Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
---|---|
Accession | NC_004088 |
Length | 4,600,755 |
Click here to switch to the map view.
The map label for this gene is apaG [H]
Identifier: 22127558
GI number: 22127558
Start: 4095652
End: 4096029
Strand: Direct
Name: apaG [H]
Synonym: y3684
Alternate gene names: 22127558
Gene position: 4095652-4096029 (Clockwise)
Preceding gene: 22127557
Following gene: 22127559
Centisome position: 89.02
GC content: 48.15
Gene sequence:
>378_bases ATGATTGAACAGCCCCGTATTTGTGTGCAGGTACACAGTATCTATGTGGAAACGCAATCGATACCCGAAGAGGAACGTTT CGTCTTCGCCTATACCGTTACCGTTCGTAATTTAGGGCGTTCAAACGTGCAACTGCTTGGCCGCTATTGGTTAATTACCA ATAGCAATGGCCGCCAGACTGAAGTTCAGGGAGAAGGGGTTATCGGCGAACAACCACTTATCCTGCCAGGTAATGAATTT CAATACACCAGCGGTGCCGTTCTGGAAACTCCGCTGGGTACTATGGAAGGACATTATGAAATGATTGATCACCTTGGACA GGCCTTCCGTACTGTAATTCCGGTATTCCGCTTAGCGATCCCAGCCCTGATCCACTAA
Upstream 100 bases:
>100_bases CCGATACTCAGGGCAGAAAATATTTCGGTAGCGCAATACTGTAAGCTAGCTAACTGGCTTTCAGCTCAATCGACACCGCA GAAATAAGCAGGAGCACATC
Downstream 100 bases:
>100_bases CCCTGACTCATTAACTATGTCTACTTATCTTATTGGTGATATTCATGGCTGCCTCGATGAATTACTTGCGCTTTTAGCCC AGGTGAATTTCGATCCACAG
Product: ApaG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MIEQPRICVQVHSIYVETQSIPEEERFVFAYTVTVRNLGRSNVQLLGRYWLITNSNGRQTEVQGEGVIGEQPLILPGNEF QYTSGAVLETPLGTMEGHYEMIDHLGQAFRTVIPVFRLAIPALIH
Sequences:
>Translated_125_residues MIEQPRICVQVHSIYVETQSIPEEERFVFAYTVTVRNLGRSNVQLLGRYWLITNSNGRQTEVQGEGVIGEQPLILPGNEF QYTSGAVLETPLGTMEGHYEMIDHLGQAFRTVIPVFRLAIPALIH >Mature_125_residues MIEQPRICVQVHSIYVETQSIPEEERFVFAYTVTVRNLGRSNVQLLGRYWLITNSNGRQTEVQGEGVIGEQPLILPGNEF QYTSGAVLETPLGTMEGHYEMIDHLGQAFRTVIPVFRLAIPALIH
Specific function: Unknown
COG id: COG2967
COG function: function code P; Uncharacterized protein affecting Mg2+/Co2+ transport
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 apaG domain [H]
Homologues:
Organism=Homo sapiens, GI15812188, Length=123, Percent_Identity=34.9593495934959, Blast_Score=67, Evalue=3e-12, Organism=Homo sapiens, GI15812186, Length=123, Percent_Identity=34.9593495934959, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1786235, Length=125, Percent_Identity=72.8, Blast_Score=198, Evalue=7e-53, Organism=Drosophila melanogaster, GI21356905, Length=111, Percent_Identity=32.4324324324324, Blast_Score=65, Evalue=8e-12, Organism=Drosophila melanogaster, GI24644238, Length=111, Percent_Identity=32.4324324324324, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007474 - InterPro: IPR023065 [H]
Pfam domain/function: PF04379 DUF525 [H]
EC number: NA
Molecular weight: Translated: 14126; Mature: 14126
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: PS51087 APAG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEQPRICVQVHSIYVETQSIPEEERFVFAYTVTVRNLGRSNVQLLGRYWLITNSNGRQT CCCCCCEEEEEEEEEEECCCCCCCCCEEEEEEEEEECCCCCCEEEEEEEEEEECCCCCEE EVQGEGVIGEQPLILPGNEFQYTSGAVLETPLGTMEGHYEMIDHLGQAFRTVIPVFRLAI EECCCCCCCCCCEEECCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH PALIH HHHCC >Mature Secondary Structure MIEQPRICVQVHSIYVETQSIPEEERFVFAYTVTVRNLGRSNVQLLGRYWLITNSNGRQT CCCCCCEEEEEEEEEEECCCCCCCCCEEEEEEEEEECCCCCCEEEEEEEEEEECCCCCEE EVQGEGVIGEQPLILPGNEFQYTSGAVLETPLGTMEGHYEMIDHLGQAFRTVIPVFRLAI EECCCCCCCCCCEEECCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH PALIH HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA