Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
---|---|
Accession | NC_011899 |
Length | 2,578,146 |
Click here to switch to the map view.
The map label for this gene is 220933084
Identifier: 220933084
GI number: 220933084
Start: 2454555
End: 2455301
Strand: Reverse
Name: 220933084
Synonym: Hore_22520
Alternate gene names: NA
Gene position: 2455301-2454555 (Counterclockwise)
Preceding gene: 220933085
Following gene: 220933083
Centisome position: 95.24
GC content: 41.63
Gene sequence:
>747_bases ATGGAGGAACGCAAGAAAATAAGGGAAGCCTTAAAGGAAACAGAAATACTGAAATTTCCTGATAAACTGATATCACCATC ACAGAGTACGACCCTGCATTATTTCGTTCTGGCCGAACCATATTACCTGGAAGTACTCGAAAACGAAGGTCCGGAAACCA AAGTCAGAGAAGGGAAAATAACCTGGGAGAAACCAAAACTTTTGACACCAGGTTATGTTTTGAATATGGAGGGCTTCAGT AAGGAAGCTAAAAAGGCCTTGCAGCTGATGTCCCAAAACCACCCGGATCTGGCCGGTTTTTTATACAAGATGAACTACAA AAAGGAGTCCTTAAGGACCTTCAGTGTCTCCAAATCCATTGAACAGACCAGTGACCGCATTAAGGATGAAATCAAGGAAA AAGGAGATACCATGACTGCAATAATAAAGGGTATAGATGAACTCTGGGATGTCTCTTTGATGAAACTTGTTCAGGAGCTG ATTATAAAGAGCATGTATAAATCCCAGATTCCTTATTATGAAGATCGTGGCTTTTTGAGTACCGATGATAAAGGGTATTA TGTTGTAACCCGTAACCTGGAAGGGTTGCCAATAGCTGTCAGTGAGGAGATTGAAAAGATGTTTGACAGGGTAAAAAGTG GTGACCTTGACCCTTCAGTACTGAAAAGGGAACTGGATCGCTGGGGGGTTTTTGAAGCTTACCAGGATAGGTTTTTCGAT CTTTTTAGAAAGGGTGGTGGAAGGTAA
Upstream 100 bases:
>100_bases AAACTGATAACAGTAGTTTAATATTCCAGGCAGGTTGAAATTTTAGTTAGACTGGAGTCAGGTTTAAAGAATAAATAACA TCAGGAAAGGAGGTTATAAG
Downstream 100 bases:
>100_bases ATGAAAAGGATCAAGAGTGCTCTGGAAATTGCCCTGGAAAGAGCGGAAGACCTGGCTAAAAAAAGCGGTGATACAGATGG TAAGCTCGAAAAAAGAGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MEERKKIREALKETEILKFPDKLISPSQSTTLHYFVLAEPYYLEVLENEGPETKVREGKITWEKPKLLTPGYVLNMEGFS KEAKKALQLMSQNHPDLAGFLYKMNYKKESLRTFSVSKSIEQTSDRIKDEIKEKGDTMTAIIKGIDELWDVSLMKLVQEL IIKSMYKSQIPYYEDRGFLSTDDKGYYVVTRNLEGLPIAVSEEIEKMFDRVKSGDLDPSVLKRELDRWGVFEAYQDRFFD LFRKGGGR
Sequences:
>Translated_248_residues MEERKKIREALKETEILKFPDKLISPSQSTTLHYFVLAEPYYLEVLENEGPETKVREGKITWEKPKLLTPGYVLNMEGFS KEAKKALQLMSQNHPDLAGFLYKMNYKKESLRTFSVSKSIEQTSDRIKDEIKEKGDTMTAIIKGIDELWDVSLMKLVQEL IIKSMYKSQIPYYEDRGFLSTDDKGYYVVTRNLEGLPIAVSEEIEKMFDRVKSGDLDPSVLKRELDRWGVFEAYQDRFFD LFRKGGGR >Mature_248_residues MEERKKIREALKETEILKFPDKLISPSQSTTLHYFVLAEPYYLEVLENEGPETKVREGKITWEKPKLLTPGYVLNMEGFS KEAKKALQLMSQNHPDLAGFLYKMNYKKESLRTFSVSKSIEQTSDRIKDEIKEKGDTMTAIIKGIDELWDVSLMKLVQEL IIKSMYKSQIPYYEDRGFLSTDDKGYYVVTRNLEGLPIAVSEEIEKMFDRVKSGDLDPSVLKRELDRWGVFEAYQDRFFD LFRKGGGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28910; Mature: 28910
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEERKKIREALKETEILKFPDKLISPSQSTTLHYFVLAEPYYLEVLENEGPETKVREGKI CCHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCCCE TWEKPKLLTPGYVLNMEGFSKEAKKALQLMSQNHPDLAGFLYKMNYKKESLRTFSVSKSI EECCCCEECCCEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHH EQTSDRIKDEIKEKGDTMTAIIKGIDELWDVSLMKLVQELIIKSMYKSQIPYYEDRGFLS HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC TDDKGYYVVTRNLEGLPIAVSEEIEKMFDRVKSGDLDPSVLKRELDRWGVFEAYQDRFFD CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHH LFRKGGGR HHHHCCCC >Mature Secondary Structure MEERKKIREALKETEILKFPDKLISPSQSTTLHYFVLAEPYYLEVLENEGPETKVREGKI CCHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEEEEECCCHHHHHHHCCCCCCCCCCCCE TWEKPKLLTPGYVLNMEGFSKEAKKALQLMSQNHPDLAGFLYKMNYKKESLRTFSVSKSI EECCCCEECCCEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHH EQTSDRIKDEIKEKGDTMTAIIKGIDELWDVSLMKLVQELIIKSMYKSQIPYYEDRGFLS HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC TDDKGYYVVTRNLEGLPIAVSEEIEKMFDRVKSGDLDPSVLKRELDRWGVFEAYQDRFFD CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHH LFRKGGGR HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA