Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
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Accession | NC_011899 |
Length | 2,578,146 |
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The map label for this gene is 220931345
Identifier: 220931345
GI number: 220931345
Start: 543749
End: 544492
Strand: Reverse
Name: 220931345
Synonym: Hore_05000
Alternate gene names: NA
Gene position: 544492-543749 (Counterclockwise)
Preceding gene: 220931346
Following gene: 220931344
Centisome position: 21.12
GC content: 35.48
Gene sequence:
>744_bases GTGGTTATTTACCTTTATGATGGTTCCTTTGAGGGCTTAATGACAGCAATTAATCATGCCCTTGAAAATAATATTGAACC GGACCGGATTGTCAGAAAAAACTCTTATAACAATAGTTTATTTTCTAAACCTGTTTATATTAAAACAGATCAGGAATTAT CCCTTAAGCTATCTACAGAACTTAAAATCAGACTGGGACAACGGGCTTTAAAAGAGATTTATTACAGCTTTCTATCTGAA AAACCCAATGTTGAAAAAAATATATACCACTATATTAAACTTGGTCTTGTTAAAGGGAAGGATATTCATAATGTCCTGAC TGATGAGTGGGTATTGGAAGTAAAAAAAATGGCCAGAAAGGTAAGCAGAGAATCACATCGTATGCTTGGTTTAATCAGGT TTAGAAACCTCCCAGAAGATATATATTATGCCCCCATCAAACCCGATTTTAATATACTGACTATTCTTGCTCCCCACTTT GCCCGGAGGCTTCCGTCCCAGAAATGGGTTATTCATGATAAAAAAAGGGAACTGGCCGCTATTTATAATAAAACAGAATG GTTAATCGGGGATCTTTCTTCTGACCTTAAAATTCAACCAGATAACGAAGAACTTGCCTTTCAAAAGATGTGGCAGGAGT ACTTTAAAAGTGTTGCTATACCCAACAGGAAAAATAAAAAACTTCAGAGACAATTTATGCCTAAAAAATACCGGGAATAT CTCATTGAGAATCCTGAGAGCTAA
Upstream 100 bases:
>100_bases ATCTCTTATTGATTTCGATATATACTTTCAGTTTACTACAAATCAAAACTCCCTTTGACTATTTAAAGTATTTTTTTAAA CTGATAAAGGAGGATGCCCG
Downstream 100 bases:
>100_bases TATATCGTCTTATATATATATTTTCGCAACTGGTTTTTCTGATTTGAAAACTGCACAGTAACTTCCGTATCCCTGTCCTT CAGTTTATTATAAAAAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MVIYLYDGSFEGLMTAINHALENNIEPDRIVRKNSYNNSLFSKPVYIKTDQELSLKLSTELKIRLGQRALKEIYYSFLSE KPNVEKNIYHYIKLGLVKGKDIHNVLTDEWVLEVKKMARKVSRESHRMLGLIRFRNLPEDIYYAPIKPDFNILTILAPHF ARRLPSQKWVIHDKKRELAAIYNKTEWLIGDLSSDLKIQPDNEELAFQKMWQEYFKSVAIPNRKNKKLQRQFMPKKYREY LIENPES
Sequences:
>Translated_247_residues MVIYLYDGSFEGLMTAINHALENNIEPDRIVRKNSYNNSLFSKPVYIKTDQELSLKLSTELKIRLGQRALKEIYYSFLSE KPNVEKNIYHYIKLGLVKGKDIHNVLTDEWVLEVKKMARKVSRESHRMLGLIRFRNLPEDIYYAPIKPDFNILTILAPHF ARRLPSQKWVIHDKKRELAAIYNKTEWLIGDLSSDLKIQPDNEELAFQKMWQEYFKSVAIPNRKNKKLQRQFMPKKYREY LIENPES >Mature_247_residues MVIYLYDGSFEGLMTAINHALENNIEPDRIVRKNSYNNSLFSKPVYIKTDQELSLKLSTELKIRLGQRALKEIYYSFLSE KPNVEKNIYHYIKLGLVKGKDIHNVLTDEWVLEVKKMARKVSRESHRMLGLIRFRNLPEDIYYAPIKPDFNILTILAPHF ARRLPSQKWVIHDKKRELAAIYNKTEWLIGDLSSDLKIQPDNEELAFQKMWQEYFKSVAIPNRKNKKLQRQFMPKKYREY LIENPES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29380; Mature: 29380
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIYLYDGSFEGLMTAINHALENNIEPDRIVRKNSYNNSLFSKPVYIKTDQELSLKLSTE CEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCEEEECCCCEEEEECCH LKIRLGQRALKEIYYSFLSEKPNVEKNIYHYIKLGLVKGKDIHNVLTDEWVLEVKKMARK HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH VSRESHRMLGLIRFRNLPEDIYYAPIKPDFNILTILAPHFARRLPSQKWVIHDKKRELAA HHHHHHHHHHHHHHCCCCHHHEECCCCCCCCEEEHHHHHHHHHCCCCCCEEECHHHHHHH IYNKTEWLIGDLSSDLKIQPDNEELAFQKMWQEYFKSVAIPNRKNKKLQRQFMPKKYREY HHCCHHHEEECCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHH LIENPES HHCCCCC >Mature Secondary Structure MVIYLYDGSFEGLMTAINHALENNIEPDRIVRKNSYNNSLFSKPVYIKTDQELSLKLSTE CEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCEEEECCCCEEEEECCH LKIRLGQRALKEIYYSFLSEKPNVEKNIYHYIKLGLVKGKDIHNVLTDEWVLEVKKMARK HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH VSRESHRMLGLIRFRNLPEDIYYAPIKPDFNILTILAPHFARRLPSQKWVIHDKKRELAA HHHHHHHHHHHHHHCCCCHHHEECCCCCCCCEEEHHHHHHHHHCCCCCCEEECHHHHHHH IYNKTEWLIGDLSSDLKIQPDNEELAFQKMWQEYFKSVAIPNRKNKKLQRQFMPKKYREY HHCCHHHEEECCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHH LIENPES HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA