Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
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Accession | NC_004088 |
Length | 4,600,755 |
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The map label for this gene is apaH [H]
Identifier: 22127559
GI number: 22127559
Start: 4096046
End: 4096915
Strand: Direct
Name: apaH [H]
Synonym: y3685
Alternate gene names: 22127559
Gene position: 4096046-4096915 (Clockwise)
Preceding gene: 22127558
Following gene: 22127565
Centisome position: 89.03
GC content: 48.16
Gene sequence:
>870_bases ATGTCTACTTATCTTATTGGTGATATTCATGGCTGCCTCGATGAATTACTTGCGCTTTTAGCCCAGGTGAATTTCGATCC ACAGCAGGATACTTTATGGCTGACGGGCGATTTAGTTGCCCGTGGTCCCGCTTCATTGGATGTTTTACGTTATGTACGTT CGTTAGGACCCGCAGTTCGTATGGTGCTGGGTAACCATGACCTGCATTTACTGGCAGTCTACGCGGGCATCAGCCGTAAT AAACCAAAAGATCGTATTACCCCGCTGCTGGATGCACCCGATGCTGATGAGCTAATTAATTGGCTACGTCGCCAACCCGT TTTGCAGGTTGATGACCAGCTTAAATTGATTATGGCCCACGCAGGCATCACACCACAGTGGGATATTGAAACGGCCAAAA TGTGTGCGCGAGAAGTTGAAGCGGTATTGAGCAGCGATAGTTATCCGCTATTTTTGGATGCGATGTACGGTGATATGCCA AACAACTGGTCACCAGAGCTTACCGGGCTGGCGCGTTTGCGCTTTAGTACCAATGCACTTACGCGGATGCGCTTTTGCTT CCCGAATGGCCAACTTGATATGATCTGCAAAGACACGCCAGAAAACGCGCCAGCCCCTCTCAAACCTTGGTTTGACCTAC CAAGGCTCGTTGACCCTGAATATTCAATTATTTTTGGTCATTGGGCATCATTGGAAGGTAAAGGTGTACCAGAGGGGATA TATGGACTGGACACTGGCTGTTGCTGGGGAGGGGATTTAACCCTACTTCGTTGGGACGATAAACGTTATTTCACACAGCG CGCTTTCAAAGCCGAGGCTGAAATTAATAATAACAATGGATTTGCAGCGGGCGAAGCAGTACAACACTAA
Upstream 100 bases:
>100_bases TATGAAATGATTGATCACCTTGGACAGGCCTTCCGTACTGTAATTCCGGTATTCCGCTTAGCGATCCCAGCCCTGATCCA CTAACCCTGACTCATTAACT
Downstream 100 bases:
>100_bases TTGGTGTGATGCCAAATTAATCTTGTAAAGACGCTAATTAAAGACGCATGAGCTTATGCGTCTTTAGATTTCACCTATAA TTAACAGCATCACTGTCTAT
Product: diadenosine tetraphosphatase
Products: NA
Alternate protein names: Ap4A hydrolase; Diadenosine 5',5'''-P1,P4-tetraphosphate pyrophosphohydrolase; Diadenosine tetraphosphatase [H]
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MSTYLIGDIHGCLDELLALLAQVNFDPQQDTLWLTGDLVARGPASLDVLRYVRSLGPAVRMVLGNHDLHLLAVYAGISRN KPKDRITPLLDAPDADELINWLRRQPVLQVDDQLKLIMAHAGITPQWDIETAKMCAREVEAVLSSDSYPLFLDAMYGDMP NNWSPELTGLARLRFSTNALTRMRFCFPNGQLDMICKDTPENAPAPLKPWFDLPRLVDPEYSIIFGHWASLEGKGVPEGI YGLDTGCCWGGDLTLLRWDDKRYFTQRAFKAEAEINNNNGFAAGEAVQH
Sequences:
>Translated_289_residues MSTYLIGDIHGCLDELLALLAQVNFDPQQDTLWLTGDLVARGPASLDVLRYVRSLGPAVRMVLGNHDLHLLAVYAGISRN KPKDRITPLLDAPDADELINWLRRQPVLQVDDQLKLIMAHAGITPQWDIETAKMCAREVEAVLSSDSYPLFLDAMYGDMP NNWSPELTGLARLRFSTNALTRMRFCFPNGQLDMICKDTPENAPAPLKPWFDLPRLVDPEYSIIFGHWASLEGKGVPEGI YGLDTGCCWGGDLTLLRWDDKRYFTQRAFKAEAEINNNNGFAAGEAVQH >Mature_288_residues STYLIGDIHGCLDELLALLAQVNFDPQQDTLWLTGDLVARGPASLDVLRYVRSLGPAVRMVLGNHDLHLLAVYAGISRNK PKDRITPLLDAPDADELINWLRRQPVLQVDDQLKLIMAHAGITPQWDIETAKMCAREVEAVLSSDSYPLFLDAMYGDMPN NWSPELTGLARLRFSTNALTRMRFCFPNGQLDMICKDTPENAPAPLKPWFDLPRLVDPEYSIIFGHWASLEGKGVPEGIY GLDTGCCWGGDLTLLRWDDKRYFTQRAFKAEAEINNNNGFAAGEAVQH
Specific function: Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP [H]
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Ap4A hydrolase family [H]
Homologues:
Organism=Escherichia coli, GI1786234, Length=266, Percent_Identity=80.0751879699248, Blast_Score=458, Evalue=1e-130,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004617 - InterPro: IPR004843 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: =3.6.1.41 [H]
Molecular weight: Translated: 32341; Mature: 32210
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTYLIGDIHGCLDELLALLAQVNFDPQQDTLWLTGDLVARGPASLDVLRYVRSLGPAVR CCCEEEEHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEECCCCHHHHHHHHHHHCHHHH MVLGNHDLHLLAVYAGISRNKPKDRITPLLDAPDADELINWLRRQPVLQVDDQLKLIMAH HHHCCCCEEEEEEEECCCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCEECCCHHEEEEEC AGITPQWDIETAKMCAREVEAVLSSDSYPLFLDAMYGDMPNNWSPELTGLARLRFSTNAL CCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHEEECCCHH TRMRFCFPNGQLDMICKDTPENAPAPLKPWFDLPRLVDPEYSIIFGHWASLEGKGVPEGI HEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCC YGLDTGCCWGGDLTLLRWDDKRYFTQRAFKAEAEINNNNGFAAGEAVQH CCCCCCCEECCCEEEEEECCHHHHHHHHHHHHEEEECCCCEECCHHCCC >Mature Secondary Structure STYLIGDIHGCLDELLALLAQVNFDPQQDTLWLTGDLVARGPASLDVLRYVRSLGPAVR CCEEEEHHHHHHHHHHHHHHHCCCCCCCCEEEEECCEEECCCCHHHHHHHHHHHCHHHH MVLGNHDLHLLAVYAGISRNKPKDRITPLLDAPDADELINWLRRQPVLQVDDQLKLIMAH HHHCCCCEEEEEEEECCCCCCCHHHCCCCCCCCCHHHHHHHHHHCCCEECCCHHEEEEEC AGITPQWDIETAKMCAREVEAVLSSDSYPLFLDAMYGDMPNNWSPELTGLARLRFSTNAL CCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHEEECCCHH TRMRFCFPNGQLDMICKDTPENAPAPLKPWFDLPRLVDPEYSIIFGHWASLEGKGVPEGI HEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCC YGLDTGCCWGGDLTLLRWDDKRYFTQRAFKAEAEINNNNGFAAGEAVQH CCCCCCCEECCCEEEEEECCHHHHHHHHHHHHEEEECCCCEECCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA