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The map label for this gene is ygeR [C]

Identifier: 220931943

GI number: 220931943

Start: 1195887

End: 1196861

Strand: Direct

Name: ygeR [C]

Synonym: Hore_11020

Alternate gene names: 220931943

Gene position: 1195887-1196861 (Clockwise)

Preceding gene: 220931942

Following gene: 220931946

Centisome position: 46.39

GC content: 40.41

Gene sequence:

>975_bases
ATGATAATTAGTAGTCCCGTCCTTGCCACCACCCTGAAGTTGGGTGATAGGGGAAGGGAAGTAAAAAAGGTTCAACAGAT
TTTAAGGGACCTGGGGTATGACATTGAAGTTGACAGTGTCTTTGGTTATAGAACAAAACAGGTTGTGCAGGCTTTTCAGT
TAAATAATGGATTGGATGTAGATGGTATTGTTGGTGATAAGACTTTAAATTTACTGCATGAAATGGTAGAAGAAACTAAA
TATATAGTTAACAAGGGGGATACCCTGTCTGAAATCGCCCTGAAAACAGGGTCTACCGTACAGGCAATAAAAGATAGAAA
TAATCTTAAATCTTCTAAGATTTATACAGGTCAAAAATTATATATCCCTAAAACAGGTATTGGTGGCGGTAAGGATGGAA
TACTCTATGATAGAATAATACATGTTGTCCAGCGGGGAGATGCCCTCTATAATCTTGCTAAAAGATATGGGACTGAAGTG
GAAACAATTAAACTGGCCAATAACCTTCATAGCAACCGTATTTTTGTAGGACAGACCCTGGTTATACCCCACCTTAAAGA
AGGAAGGAAACATAATTTCAGGCTTAAAAAGGGAGCTTTTATATGGCCTGTGCTCGGCCGGATTTCTTCACCATATGGGT
ACAGGATCCATCCTATAACCAACAAACGTGAATTTCATGGCGGTATAGATATAGCTGTTCCTATTGGTACCAGAATTAGA
GCTGCTGCCAGTGGTACCGTTATCCAGAGTGGCTGGATAAGGGGGTTTGGGAAAACCATAATTATTGACCATGAAAATGG
TATCAGAACCCTTTATGCCCATAATTCACGTCTGTTAATAAGAGCCGGTCAAAAGGTGAAACTGGGGGATGTTATTGCAC
TGGCAGGGAGTACCGGGATGAGTACCGGTCCCCATCTGGACTTCAGGATTTATAATAAGGGGAAAACAGTGAACCCGATT
AATTATTTACCTTAA

Upstream 100 bases:

>100_bases
TCTAAATGGTATATATAACCAGTTTCTTAAAAGAGGGTGGGGGTGATTTAAAATAAATAAAAAAATTTTTAAGGCAATTA
TAATATTTATAATTATTACT

Downstream 100 bases:

>100_bases
ATTATATTAGGAAATAAAATAAACTAAAAATTATATAGGAAATAACATAAACTAAGTCTGGAATATAACAATACTTTGTC
AGGTTATCTATTATGATATT

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MIISSPVLATTLKLGDRGREVKKVQQILRDLGYDIEVDSVFGYRTKQVVQAFQLNNGLDVDGIVGDKTLNLLHEMVEETK
YIVNKGDTLSEIALKTGSTVQAIKDRNNLKSSKIYTGQKLYIPKTGIGGGKDGILYDRIIHVVQRGDALYNLAKRYGTEV
ETIKLANNLHSNRIFVGQTLVIPHLKEGRKHNFRLKKGAFIWPVLGRISSPYGYRIHPITNKREFHGGIDIAVPIGTRIR
AAASGTVIQSGWIRGFGKTIIIDHENGIRTLYAHNSRLLIRAGQKVKLGDVIALAGSTGMSTGPHLDFRIYNKGKTVNPI
NYLP

Sequences:

>Translated_324_residues
MIISSPVLATTLKLGDRGREVKKVQQILRDLGYDIEVDSVFGYRTKQVVQAFQLNNGLDVDGIVGDKTLNLLHEMVEETK
YIVNKGDTLSEIALKTGSTVQAIKDRNNLKSSKIYTGQKLYIPKTGIGGGKDGILYDRIIHVVQRGDALYNLAKRYGTEV
ETIKLANNLHSNRIFVGQTLVIPHLKEGRKHNFRLKKGAFIWPVLGRISSPYGYRIHPITNKREFHGGIDIAVPIGTRIR
AAASGTVIQSGWIRGFGKTIIIDHENGIRTLYAHNSRLLIRAGQKVKLGDVIALAGSTGMSTGPHLDFRIYNKGKTVNPI
NYLP
>Mature_324_residues
MIISSPVLATTLKLGDRGREVKKVQQILRDLGYDIEVDSVFGYRTKQVVQAFQLNNGLDVDGIVGDKTLNLLHEMVEETK
YIVNKGDTLSEIALKTGSTVQAIKDRNNLKSSKIYTGQKLYIPKTGIGGGKDGILYDRIIHVVQRGDALYNLAKRYGTEV
ETIKLANNLHSNRIFVGQTLVIPHLKEGRKHNFRLKKGAFIWPVLGRISSPYGYRIHPITNKREFHGGIDIAVPIGTRIR
AAASGTVIQSGWIRGFGKTIIIDHENGIRTLYAHNSRLLIRAGQKVKLGDVIALAGSTGMSTGPHLDFRIYNKGKTVNPI
NYLP

Specific function: Unknown

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87082174, Length=227, Percent_Identity=30.3964757709251, Blast_Score=92, Evalue=6e-20,
Organism=Escherichia coli, GI87081989, Length=129, Percent_Identity=37.984496124031, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI1789099, Length=267, Percent_Identity=29.9625468164794, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI87082297, Length=127, Percent_Identity=33.8582677165354, Blast_Score=82, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 35905; Mature: 35905

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIISSPVLATTLKLGDRGREVKKVQQILRDLGYDIEVDSVFGYRTKQVVQAFQLNNGLDV
CEECCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHCCCCCCC
DGIVGDKTLNLLHEMVEETKYIVNKGDTLSEIALKTGSTVQAIKDRNNLKSSKIYTGQKL
CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHCCCCCCCEEECCCEE
YIPKTGIGGGKDGILYDRIIHVVQRGDALYNLAKRYGTEVETIKLANNLHSNRIFVGQTL
EEECCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEEEE
VIPHLKEGRKHNFRLKKGAFIWPVLGRISSPYGYRIHPITNKREFHGGIDIAVPIGTRIR
ECCCCCCCCCCCEEEECCCEEEHHHHHCCCCCCEEEEECCCCCHHCCCEEEEEECCCEEE
AAASGTVIQSGWIRGFGKTIIIDHENGIRTLYAHNSRLLIRAGQKVKLGDVIALAGSTGM
ECCCCCEEECCCCCCCCCEEEEECCCCEEEEEECCCEEEEECCCEEEECCEEEEECCCCC
STGPHLDFRIYNKGKTVNPINYLP
CCCCCEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MIISSPVLATTLKLGDRGREVKKVQQILRDLGYDIEVDSVFGYRTKQVVQAFQLNNGLDV
CEECCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHCCCCCCC
DGIVGDKTLNLLHEMVEETKYIVNKGDTLSEIALKTGSTVQAIKDRNNLKSSKIYTGQKL
CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHCCCCCCCEEECCCEE
YIPKTGIGGGKDGILYDRIIHVVQRGDALYNLAKRYGTEVETIKLANNLHSNRIFVGQTL
EEECCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEEEE
VIPHLKEGRKHNFRLKKGAFIWPVLGRISSPYGYRIHPITNKREFHGGIDIAVPIGTRIR
ECCCCCCCCCCCEEEECCCEEEHHHHHCCCCCCEEEEECCCCCHHCCCEEEEEECCCEEE
AAASGTVIQSGWIRGFGKTIIIDHENGIRTLYAHNSRLLIRAGQKVKLGDVIALAGSTGM
ECCCCCEEECCCCCCCCCEEEEECCCCEEEEEECCCEEEEECCCEEEECCEEEEECCCCC
STGPHLDFRIYNKGKTVNPINYLP
CCCCCEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12089438 [H]