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The map label for this gene is 220931346

Identifier: 220931346

GI number: 220931346

Start: 544592

End: 545839

Strand: Reverse

Name: 220931346

Synonym: Hore_05010

Alternate gene names: NA

Gene position: 545839-544592 (Counterclockwise)

Preceding gene: 220931354

Following gene: 220931345

Centisome position: 21.17

GC content: 40.22

Gene sequence:

>1248_bases
ATGGAAATTTTGCAAAAAATTAAAATTCTATCAGCAGCTGCCAGATACGATGTCTCCTGTTCTTCAAGTGGTAGCAGGAG
AAGAAACTCTCCTGACGGCATGGGAAATACTGCCTCAGGTGGAATCTGTCATAGCTGGTCAGATGACGGACGCTGCATCT
CCCTTCTCAAAATATTATTCACCAATTACTGTATCTATGATTGTGCTTACTGTATAAACAGGATTTCAAATGACATACCC
CGGGCCTCATTTACACCTGAAGAAGTGGCCAGAATCACTGTAAATTTTTATAAACGAAATTACATTGAAGGCCTGTTTTT
AAGTTCTGCTGTTCATAAAAACCCTGATTACACTATGGAAAGACTGGTTAAAACAGCCAGACTTTTAAGGAAAGATTATA
AATTTAATGGATACATTCATCTCAAGGCTATTCCCGGTGCTGATCTACAATTAATCAACGAAGCCGGTCACTATGCTGAT
AGATTAAGTGTCAATATAGAATTACCAACCCGGAAAACCCTTAAGAAATTAGCCCCACAGAAAAAAGTTGAAAATATTGT
CACCCCCATGAAGTTTATTGGAAAAAATATCAAAACCAACAAATATGAAAGAAAAAAGTTCAGAAATGCCCCCTCCTTTG
TCCCGGCGGGTCAAAGTACTCAGCTGATAGTAGGGGCCAGTCCTGAACCAGATTACACTATATTAAAACTATCTGAAAAT
CTTTATAAAAAATATTACTTAAAAAGAGTCTACTACTCTGCCTATATTCCAGTAGCTAAACATCCCCGGCTTCCGGCCCT
TAAGAAACCACCTTTACTGAGGGAGCACCGCCTGTATCAGGCTGACTGGCTAATCCGTTTTTATGGTTTTACCTCCAGGG
AATTACTGACACCGGAAAAACCAAATCTTGATACCAGGTTTGACCCTAAAGTAAACTGGGCCCTGAATCATTTCTATCTC
TTTCCGGTTGAGATCAATACTGCCCCCTACGAAACTCTCCTGCGGGTGCCTGGAATTGGCCTTAAATCAGCCCGGAGAAT
TGTTAAGGCAAGAAAGGAAGCCCACCTGAACTACTTTAATCTATCTAAACTTGGAGTAGTCCTCAAACGGGCCCGCTTTT
TTATAACATGTAAGGGTAAATATTACGGAGGTATTCCTTTTGAGAAGGACTTAATAATGGACAGACTTTCAGGTAATGAT
TTATCCAGTACTTCCGTGCAGCTATCTCTTTTTACCTCTGGCCCATAA

Upstream 100 bases:

>100_bases
ACAATATATAAATGATACTAACTGATTGAATATGACTGATAATTAACTAATTGCTACCTAAACAAATGTATGTTATAATT
AGCTTTGATGGGGTGGTTAT

Downstream 100 bases:

>100_bases
TCTCTTATTGATTTCGATATATACTTTCAGTTTACTACAAATCAAAACTCCCTTTGACTATTTAAAGTATTTTTTTAAAC
TGATAAAGGAGGATGCCCGG

Product: Radical SAM domain-containing protein

Products: NA

Alternate protein names: Radical SAM Domain Protein; Radical SAM Family Protein; Elongator /MiaB/NifB; Radical Sam Domain Protein; Radical SAM; Radical SAM Superfamily Protein; Biotin Synthase Related Domain-Containing Protein; Biotin Synthase Related Domain Containing Protein; Elongator Protein; Radical SAM Methylase Protein; Helix-Hairpin-Helix Motif; Radical SAM Protein

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MEILQKIKILSAAARYDVSCSSSGSRRRNSPDGMGNTASGGICHSWSDDGRCISLLKILFTNYCIYDCAYCINRISNDIP
RASFTPEEVARITVNFYKRNYIEGLFLSSAVHKNPDYTMERLVKTARLLRKDYKFNGYIHLKAIPGADLQLINEAGHYAD
RLSVNIELPTRKTLKKLAPQKKVENIVTPMKFIGKNIKTNKYERKKFRNAPSFVPAGQSTQLIVGASPEPDYTILKLSEN
LYKKYYLKRVYYSAYIPVAKHPRLPALKKPPLLREHRLYQADWLIRFYGFTSRELLTPEKPNLDTRFDPKVNWALNHFYL
FPVEINTAPYETLLRVPGIGLKSARRIVKARKEAHLNYFNLSKLGVVLKRARFFITCKGKYYGGIPFEKDLIMDRLSGND
LSSTSVQLSLFTSGP

Sequences:

>Translated_415_residues
MEILQKIKILSAAARYDVSCSSSGSRRRNSPDGMGNTASGGICHSWSDDGRCISLLKILFTNYCIYDCAYCINRISNDIP
RASFTPEEVARITVNFYKRNYIEGLFLSSAVHKNPDYTMERLVKTARLLRKDYKFNGYIHLKAIPGADLQLINEAGHYAD
RLSVNIELPTRKTLKKLAPQKKVENIVTPMKFIGKNIKTNKYERKKFRNAPSFVPAGQSTQLIVGASPEPDYTILKLSEN
LYKKYYLKRVYYSAYIPVAKHPRLPALKKPPLLREHRLYQADWLIRFYGFTSRELLTPEKPNLDTRFDPKVNWALNHFYL
FPVEINTAPYETLLRVPGIGLKSARRIVKARKEAHLNYFNLSKLGVVLKRARFFITCKGKYYGGIPFEKDLIMDRLSGND
LSSTSVQLSLFTSGP
>Mature_415_residues
MEILQKIKILSAAARYDVSCSSSGSRRRNSPDGMGNTASGGICHSWSDDGRCISLLKILFTNYCIYDCAYCINRISNDIP
RASFTPEEVARITVNFYKRNYIEGLFLSSAVHKNPDYTMERLVKTARLLRKDYKFNGYIHLKAIPGADLQLINEAGHYAD
RLSVNIELPTRKTLKKLAPQKKVENIVTPMKFIGKNIKTNKYERKKFRNAPSFVPAGQSTQLIVGASPEPDYTILKLSEN
LYKKYYLKRVYYSAYIPVAKHPRLPALKKPPLLREHRLYQADWLIRFYGFTSRELLTPEKPNLDTRFDPKVNWALNHFYL
FPVEINTAPYETLLRVPGIGLKSARRIVKARKEAHLNYFNLSKLGVVLKRARFFITCKGKYYGGIPFEKDLIMDRLSGND
LSSTSVQLSLFTSGP

Specific function: Unknown

COG id: COG4277

COG function: function code R; Predicted DNA-binding protein with the Helix-hairpin-helix motif

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47505; Mature: 47505

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEILQKIKILSAAARYDVSCSSSGSRRRNSPDGMGNTASGGICHSWSDDGRCISLLKILF
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHH
TNYCIYDCAYCINRISNDIPRASFTPEEVARITVNFYKRNYIEGLFLSSAVHKNPDYTME
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
RLVKTARLLRKDYKFNGYIHLKAIPGADLQLINEAGHYADRLSVNIELPTRKTLKKLAPQ
HHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHCCCCEEEEEEEEECCCHHHHHHHCCH
KKVENIVTPMKFIGKNIKTNKYERKKFRNAPSFVPAGQSTQLIVGASPEPDYTILKLSEN
HHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEEEEHHH
LYKKYYLKRVYYSAYIPVAKHPRLPALKKPPLLREHRLYQADWLIRFYGFTSRELLTPEK
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEEECCCCCCCCCCCC
PNLDTRFDPKVNWALNHFYLFPVEINTAPYETLLRVPGIGLKSARRIVKARKEAHLNYFN
CCCCCCCCCCEEEEEEEEEEEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEC
LSKLGVVLKRARFFITCKGKYYGGIPFEKDLIMDRLSGNDLSSTSVQLSLFTSGP
HHHHHHHHHCCEEEEEECCCEECCCCCCHHHHHHHCCCCCCCCCEEEEEEEECCC
>Mature Secondary Structure
MEILQKIKILSAAARYDVSCSSSGSRRRNSPDGMGNTASGGICHSWSDDGRCISLLKILF
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHH
TNYCIYDCAYCINRISNDIPRASFTPEEVARITVNFYKRNYIEGLFLSSAVHKNPDYTME
HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
RLVKTARLLRKDYKFNGYIHLKAIPGADLQLINEAGHYADRLSVNIELPTRKTLKKLAPQ
HHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHCCCCEEEEEEEEECCCHHHHHHHCCH
KKVENIVTPMKFIGKNIKTNKYERKKFRNAPSFVPAGQSTQLIVGASPEPDYTILKLSEN
HHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEEEEHHH
LYKKYYLKRVYYSAYIPVAKHPRLPALKKPPLLREHRLYQADWLIRFYGFTSRELLTPEK
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEEECCCCCCCCCCCC
PNLDTRFDPKVNWALNHFYLFPVEINTAPYETLLRVPGIGLKSARRIVKARKEAHLNYFN
CCCCCCCCCCEEEEEEEEEEEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEC
LSKLGVVLKRARFFITCKGKYYGGIPFEKDLIMDRLSGNDLSSTSVQLSLFTSGP
HHHHHHHHHCCEEEEEECCCEECCCCCCHHHHHHHCCCCCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA