Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
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Accession | NC_011899 |
Length | 2,578,146 |
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The map label for this gene is 220933083
Identifier: 220933083
GI number: 220933083
Start: 2453955
End: 2454554
Strand: Reverse
Name: 220933083
Synonym: Hore_22510
Alternate gene names: NA
Gene position: 2454554-2453955 (Counterclockwise)
Preceding gene: 220933084
Following gene: 220933082
Centisome position: 95.21
GC content: 40.33
Gene sequence:
>600_bases ATGAAAAGGATCAAGAGTGCTCTGGAAATTGCCCTGGAAAGAGCGGAAGACCTGGCTAAAAAAAGCGGTGATACAGATGG TAAGCTCGAAAAAAGAGAGGAAGCAAAACCCATCCTTGCCAGGTTTTTTAAGGATGAGATTGATGCTGAAGGACTCTGGA AGGAGTTAAAGGAAAAAAATGACTCTGAGCTTCTTGTAGTTACCCAGCGTTTGATGGCAGAGTCCCTGGGTTTAAAAATA AGTCCAGAAGATATAAAAAAGAGAAAAGAGGGGATTCTGGCCATTGAATCCTTAAAGCAGGACAATAATAGTTCAATTCT GGAACAGTTATTAAACCAGATTACCATGCTGGTCGAAAACTACAGTCAGGAACGGGAAAGAATAGAAGAACAATTTAAAA ACCTGGTTGAAAAGAATTCTCGCCTGAAAATTAAACCGGTCAAGACCAGAGACGGGAAGACTGTTATGCAGGTTCAGTCC GATGTGGATGATGACATTAAGAAAAAGGTTTCAGAAAGAATGAATCAGTTTGAGGAAGCCTATGAGCAGAAGTTTAATGC CCTCTTGGAAGGGTTGAAAGAGCAGTTAGATGCTAATTAA
Upstream 100 bases:
>100_bases TGACCCTTCAGTACTGAAAAGGGAACTGGATCGCTGGGGGGTTTTTGAAGCTTACCAGGATAGGTTTTTCGATCTTTTTA GAAAGGGTGGTGGAAGGTAA
Downstream 100 bases:
>100_bases GAAGACCTTTACCTGGCAGGTGATATAAGGTTATCACCTGCTTTTTTATTTAATAAACATTTTATAATATAAATTCAGGA ATCAGATAACATATATTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MKRIKSALEIALERAEDLAKKSGDTDGKLEKREEAKPILARFFKDEIDAEGLWKELKEKNDSELLVVTQRLMAESLGLKI SPEDIKKRKEGILAIESLKQDNNSSILEQLLNQITMLVENYSQERERIEEQFKNLVEKNSRLKIKPVKTRDGKTVMQVQS DVDDDIKKKVSERMNQFEEAYEQKFNALLEGLKEQLDAN
Sequences:
>Translated_199_residues MKRIKSALEIALERAEDLAKKSGDTDGKLEKREEAKPILARFFKDEIDAEGLWKELKEKNDSELLVVTQRLMAESLGLKI SPEDIKKRKEGILAIESLKQDNNSSILEQLLNQITMLVENYSQERERIEEQFKNLVEKNSRLKIKPVKTRDGKTVMQVQS DVDDDIKKKVSERMNQFEEAYEQKFNALLEGLKEQLDAN >Mature_199_residues MKRIKSALEIALERAEDLAKKSGDTDGKLEKREEAKPILARFFKDEIDAEGLWKELKEKNDSELLVVTQRLMAESLGLKI SPEDIKKRKEGILAIESLKQDNNSSILEQLLNQITMLVENYSQERERIEEQFKNLVEKNSRLKIKPVKTRDGKTVMQVQS DVDDDIKKKVSERMNQFEEAYEQKFNALLEGLKEQLDAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23052; Mature: 23052
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIKSALEIALERAEDLAKKSGDTDGKLEKREEAKPILARFFKDEIDAEGLWKELKEKN CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC DSELLVVTQRLMAESLGLKISPEDIKKRKEGILAIESLKQDNNSSILEQLLNQITMLVEN CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH YSQERERIEEQFKNLVEKNSRLKIKPVKTRDGKTVMQVQSDVDDDIKKKVSERMNQFEEA HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH YEQKFNALLEGLKEQLDAN HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKRIKSALEIALERAEDLAKKSGDTDGKLEKREEAKPILARFFKDEIDAEGLWKELKEKN CHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC DSELLVVTQRLMAESLGLKISPEDIKKRKEGILAIESLKQDNNSSILEQLLNQITMLVEN CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH YSQERERIEEQFKNLVEKNSRLKIKPVKTRDGKTVMQVQSDVDDDIKKKVSERMNQFEEA HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH YEQKFNALLEGLKEQLDAN HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA