Definition | Mycobacterium leprae Br4923 chromosome, complete genome. |
---|---|
Accession | NC_011896 |
Length | 3,268,071 |
Click here to switch to the map view.
The map label for this gene is pgsA [H]
Identifier: 221229623
GI number: 221229623
Start: 554342
End: 555061
Strand: Reverse
Name: pgsA [H]
Synonym: MLBr_00454
Alternate gene names: 221229623
Gene position: 555061-554342 (Counterclockwise)
Preceding gene: 221229624
Following gene: 221229622
Centisome position: 16.98
GC content: 62.08
Gene sequence:
>720_bases ATGAGCAAGGTGCCATTCCTGTCCCGGGCGACGTTTACGCGGCTCACGACTCCGACCGCAAGAGCGTTGCTGCGGGTCGG CTTGACGCCGGATGCCATCACCGTCTTAGGCACCATCGTGGCTGCGTCGGGGGCGCTGGTACTTTTCCCGATCGGCAAAC TCTTCGCCGGTACTCTGGTAGTCTGGTTTTTCGTACTTTTCGACATGCTCGACGGGGCGATGGCCAGGGAACGTGGCGGC GGCACCCGGTACGGCGCGGTTCTCGATGCGACGTGTGACCGTATCAGTGACGGAGCGGTATTCTGCGGACTGCTGTGGTG GATGGCGTTCGGCCTGCACAGCAAACACCTGGTGGTGGCAACCTTGATCTGTTTGGTCACCTCGCAGGTGATTTCTTACA TCAAGGCCCGGGCCGAAGCCAGCGGGCTACGCGGCGATGATGGCCTCATCGAACGGCCGGAACGTTTGATCATCGTGCTG GTCGGTGCGGGCTTATCGGACTTTCCGGTGTATTCGTTGCCGTGGGCGTTGTCGGTGGCGATGTGGCTGTTAGTGGTCGC CAGCCTCATCACCTGTGCGCAACGGTTGCACACAGTGCACACCTCGCCGGGGGCAACCGATCGCATTGCCAGACCAGGCT ACCCTAGCGCTAGCGACAGGACTAACGCGACGAATGGGGGCCAACCCGGTCCCGGAAACCTGGGAACAGGCGAGCCGTGA
Upstream 100 bases:
>100_bases AAGTGATCCCGCAGTTGCTCCGGGATACTCGACAGCTGCTTGCGACGGAGTGGACGAAACAGTTTATGAGCCGCAGTGGC GACGATGCAGAGCGAAGCTT
Downstream 100 bases:
>100_bases CAACCAGCACAGCGGGGCTGAAAATGATCAGGGCTCCGCATCGGCTAATGACCGGGCGGGCCATCGACTGGGCGTATGCG GCTGGCTGGAGGGCTGTGCG
Product: putative phosphatidyltransferase
Products: NA
Alternate protein names: Phosphatidylinositol synthase; PI synthase [H]
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MSKVPFLSRATFTRLTTPTARALLRVGLTPDAITVLGTIVAASGALVLFPIGKLFAGTLVVWFFVLFDMLDGAMARERGG GTRYGAVLDATCDRISDGAVFCGLLWWMAFGLHSKHLVVATLICLVTSQVISYIKARAEASGLRGDDGLIERPERLIIVL VGAGLSDFPVYSLPWALSVAMWLLVVASLITCAQRLHTVHTSPGATDRIARPGYPSASDRTNATNGGQPGPGNLGTGEP
Sequences:
>Translated_239_residues MSKVPFLSRATFTRLTTPTARALLRVGLTPDAITVLGTIVAASGALVLFPIGKLFAGTLVVWFFVLFDMLDGAMARERGG GTRYGAVLDATCDRISDGAVFCGLLWWMAFGLHSKHLVVATLICLVTSQVISYIKARAEASGLRGDDGLIERPERLIIVL VGAGLSDFPVYSLPWALSVAMWLLVVASLITCAQRLHTVHTSPGATDRIARPGYPSASDRTNATNGGQPGPGNLGTGEP >Mature_238_residues SKVPFLSRATFTRLTTPTARALLRVGLTPDAITVLGTIVAASGALVLFPIGKLFAGTLVVWFFVLFDMLDGAMARERGGG TRYGAVLDATCDRISDGAVFCGLLWWMAFGLHSKHLVVATLICLVTSQVISYIKARAEASGLRGDDGLIERPERLIIVLV GAGLSDFPVYSLPWALSVAMWLLVVASLITCAQRLHTVHTSPGATDRIARPGYPSASDRTNATNGGQPGPGNLGTGEP
Specific function: Unknown
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.11 [H]
Molecular weight: Translated: 25282; Mature: 25151
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKVPFLSRATFTRLTTPTARALLRVGLTPDAITVLGTIVAASGALVLFPIGKLFAGTLV CCCCCCCHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHH VWFFVLFDMLDGAMARERGGGTRYGAVLDATCDRISDGAVFCGLLWWMAFGLHSKHLVVA HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHH TLICLVTSQVISYIKARAEASGLRGDDGLIERPERLIIVLVGAGLSDFPVYSLPWALSVA HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHH MWLLVVASLITCAQRLHTVHTSPGATDRIARPGYPSASDRTNATNGGQPGPGNLGTGEP HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SKVPFLSRATFTRLTTPTARALLRVGLTPDAITVLGTIVAASGALVLFPIGKLFAGTLV CCCCCCHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHH VWFFVLFDMLDGAMARERGGGTRYGAVLDATCDRISDGAVFCGLLWWMAFGLHSKHLVVA HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHH TLICLVTSQVISYIKARAEASGLRGDDGLIERPERLIIVLVGAGLSDFPVYSLPWALSVA HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCEEEEEEEECCCCCCCCHHHHHHHHHH MWLLVVASLITCAQRLHTVHTSPGATDRIARPGYPSASDRTNATNGGQPGPGNLGTGEP HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12368430; 12218036; 10889206 [H]