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The map label for this gene is ywbF [H]

Identifier: 220931916

GI number: 220931916

Start: 1167155

End: 1168291

Strand: Direct

Name: ywbF [H]

Synonym: Hore_10750

Alternate gene names: 220931916

Gene position: 1167155-1168291 (Clockwise)

Preceding gene: 220931915

Following gene: 220931917

Centisome position: 45.27

GC content: 32.01

Gene sequence:

>1137_bases
ATGAACTTTAAATTATTTAATTTTTTCTTTTATATAACAGCAGCTGCCCTTACTTATATAAATGTTTATTTTAAAAAAAT
TGGGTTTACTACAGGACAAATTGGTCTTATACAATCTGTTCCTGCAGCAATTTCATTACTCGTAATGCCATTATGGGGTA
TGGCTTCTGATTATTTTAATTCAAATAAGCGACTACTTATTTATGCCATTACCGGGACAATAATTTTAAATCTGGTTTTT
TTAACAACTGAATACTACTGGTATATATTTATTATAATGGTATTTTTTGTTATATTTCAGAAACCTGTTATTCCTCTGGC
TGATGCACTATTATTAAACTATCTCGGTAAAAGGGGGAATTTATACGGGCGGTACCGGGTATGGGGTTCTATTGGATTTA
CCATAACTGTCTGGTTAATTGGATATTACCTTGAAAACACAAATCCAGCAAACCTTTTTTATATAAATGCTGTGGCTCTC
CTGGTAGCATTATTATTTATTTTAAAAGTACCGGAAGGCAAAGAGGCAATCAGGGTAAACAGATTGAAAGAATTTACAGG
TCTTTTGAAAAACATGGATTTATTTTACTTCCTTCTTTTTACTTTTTTTATCCAGCTGACACTCTTTTCCAATTATACAT
TTTTTCCACTCTACGTGCTCGATAATGGAAGCAGGGAATCCCTTATTGGCCTTGCTTTAACTGTTGGGGCTACCAGTGAG
ATGTTTATCTTTGTTTATTCAGATAATATCTTCAGGAAATTTAAAATTAAATCTATTTTTATGATATCTTCCATAGCCTT
TACCCTAAGGTGGTTTTTACTGGCCTATTTTCCGGTATCATCTGTTTTCATAGGTTCCCAACTTTTGCACAGTTTAACCT
TTGGCTTATTCCATGTTACAGCAGTAAATTATATAAATATTATATGTGGAGAAGACTTTAAGGCGACCGGCCAGAATTTA
TATGCTACAATGCTGGGAATAAGTAGTATTGTCGGTAATTATCTCGGTGGTAATATATATGAAAATATGGGTGGCAATAA
GCTCTACTTTTACTGGGCTTTGATAACTTTAATATCAGGGTTAATTTATTATATAAATCTGTCCCTTAATAAAAATAAAA
CATATCTAGTAAACTAA

Upstream 100 bases:

>100_bases
TTTAAAGTTCTTGACATAATAAGTTATGTAGTAATATTATTAATAACAGAGATAATACAAGATTCAATAATATAACATGT
AAGAAACGGGGTATGATACC

Downstream 100 bases:

>100_bases
TTATAATCAGACTTTTTTATAATTGGTCACAAAACCGGTCTTATAAATTTTCTATTATATGGGGCTTGAAAATTTGGTTA
TAACAGGAATTTAGATAGGA

Product: major facilitator superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MNFKLFNFFFYITAAALTYINVYFKKIGFTTGQIGLIQSVPAAISLLVMPLWGMASDYFNSNKRLLIYAITGTIILNLVF
LTTEYYWYIFIIMVFFVIFQKPVIPLADALLLNYLGKRGNLYGRYRVWGSIGFTITVWLIGYYLENTNPANLFYINAVAL
LVALLFILKVPEGKEAIRVNRLKEFTGLLKNMDLFYFLLFTFFIQLTLFSNYTFFPLYVLDNGSRESLIGLALTVGATSE
MFIFVYSDNIFRKFKIKSIFMISSIAFTLRWFLLAYFPVSSVFIGSQLLHSLTFGLFHVTAVNYINIICGEDFKATGQNL
YATMLGISSIVGNYLGGNIYENMGGNKLYFYWALITLISGLIYYINLSLNKNKTYLVN

Sequences:

>Translated_378_residues
MNFKLFNFFFYITAAALTYINVYFKKIGFTTGQIGLIQSVPAAISLLVMPLWGMASDYFNSNKRLLIYAITGTIILNLVF
LTTEYYWYIFIIMVFFVIFQKPVIPLADALLLNYLGKRGNLYGRYRVWGSIGFTITVWLIGYYLENTNPANLFYINAVAL
LVALLFILKVPEGKEAIRVNRLKEFTGLLKNMDLFYFLLFTFFIQLTLFSNYTFFPLYVLDNGSRESLIGLALTVGATSE
MFIFVYSDNIFRKFKIKSIFMISSIAFTLRWFLLAYFPVSSVFIGSQLLHSLTFGLFHVTAVNYINIICGEDFKATGQNL
YATMLGISSIVGNYLGGNIYENMGGNKLYFYWALITLISGLIYYINLSLNKNKTYLVN
>Mature_378_residues
MNFKLFNFFFYITAAALTYINVYFKKIGFTTGQIGLIQSVPAAISLLVMPLWGMASDYFNSNKRLLIYAITGTIILNLVF
LTTEYYWYIFIIMVFFVIFQKPVIPLADALLLNYLGKRGNLYGRYRVWGSIGFTITVWLIGYYLENTNPANLFYINAVAL
LVALLFILKVPEGKEAIRVNRLKEFTGLLKNMDLFYFLLFTFFIQLTLFSNYTFFPLYVLDNGSRESLIGLALTVGATSE
MFIFVYSDNIFRKFKIKSIFMISSIAFTLRWFLLAYFPVSSVFIGSQLLHSLTFGLFHVTAVNYINIICGEDFKATGQNL
YATMLGISSIVGNYLGGNIYENMGGNKLYFYWALITLISGLIYYINLSLNKNKTYLVN

Specific function: Probable Permease Involved In The Uptake Of 3- Phenylpropionic Acid. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lacY/rafB permease family. HcaT subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788886, Length=357, Percent_Identity=24.9299719887955, Blast_Score=86, Evalue=6e-18,
Organism=Escherichia coli, GI1788415, Length=342, Percent_Identity=23.0994152046784, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR016196 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43324; Mature: 43324

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFKLFNFFFYITAAALTYINVYFKKIGFTTGQIGLIQSVPAAISLLVMPLWGMASDYFN
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
SNKRLLIYAITGTIILNLVFLTTEYYWYIFIIMVFFVIFQKPVIPLADALLLNYLGKRGN
CCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
LYGRYRVWGSIGFTITVWLIGYYLENTNPANLFYINAVALLVALLFILKVPEGKEAIRVN
CEEEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCHHHHHH
RLKEFTGLLKNMDLFYFLLFTFFIQLTLFSNYTFFPLYVLDNGSRESLIGLALTVGATSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHEEEEEEECCCCE
MFIFVYSDNIFRKFKIKSIFMISSIAFTLRWFLLAYFPVSSVFIGSQLLHSLTFGLFHVT
EEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVNYINIICGEDFKATGQNLYATMLGISSIVGNYLGGNIYENMGGNKLYFYWALITLISG
HHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEHHHHHHHHHHHH
LIYYINLSLNKNKTYLVN
HHEEEEEEECCCCEEEEC
>Mature Secondary Structure
MNFKLFNFFFYITAAALTYINVYFKKIGFTTGQIGLIQSVPAAISLLVMPLWGMASDYFN
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
SNKRLLIYAITGTIILNLVFLTTEYYWYIFIIMVFFVIFQKPVIPLADALLLNYLGKRGN
CCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
LYGRYRVWGSIGFTITVWLIGYYLENTNPANLFYINAVALLVALLFILKVPEGKEAIRVN
CEEEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCHHHHHH
RLKEFTGLLKNMDLFYFLLFTFFIQLTLFSNYTFFPLYVLDNGSRESLIGLALTVGATSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHEEEEEEECCCCE
MFIFVYSDNIFRKFKIKSIFMISSIAFTLRWFLLAYFPVSSVFIGSQLLHSLTFGLFHVT
EEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVNYINIICGEDFKATGQNLYATMLGISSIVGNYLGGNIYENMGGNKLYFYWALITLISG
HHHHEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEHHHHHHHHHHHH
LIYYINLSLNKNKTYLVN
HHEEEEEEECCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]