Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

Click here to switch to the map view.

The map label for this gene is 220932334

Identifier: 220932334

GI number: 220932334

Start: 1598096

End: 1598584

Strand: Direct

Name: 220932334

Synonym: Hore_14975

Alternate gene names: NA

Gene position: 1598096-1598584 (Clockwise)

Preceding gene: 220932333

Following gene: 220932335

Centisome position: 61.99

GC content: 39.26

Gene sequence:

>489_bases
ATGGTTAACTACAGGTATGGGAAAAACCTCCCCTCCTTCAAAAAAACTACTGCTGAAATTATTAATATCCTGAAGGAAAA
AGATATTAAAAAACTTGTCATTGATTTACGTCATAACGGAGGCGGCTCCTCTCCCCAGGGGTCACGGTTTGCCAGACAGT
TAAAAAACCTTAACCTGGATACAGATATCTATGTAGTTATCGGTAACAGGACCTTTTCTGCGGCTACTATAAATGCTATT
CACTTCAAAGAATACACTAAAGCAACCCTGATAGGAGAGCCAACCAGTGGTAAACCCAATCATTATGGTGAAGTCAAGAC
CTTTAAATTACCCAACACAGGGATGCTAGTCCATTATTCAACCAAATATATTACCCTTATAGATAACGCTGACCCCGACT
CCATCTACCCCGATATCTATTGTTATGTAAAATTTAGCGACTTTGTCAACGGAGTCGATACCATCCTGGAGAAAATAAAA
AGGTTATAG

Upstream 100 bases:

>100_bases
TAACAGACTTTTTTGGTATAAATACCTCCCGGACAGTAACATATTATACTTCCAGTATAATAAATGCTGAAGTAAAGAAT
TAAACGAAAAATATGGGAAA

Downstream 100 bases:

>100_bases
TTAAAATAAACTATTTGTCAATTTAATAATAAGGGGACTTTAATAATTGACCTTCAATTATTAATTACAGACTGAAGATT
AAATCAAAAACAGAGGGAAA

Product: peptidase S41

Products: NA

Alternate protein names: Peptidase S; S41 Family Peptidase

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MVNYRYGKNLPSFKKTTAEIINILKEKDIKKLVIDLRHNGGGSSPQGSRFARQLKNLNLDTDIYVVIGNRTFSAATINAI
HFKEYTKATLIGEPTSGKPNHYGEVKTFKLPNTGMLVHYSTKYITLIDNADPDSIYPDIYCYVKFSDFVNGVDTILEKIK
RL

Sequences:

>Translated_162_residues
MVNYRYGKNLPSFKKTTAEIINILKEKDIKKLVIDLRHNGGGSSPQGSRFARQLKNLNLDTDIYVVIGNRTFSAATINAI
HFKEYTKATLIGEPTSGKPNHYGEVKTFKLPNTGMLVHYSTKYITLIDNADPDSIYPDIYCYVKFSDFVNGVDTILEKIK
RL
>Mature_162_residues
MVNYRYGKNLPSFKKTTAEIINILKEKDIKKLVIDLRHNGGGSSPQGSRFARQLKNLNLDTDIYVVIGNRTFSAATINAI
HFKEYTKATLIGEPTSGKPNHYGEVKTFKLPNTGMLVHYSTKYITLIDNADPDSIYPDIYCYVKFSDFVNGVDTILEKIK
RL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18338; Mature: 18338

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNYRYGKNLPSFKKTTAEIINILKEKDIKKLVIDLRHNGGGSSPQGSRFARQLKNLNLD
CCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCC
TDIYVVIGNRTFSAATINAIHFKEYTKATLIGEPTSGKPNHYGEVKTFKLPNTGMLVHYS
CEEEEEECCCEECCEEEEEEEHHCCCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEC
TKYITLIDNADPDSIYPDIYCYVKFSDFVNGVDTILEKIKRL
CEEEEEEECCCCCCCCCCEEEEEEEHHHHCHHHHHHHHHHCC
>Mature Secondary Structure
MVNYRYGKNLPSFKKTTAEIINILKEKDIKKLVIDLRHNGGGSSPQGSRFARQLKNLNLD
CCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCC
TDIYVVIGNRTFSAATINAIHFKEYTKATLIGEPTSGKPNHYGEVKTFKLPNTGMLVHYS
CEEEEEECCCEECCEEEEEEEHHCCCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEC
TKYITLIDNADPDSIYPDIYCYVKFSDFVNGVDTILEKIKRL
CEEEEEEECCCCCCCCCCEEEEEEEHHHHCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA