Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

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The map label for this gene is 220931345

Identifier: 220931345

GI number: 220931345

Start: 543749

End: 544492

Strand: Reverse

Name: 220931345

Synonym: Hore_05000

Alternate gene names: NA

Gene position: 544492-543749 (Counterclockwise)

Preceding gene: 220931346

Following gene: 220931344

Centisome position: 21.12

GC content: 35.48

Gene sequence:

>744_bases
GTGGTTATTTACCTTTATGATGGTTCCTTTGAGGGCTTAATGACAGCAATTAATCATGCCCTTGAAAATAATATTGAACC
GGACCGGATTGTCAGAAAAAACTCTTATAACAATAGTTTATTTTCTAAACCTGTTTATATTAAAACAGATCAGGAATTAT
CCCTTAAGCTATCTACAGAACTTAAAATCAGACTGGGACAACGGGCTTTAAAAGAGATTTATTACAGCTTTCTATCTGAA
AAACCCAATGTTGAAAAAAATATATACCACTATATTAAACTTGGTCTTGTTAAAGGGAAGGATATTCATAATGTCCTGAC
TGATGAGTGGGTATTGGAAGTAAAAAAAATGGCCAGAAAGGTAAGCAGAGAATCACATCGTATGCTTGGTTTAATCAGGT
TTAGAAACCTCCCAGAAGATATATATTATGCCCCCATCAAACCCGATTTTAATATACTGACTATTCTTGCTCCCCACTTT
GCCCGGAGGCTTCCGTCCCAGAAATGGGTTATTCATGATAAAAAAAGGGAACTGGCCGCTATTTATAATAAAACAGAATG
GTTAATCGGGGATCTTTCTTCTGACCTTAAAATTCAACCAGATAACGAAGAACTTGCCTTTCAAAAGATGTGGCAGGAGT
ACTTTAAAAGTGTTGCTATACCCAACAGGAAAAATAAAAAACTTCAGAGACAATTTATGCCTAAAAAATACCGGGAATAT
CTCATTGAGAATCCTGAGAGCTAA

Upstream 100 bases:

>100_bases
ATCTCTTATTGATTTCGATATATACTTTCAGTTTACTACAAATCAAAACTCCCTTTGACTATTTAAAGTATTTTTTTAAA
CTGATAAAGGAGGATGCCCG

Downstream 100 bases:

>100_bases
TATATCGTCTTATATATATATTTTCGCAACTGGTTTTTCTGATTTGAAAACTGCACAGTAACTTCCGTATCCCTGTCCTT
CAGTTTATTATAAAAAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MVIYLYDGSFEGLMTAINHALENNIEPDRIVRKNSYNNSLFSKPVYIKTDQELSLKLSTELKIRLGQRALKEIYYSFLSE
KPNVEKNIYHYIKLGLVKGKDIHNVLTDEWVLEVKKMARKVSRESHRMLGLIRFRNLPEDIYYAPIKPDFNILTILAPHF
ARRLPSQKWVIHDKKRELAAIYNKTEWLIGDLSSDLKIQPDNEELAFQKMWQEYFKSVAIPNRKNKKLQRQFMPKKYREY
LIENPES

Sequences:

>Translated_247_residues
MVIYLYDGSFEGLMTAINHALENNIEPDRIVRKNSYNNSLFSKPVYIKTDQELSLKLSTELKIRLGQRALKEIYYSFLSE
KPNVEKNIYHYIKLGLVKGKDIHNVLTDEWVLEVKKMARKVSRESHRMLGLIRFRNLPEDIYYAPIKPDFNILTILAPHF
ARRLPSQKWVIHDKKRELAAIYNKTEWLIGDLSSDLKIQPDNEELAFQKMWQEYFKSVAIPNRKNKKLQRQFMPKKYREY
LIENPES
>Mature_247_residues
MVIYLYDGSFEGLMTAINHALENNIEPDRIVRKNSYNNSLFSKPVYIKTDQELSLKLSTELKIRLGQRALKEIYYSFLSE
KPNVEKNIYHYIKLGLVKGKDIHNVLTDEWVLEVKKMARKVSRESHRMLGLIRFRNLPEDIYYAPIKPDFNILTILAPHF
ARRLPSQKWVIHDKKRELAAIYNKTEWLIGDLSSDLKIQPDNEELAFQKMWQEYFKSVAIPNRKNKKLQRQFMPKKYREY
LIENPES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29380; Mature: 29380

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIYLYDGSFEGLMTAINHALENNIEPDRIVRKNSYNNSLFSKPVYIKTDQELSLKLSTE
CEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCEEEECCCCEEEEECCH
LKIRLGQRALKEIYYSFLSEKPNVEKNIYHYIKLGLVKGKDIHNVLTDEWVLEVKKMARK
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
VSRESHRMLGLIRFRNLPEDIYYAPIKPDFNILTILAPHFARRLPSQKWVIHDKKRELAA
HHHHHHHHHHHHHHCCCCHHHEECCCCCCCCEEEHHHHHHHHHCCCCCCEEECHHHHHHH
IYNKTEWLIGDLSSDLKIQPDNEELAFQKMWQEYFKSVAIPNRKNKKLQRQFMPKKYREY
HHCCHHHEEECCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHH
LIENPES
HHCCCCC
>Mature Secondary Structure
MVIYLYDGSFEGLMTAINHALENNIEPDRIVRKNSYNNSLFSKPVYIKTDQELSLKLSTE
CEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCEEEECCCCEEEEECCH
LKIRLGQRALKEIYYSFLSEKPNVEKNIYHYIKLGLVKGKDIHNVLTDEWVLEVKKMARK
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
VSRESHRMLGLIRFRNLPEDIYYAPIKPDFNILTILAPHFARRLPSQKWVIHDKKRELAA
HHHHHHHHHHHHHHCCCCHHHEECCCCCCCCEEEHHHHHHHHHCCCCCCEEECHHHHHHH
IYNKTEWLIGDLSSDLKIQPDNEELAFQKMWQEYFKSVAIPNRKNKKLQRQFMPKKYREY
HHCCHHHEEECCCCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHH
LIENPES
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA