Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
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Accession | NC_011899 |
Length | 2,578,146 |
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The map label for this gene is 220931908
Identifier: 220931908
GI number: 220931908
Start: 1154217
End: 1156310
Strand: Direct
Name: 220931908
Synonym: Hore_10660
Alternate gene names: NA
Gene position: 1154217-1156310 (Clockwise)
Preceding gene: 220931907
Following gene: 220931909
Centisome position: 44.77
GC content: 29.66
Gene sequence:
>2094_bases ATGGCATCAACTTTCAATGCTTATAAAAAGCAAAGTGAAGCAGGTACTTATGAAAACCGATTGCTTAAGGTGTGTTTAAA ACTATTTAATATTAATCATTATATTAATGGAAAAGGATTTATTGAATTAAACTGGAAGTCAACAAAAAGAAAGGGTTTAA TTTTTTTTAGGGAAGATATTGAAAAAACCCCTGAAATAGACCCTGCTGAATCTGAAATTGATTTTATTGTCACTGTATTA CTTCCCGGTGCTAAAATTGATTATAATAATGTTAAAATATCCTGCAAAGACCAGAGAATAATAACCTGGATCCCGGTTGA AGTAAGTGAAAAAGAATTAGTGTTTATTTTGGATGAATCTGAAAACGAGTTGAAAACAAAAAAATTACTTAAGCAGTTAT ACCTTAAAGGAGTAATTAAAAATTATAAACATGAATATAAAGATTTTAATAAGAATACATGTCATGGTATTTTGGAAGAA GTAGTGAAAGATGTTCTTGATAAAACCTATTATAGACATCCACCGGGGTCAAAGATGGCTTTTGAAGATATGATTTACAG TGAAATTAAAGAGGTTTTTGAAGAATATAAAATTTTTGATGATTTTTATGAAGAGTTGAAAAAAGGTAATTTACATTCAA TAGATAGGGAGGTTTATCCCTTTTTCAGGGATAAACCTTATGGCATCCCACGTAAAGCAATTAATTATATGATATTAGCT GCCCATGACCGGGGTTTTTGCAGGCTTTATAAAAAAAACGGCCAGATTATTGTCTTAAATAACTACAAAGATAATGTGGA AGAAAACCTGGCCAGAATTAAATCTAAAGATATAGAATTTGTAGGAAAAGGAGAAACCGTTGCTGAAAGAGATTGGAAAG AATGCCAGCTTATATTAAAAGAGTTTGGATACAGTATTACGGGGAATCTTACTTTAAAAAAACAGGATAAATGCTGGGAA ATGCTGGTTAATATCCAGAATAATATGAAAGAGGAACTTGAGCATGCCATCAGAATTAATTCTGAACTTTGTTACCTTCT AGAAGAAGCAAAACAGGTTAAAGAAATAAATAAACCTCTATTTAAACTAAATCATGTGATGGAACAGGATTTTTACAGGT TGGATAATGATTCTTATGATGGAATAAAAAAATTTATAAATCTGTTGTATTCTACATACGGCAATGTAAATAGCTTTAAA AAAGAACTAAAAGAGGTAAAAGAGCTTCTTTATTTTGTTCGTATGAAAAATAACAGGGTTCTGGCTGAAGAATACTATTA TTTAAAAAAAATATCATTACCATTACGTGGGTATGAAGATTTAAGGATGGCCCTTATAACCCTTTTAAAAAAAATATCAA ATTTGAAAGTGATGGTAAGTAACCAGGAAAACTTTAAATCATTTCTTGAAGAATTAAGTCAGTTTAAAGATAGATATAAA AAACAGTATTTGAAAGAACACTTGAAATATCAAAGAGAACTGGTTAGTTTTACTGAGAAGTTACGCTCATTAAAAGAATA TGAAGCCCTGAGGTTATTATCCGGTATAAAGGTTATCAGGGTTGCCTATAATATTAAACCAATTAAAAAATATATTGATA CTTTTTTTCCAGGTAAATGTCAGGTCGATAACCTGGATCAGCTCTTAGATAAACAGCCCCGGTGTAATTGTGGTTTTTCC CTGGGGGAGGTTTCGACAATTCCCTCTTTGCAAAAAATTAAACCAATGCTTTTAAAAGGAGTTAAAGAATATATTAAGAA GTTACATACTCCTAAATTTAAATCATTAATTCAAGATTATATTCAGAAAAAACCGGATTCACTTTTAAATACATTTAATA AATGTGAAAAATTATATGACAAAATAGAATTAATAAATCCAACCCTTATCAAAGAAATTAATAAAGCTCTGAACTGTACT TATACAATTAAGGTTTCATGGCAGGACCTTGGTGAATCTCTGAAGGGCTCCTATCCCGCTAGCAATTTAGATACTGTTAA GGATAAATTGGAAGAAAGAGTAATTGAAATCTTAAAACAGAAAGAAAGCTCAAATGACCTTAATTTAGATAATATAATTA TAAATTTAATCTAA
Upstream 100 bases:
>100_bases TACCCCCGACAAAGGTAGACATTATCTTTAAAGGAAAAAAATATAAATTATAGAAATATATTATGTAAACAGGGATACGT ACCTGAATAGGGGGGATATA
Downstream 100 bases:
>100_bases TAAAAAGGAATTTAATATTTAAATAGTGAATTTATTAGTAGAGAGTATAAAAAGGAGGTAAATACTGGTGAAAATATTAA TAAAAAATGTTGATGTTATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 697; Mature: 696
Protein sequence:
>697_residues MASTFNAYKKQSEAGTYENRLLKVCLKLFNINHYINGKGFIELNWKSTKRKGLIFFREDIEKTPEIDPAESEIDFIVTVL LPGAKIDYNNVKISCKDQRIITWIPVEVSEKELVFILDESENELKTKKLLKQLYLKGVIKNYKHEYKDFNKNTCHGILEE VVKDVLDKTYYRHPPGSKMAFEDMIYSEIKEVFEEYKIFDDFYEELKKGNLHSIDREVYPFFRDKPYGIPRKAINYMILA AHDRGFCRLYKKNGQIIVLNNYKDNVEENLARIKSKDIEFVGKGETVAERDWKECQLILKEFGYSITGNLTLKKQDKCWE MLVNIQNNMKEELEHAIRINSELCYLLEEAKQVKEINKPLFKLNHVMEQDFYRLDNDSYDGIKKFINLLYSTYGNVNSFK KELKEVKELLYFVRMKNNRVLAEEYYYLKKISLPLRGYEDLRMALITLLKKISNLKVMVSNQENFKSFLEELSQFKDRYK KQYLKEHLKYQRELVSFTEKLRSLKEYEALRLLSGIKVIRVAYNIKPIKKYIDTFFPGKCQVDNLDQLLDKQPRCNCGFS LGEVSTIPSLQKIKPMLLKGVKEYIKKLHTPKFKSLIQDYIQKKPDSLLNTFNKCEKLYDKIELINPTLIKEINKALNCT YTIKVSWQDLGESLKGSYPASNLDTVKDKLEERVIEILKQKESSNDLNLDNIIINLI
Sequences:
>Translated_697_residues MASTFNAYKKQSEAGTYENRLLKVCLKLFNINHYINGKGFIELNWKSTKRKGLIFFREDIEKTPEIDPAESEIDFIVTVL LPGAKIDYNNVKISCKDQRIITWIPVEVSEKELVFILDESENELKTKKLLKQLYLKGVIKNYKHEYKDFNKNTCHGILEE VVKDVLDKTYYRHPPGSKMAFEDMIYSEIKEVFEEYKIFDDFYEELKKGNLHSIDREVYPFFRDKPYGIPRKAINYMILA AHDRGFCRLYKKNGQIIVLNNYKDNVEENLARIKSKDIEFVGKGETVAERDWKECQLILKEFGYSITGNLTLKKQDKCWE MLVNIQNNMKEELEHAIRINSELCYLLEEAKQVKEINKPLFKLNHVMEQDFYRLDNDSYDGIKKFINLLYSTYGNVNSFK KELKEVKELLYFVRMKNNRVLAEEYYYLKKISLPLRGYEDLRMALITLLKKISNLKVMVSNQENFKSFLEELSQFKDRYK KQYLKEHLKYQRELVSFTEKLRSLKEYEALRLLSGIKVIRVAYNIKPIKKYIDTFFPGKCQVDNLDQLLDKQPRCNCGFS LGEVSTIPSLQKIKPMLLKGVKEYIKKLHTPKFKSLIQDYIQKKPDSLLNTFNKCEKLYDKIELINPTLIKEINKALNCT YTIKVSWQDLGESLKGSYPASNLDTVKDKLEERVIEILKQKESSNDLNLDNIIINLI >Mature_696_residues ASTFNAYKKQSEAGTYENRLLKVCLKLFNINHYINGKGFIELNWKSTKRKGLIFFREDIEKTPEIDPAESEIDFIVTVLL PGAKIDYNNVKISCKDQRIITWIPVEVSEKELVFILDESENELKTKKLLKQLYLKGVIKNYKHEYKDFNKNTCHGILEEV VKDVLDKTYYRHPPGSKMAFEDMIYSEIKEVFEEYKIFDDFYEELKKGNLHSIDREVYPFFRDKPYGIPRKAINYMILAA HDRGFCRLYKKNGQIIVLNNYKDNVEENLARIKSKDIEFVGKGETVAERDWKECQLILKEFGYSITGNLTLKKQDKCWEM LVNIQNNMKEELEHAIRINSELCYLLEEAKQVKEINKPLFKLNHVMEQDFYRLDNDSYDGIKKFINLLYSTYGNVNSFKK ELKEVKELLYFVRMKNNRVLAEEYYYLKKISLPLRGYEDLRMALITLLKKISNLKVMVSNQENFKSFLEELSQFKDRYKK QYLKEHLKYQRELVSFTEKLRSLKEYEALRLLSGIKVIRVAYNIKPIKKYIDTFFPGKCQVDNLDQLLDKQPRCNCGFSL GEVSTIPSLQKIKPMLLKGVKEYIKKLHTPKFKSLIQDYIQKKPDSLLNTFNKCEKLYDKIELINPTLIKEINKALNCTY TIKVSWQDLGESLKGSYPASNLDTVKDKLEERVIEILKQKESSNDLNLDNIIINLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82275; Mature: 82143
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASTFNAYKKQSEAGTYENRLLKVCLKLFNINHYINGKGFIELNWKSTKRKGLIFFREDI CCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEECCCEEEEEECCCCCCCCEEEEHHHH EKTPEIDPAESEIDFIVTVLLPGAKIDYNNVKISCKDQRIITWIPVEVSEKELVFILDES CCCCCCCCCCCHHHEEEEEEECCCEEECCCEEEEECCCEEEEEEECEECCCCEEEEECCC ENELKTKKLLKQLYLKGVIKNYKHEYKDFNKNTCHGILEEVVKDVLDKTYYRHPPGSKMA CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHH FEDMIYSEIKEVFEEYKIFDDFYEELKKGNLHSIDREVYPFFRDKPYGIPRKAINYMILA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCHHHHCEEEEE AHDRGFCRLYKKNGQIIVLNNYKDNVEENLARIKSKDIEFVGKGETVAERDWKECQLILK ECCCCCEEEEECCCCEEEECCCCCCHHHHHHHHHHCCCCEEECCCCHHHCCHHHHHHHHH EFGYSITGNLTLKKQDKCWEMLVNIQNNMKEELEHAIRINSELCYLLEEAKQVKEINKPL HCCCCEECCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH FKLNHVMEQDFYRLDNDSYDGIKKFINLLYSTYGNVNSFKKELKEVKELLYFVRMKNNRV HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEE LAEEYYYLKKISLPLRGYEDLRMALITLLKKISNLKVMVSNQENFKSFLEELSQFKDRYK EHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHH KQYLKEHLKYQRELVSFTEKLRSLKEYEALRLLSGIKVIRVAYNIKPIKKYIDTFFPGKC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCC QVDNLDQLLDKQPRCNCGFSLGEVSTIPSLQKIKPMLLKGVKEYIKKLHTPKFKSLIQDY CCCCHHHHHCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH IQKKPDSLLNTFNKCEKLYDKIELINPTLIKEINKALNCTYTIKVSWQDLGESLKGSYPA HHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEEEEHHHHHHHHCCCCCC SNLDTVKDKLEERVIEILKQKESSNDLNLDNIIINLI CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEEEC >Mature Secondary Structure ASTFNAYKKQSEAGTYENRLLKVCLKLFNINHYINGKGFIELNWKSTKRKGLIFFREDI CCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEECCCEEEEEECCCCCCCCEEEEHHHH EKTPEIDPAESEIDFIVTVLLPGAKIDYNNVKISCKDQRIITWIPVEVSEKELVFILDES CCCCCCCCCCCHHHEEEEEEECCCEEECCCEEEEECCCEEEEEEECEECCCCEEEEECCC ENELKTKKLLKQLYLKGVIKNYKHEYKDFNKNTCHGILEEVVKDVLDKTYYRHPPGSKMA CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHH FEDMIYSEIKEVFEEYKIFDDFYEELKKGNLHSIDREVYPFFRDKPYGIPRKAINYMILA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCHHHHCEEEEE AHDRGFCRLYKKNGQIIVLNNYKDNVEENLARIKSKDIEFVGKGETVAERDWKECQLILK ECCCCCEEEEECCCCEEEECCCCCCHHHHHHHHHHCCCCEEECCCCHHHCCHHHHHHHHH EFGYSITGNLTLKKQDKCWEMLVNIQNNMKEELEHAIRINSELCYLLEEAKQVKEINKPL HCCCCEECCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH FKLNHVMEQDFYRLDNDSYDGIKKFINLLYSTYGNVNSFKKELKEVKELLYFVRMKNNRV HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCEE LAEEYYYLKKISLPLRGYEDLRMALITLLKKISNLKVMVSNQENFKSFLEELSQFKDRYK EHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHH KQYLKEHLKYQRELVSFTEKLRSLKEYEALRLLSGIKVIRVAYNIKPIKKYIDTFFPGKC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCC QVDNLDQLLDKQPRCNCGFSLGEVSTIPSLQKIKPMLLKGVKEYIKKLHTPKFKSLIQDY CCCCHHHHHCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH IQKKPDSLLNTFNKCEKLYDKIELINPTLIKEINKALNCTYTIKVSWQDLGESLKGSYPA HHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEEEEEHHHHHHHHCCCCCC SNLDTVKDKLEERVIEILKQKESSNDLNLDNIIINLI CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA