGGGTCGCCAGACGTTGGCAAGACCCTGCATTTCCGAAAAGTT
TTCCGTGGATGGCTGAATCTGATTTTTGGCTCCAGCAGACAGCATCATTCACTGAGCAGGTTAAGCTGTTGCAGGAACCC
CCTTTGCAGCTGATGCCAATGTACTAA

Upstream 100 bases:

>100_bases
TAAAGATTAGTCATACTCCTGTCTGCGGAGATAGGGGCTTTAATGATATTATTTATTATTCTCAGCGCGCTGCTGTCACT
TATATAGACTAAATGTTGTT

Downstream 100 bases:

>100_bases
AGCTAAGATAATGGAGATTGTTATAGTATGAAAAATGTATGGTTAGCACTCGTTGGTATCGTGATGGCGTTCAGTGTGAC
GGCTGCACAATTCACCGATG

Product: serine/threonine protein kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MNNSAFNFQTLSPDLIMDALEGAGLRVDSGLTALNSYENRVYQFMDEESKRYVVKFYRPERWSSEQITEEHQFSLDLAES
EIPVIAPLRLNGKTLHTHCGFFFAVFPSVGGRQYEIDNLDQLEWVGRFLGRIHQAARNSLFVARPTMGIEEYLTEPRQLL
ANCDLVPVKQRDKFLAAADLLITTIKQYWHTEWQPLRLHGDCHPGNILWRDGPMFVDLDDARNGPAIQDLWMLLHGDRRD
QSMQLDILLEAYSEFADFDQRELALIEPLRAMRMVYYLAWVARRWQDPAFPKSFPWMAESDFWLQQTASFTEQVKLLQEP
PLQLMPMY

Sequences:

>Translated_328_residues
MNNSAFNFQTLSPDLIMDALEGAGLRVDSGLTALNSYENRVYQFMDEESKRYVVKFYRPERWSSEQITEEHQFSLDLAES
EIPVIAPLRLNGKTLHTHCGFFFAVFPSVGGRQYEIDNLDQLEWVGRFLGRIHQAARNSLFVARPTMGIEEYLTEPRQLL
ANCDLVPVKQRDKFLAAADLLITTIKQYWHTEWQPLRLHGDCHPGNILWRDGPMFVDLDDARNGPAIQDLWMLLHGDRRD
QSMQLDILLEAYSEFADFDQRELALIEPLRAMRMVYYLAWVARRWQDPAFPKSFPWMAESDFWLQQTASFTEQVKLLQEP
PLQLMPMY
>Mature_328_residues
MNNSAFNFQTLSPDLIMDALEGAGLRVDSGLTALNSYENRVYQFMDEESKRYVVKFYRPERWSSEQITEEHQFSLDLAES
EIPVIAPLRLNGKTLHTHCGFFFAVFPSVGGRQYEIDNLDQLEWVGRFLGRIHQAARNSLFVARPTMGIEEYLTEPRQLL
ANCDLVPVKQRDKFLAAADLLITTIKQYWHTEWQPLRLHGDCHPGNILWRDGPMFVDLDDARNGPAIQDLWMLLHGDRRD
QSMQLDILLEAYSEFADFDQRELALIEPLRAMRMVYYLAWVARRWQDPAFPKSFPWMAESDFWLQQTASFTEQVKLLQEP
PLQLMPMY

Specific function: Probably involved in the extracytoplasmic stress response [H]

COG id: COG2334

COG function: function code R; Putative homoserine kinase type II (protein kinase fold)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdoA family [H]

Homologues:

Organism=Escherichia coli, GI1790290, Length=328, Percent_Identity=66.1585365853659, Blast_Score=478, Evalue=1e-136,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 38315; Mature: 38315

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNSAFNFQTLSPDLIMDALEGAGLRVDSGLTALNSYENRVYQFMDEESKRYVVKFYRPE
CCCCCEEEEECCHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCC
RWSSEQITEEHQFSLDLAESEIPVIAPLRLNGKTLHTHCGFFFAVFPSVGGRQYEIDNLD
CCCCHHHHHHHHHEEEECCCCCCEEEEEEECCCEEEHHHHHHHHHHHCCCCCEEECCCCH
QLEWVGRFLGRIHQAARNSLFVARPTMGIEEYLTEPRQLLANCDLVPVKQRDKFLAAADL
HHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHH
LITTIKQYWHTEWQPLRLHGDCHPGNILWRDGPMFVDLDDARNGPAIQDLWMLLHGDRRD
HHHHHHHHHCCCCCEEEEECCCCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHCCCCCC
QSMQLDILLEAYSEFADFDQRELALIEPLRAMRMVYYLAWVARRWQDPAFPKSFPWMAES
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
DFWLQQTASFTEQVKLLQEPPLQLMPMY
CHHHHHHHHHHHHHHHHHCCCHHEECCC
>Mature Secondary Structure
MNNSAFNFQTLSPDLIMDALEGAGLRVDSGLTALNSYENRVYQFMDEESKRYVVKFYRPE
CCCCCEEEEECCHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCC
RWSSEQITEEHQFSLDLAESEIPVIAPLRLNGKTLHTHCGFFFAVFPSVGGRQYEIDNLD
CCCCHHHHHHHHHEEEECCCCCCEEEEEEECCCEEEHHHHHHHHHHHCCCCCEEECCCCH
QLEWVGRFLGRIHQAARNSLFVARPTMGIEEYLTEPRQLLANCDLVPVKQRDKFLAAADL
HHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHH
LITTIKQYWHTEWQPLRLHGDCHPGNILWRDGPMFVDLDDARNGPAIQDLWMLLHGDRRD
HHHHHHHHHCCCCCEEEEECCCCCCCEEEECCCEEEEECCCCCCCHHHHHHHHHCCCCCC
QSMQLDILLEAYSEFADFDQRELALIEPLRAMRMVYYLAWVARRWQDPAFPKSFPWMAES
CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
DFWLQQTASFTEQVKLLQEPPLQLMPMY
CHHHHHHHHHHHHHHHHHCCCHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]