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The map label for this gene is obg [H]

Identifier: 220931946

GI number: 220931946

Start: 1200368

End: 1201087

Strand: Direct

Name: obg [H]

Synonym: Hore_11060

Alternate gene names: 220931946

Gene position: 1200368-1201087 (Clockwise)

Preceding gene: 220931943

Following gene: 220931947

Centisome position: 46.56

GC content: 34.58

Gene sequence:

>720_bases
ATGAAATTAAAATATATTTTTGGACCGGTTTTATCGAGAAGACTGGGAAAATCCCTTGGAATTGATTTAATTCCCTTTAA
AACCTGTTCCCTGGACTGTGTTTACTGTGAATGTGGTAAAACAGATAAACTGACCCTGGAGAGGAAAGAGTATGTACCGA
CTGAGGAGGTAATTAATGAACTAAAAAAATATCTGTATAACAGACCGAAGTTAGATTATATTACCTTTTCCGGTTCTGGA
GAGCCGACCCTTCATAAGGGTATCGGAGAAATTATTTCTTTTTTAAAAGATAATTATCCCGAATATAAGGTGGCCCTACT
GACCAATAGCACTCTTTTATACCGTAATCAGGTTATTTCAGAAATTAAAGGGTGTGATTTGATTGTACCTTCATTAGATG
CTGTATCAGAAGAGATATTCCAAAAAATAAATAGACCTGTGTCTGGTTTGAATGCAGAATTAATAGTAAAGGGTTTGATA
AACCTCAGGAAAAACTATAACGGTAAAATGTGGCTGGAAATATTCATAATTCCGGATTTGAATGATAATAAAAAGGAGTT
AATGCTATTCAAGGAAGCAATTAATAGAATAAAACCCGATAAGATTCAGTTAAATGTCCTGGACCGACCAGGAACAGAAA
ATTGGGTAAAACGTATACCAGAAGAAAGGCTTATGGAAATAGCTGAATACCTGGGTGATAATGTAGAGGTTATTACTTAA

Upstream 100 bases:

>100_bases
AAAATAAATATGATTTTTTTAAAATAATTTGTTATAATAGTCAAGAAAGTAAGATTATTGTGGAAGGTTAAAATTTATGA
CCTTTAGAAAGGTGGGGAAT

Downstream 100 bases:

>100_bases
AAAATTTTTTAATTTATTGCTTGACAACTCAAAATAAAGATGTTAATATATTTAACGTCGTCAACGAGGTGGGCCATTAG
CTCAGTTGGTAGAGCACCTG

Product: Radical SAM domain-containing protein

Products: NA

Alternate protein names: GTP-binding protein obg [H]

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MKLKYIFGPVLSRRLGKSLGIDLIPFKTCSLDCVYCECGKTDKLTLERKEYVPTEEVINELKKYLYNRPKLDYITFSGSG
EPTLHKGIGEIISFLKDNYPEYKVALLTNSTLLYRNQVISEIKGCDLIVPSLDAVSEEIFQKINRPVSGLNAELIVKGLI
NLRKNYNGKMWLEIFIIPDLNDNKKELMLFKEAINRIKPDKIQLNVLDRPGTENWVKRIPEERLMEIAEYLGDNVEVIT

Sequences:

>Translated_239_residues
MKLKYIFGPVLSRRLGKSLGIDLIPFKTCSLDCVYCECGKTDKLTLERKEYVPTEEVINELKKYLYNRPKLDYITFSGSG
EPTLHKGIGEIISFLKDNYPEYKVALLTNSTLLYRNQVISEIKGCDLIVPSLDAVSEEIFQKINRPVSGLNAELIVKGLI
NLRKNYNGKMWLEIFIIPDLNDNKKELMLFKEAINRIKPDKIQLNVLDRPGTENWVKRIPEERLMEIAEYLGDNVEVIT
>Mature_239_residues
MKLKYIFGPVLSRRLGKSLGIDLIPFKTCSLDCVYCECGKTDKLTLERKEYVPTEEVINELKKYLYNRPKLDYITFSGSG
EPTLHKGIGEIISFLKDNYPEYKVALLTNSTLLYRNQVISEIKGCDLIVPSLDAVSEEIFQKINRPVSGLNAELIVKGLI
NLRKNYNGKMWLEIFIIPDLNDNKKELMLFKEAINRIKPDKIQLNVLDRPGTENWVKRIPEERLMEIAEYLGDNVEVIT

Specific function: An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. It may play a role in control of the cell cycle, stress response, ribosome biogenesis and in t

COG id: COG0731

COG function: function code C; Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR014100
- InterPro:   IPR006074
- InterPro:   IPR006073
- InterPro:   IPR006169
- InterPro:   IPR002917
- InterPro:   IPR007197 [H]

Pfam domain/function: PF01018 GTP1_OBG; PF01926 MMR_HSR1; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 27520; Mature: 27520

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKYIFGPVLSRRLGKSLGIDLIPFKTCSLDCVYCECGKTDKLTLERKEYVPTEEVINE
CCCHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEEECCCCCCCEEECHHHCCCHHHHHHH
LKKYLYNRPKLDYITFSGSGEPTLHKGIGEIISFLKDNYPEYKVALLTNSTLLYRNQVIS
HHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHH
EIKGCDLIVPSLDAVSEEIFQKINRPVSGLNAELIVKGLINLRKNYNGKMWLEIFIIPDL
HHCCCEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECC
NDNKKELMLFKEAINRIKPDKIQLNVLDRPGTENWVKRIPEERLMEIAEYLGDNVEVIT
CCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHCCHHHHHHHHHHHCCCEEEEC
>Mature Secondary Structure
MKLKYIFGPVLSRRLGKSLGIDLIPFKTCSLDCVYCECGKTDKLTLERKEYVPTEEVINE
CCCHHHHHHHHHHHHHHHHCCEEEECCCCCEEEEEECCCCCCCEEECHHHCCCHHHHHHH
LKKYLYNRPKLDYITFSGSGEPTLHKGIGEIISFLKDNYPEYKVALLTNSTLLYRNQVIS
HHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHH
EIKGCDLIVPSLDAVSEEIFQKINRPVSGLNAELIVKGLINLRKNYNGKMWLEIFIIPDL
HHCCCEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECC
NDNKKELMLFKEAINRIKPDKIQLNVLDRPGTENWVKRIPEERLMEIAEYLGDNVEVIT
CCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHCCHHHHHHHHHHHCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA