Click here to switch to the map view.

The map label for this gene is yihD [H]

Identifier: 22127685

GI number: 22127685

Start: 4238111

End: 4238380

Strand: Reverse

Name: yihD [H]

Synonym: y3814

Alternate gene names: 22127685

Gene position: 4238380-4238111 (Counterclockwise)

Preceding gene: 22127688

Following gene: 22127684

Centisome position: 92.12

GC content: 41.11

Gene sequence:

>270_bases
ATGAAATGCCATCGTGTTAATGAATTGATTGAGCTTTTACATCCAGCTTGGCAGCAGGAGCCTGATTTAAACTTGGTACA
ATTTTTACAAAAATTGGCGGCAGAAGCGGGTTTTAAGGGGGATTTTTCGGATTTAACGGACGATGTTCTTATCTATCATC
TGAAAATGCGGGGCGCTGCATCAACCGAGGTGATCCCTGGCCTGAAAAAAGATTATGAAGAAGATTTTAAAACAGCACTG
TTGCGTGCTCGTGGCATTATTAAAGATTAG

Upstream 100 bases:

>100_bases
TAGGGGTTCAGGATTTACTTTTATTGACAATAGGCTCTCTTTCCCTACGTGAGTATCCCTGCTACTTTGTCAGCATCTTT
TTGAAGAGGATAAATTTGCT

Downstream 100 bases:

>100_bases
TCATACTCCTGTCTGCGGAGATAGGGGCTTTAATGATATTATTTATTATTCTCAGCGCGCTGCTGTCACTTATATAGACT
AAATGTTGTTATGAACAACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MKCHRVNELIELLHPAWQQEPDLNLVQFLQKLAAEAGFKGDFSDLTDDVLIYHLKMRGAASTEVIPGLKKDYEEDFKTAL
LRARGIIKD

Sequences:

>Translated_89_residues
MKCHRVNELIELLHPAWQQEPDLNLVQFLQKLAAEAGFKGDFSDLTDDVLIYHLKMRGAASTEVIPGLKKDYEEDFKTAL
LRARGIIKD
>Mature_89_residues
MKCHRVNELIELLHPAWQQEPDLNLVQFLQKLAAEAGFKGDFSDLTDDVLIYHLKMRGAASTEVIPGLKKDYEEDFKTAL
LRARGIIKD

Specific function: Unknown

COG id: COG3084

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0845 [H]

Homologues:

Organism=Escherichia coli, GI1790289, Length=89, Percent_Identity=76.4044943820225, Blast_Score=149, Evalue=4e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009383
- ProDom:   PD029038 [H]

Pfam domain/function: PF06288 DUF1040 [H]

EC number: NA

Molecular weight: Translated: 10168; Mature: 10168

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCHRVNELIELLHPAWQQEPDLNLVQFLQKLAAEAGFKGDFSDLTDDVLIYHLKMRGAA
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
STEVIPGLKKDYEEDFKTALLRARGIIKD
CCHHCCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKCHRVNELIELLHPAWQQEPDLNLVQFLQKLAAEAGFKGDFSDLTDDVLIYHLKMRGAA
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
STEVIPGLKKDYEEDFKTALLRARGIIKD
CCHHCCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]