Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
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Accession | NC_011899 |
Length | 2,578,146 |
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The map label for this gene is 220931323
Identifier: 220931323
GI number: 220931323
Start: 511212
End: 512963
Strand: Reverse
Name: 220931323
Synonym: Hore_04780
Alternate gene names: NA
Gene position: 512963-511212 (Counterclockwise)
Preceding gene: 220931328
Following gene: 220931322
Centisome position: 19.9
GC content: 37.33
Gene sequence:
>1752_bases TTGAAAAAACTAAAGTTATTTAGACATGTTTTAACCAGCCTGACCCGTAGTATTAAACGCTTTCCACTACCAACGCTCTT TACAACTATCACTACTATTTTGATGATTATATTAGCAAATGAATATTTATATGATTTTGATAAAAATACTGTAAGGCTAT TTTCCCGGTTAGTTATGACCTCTTCTCTGGGGTTTCCCCTCTTTTTATGTATTAACCTCCTTTTCAGGAGATGGCAGGGG CTTAAAGCAGGCACCAGGAATCTAATCAGGTTTACAGGGGCTGTTGCCCTCATTCTTTACTTCTTCTTTTTATCAAAGGG TACCGAAACCGTAACTACATCCAGGTTTTTAGCCTTTAACCTGGCCTTATACCTGCTATTTCTGGTAATACCTTATTTCT ATAAGAGGGAAAACTTTGAATTGTATGTGGTAAAATTATTTATCAGGGTTCTGGTAACAATTATTTACTCTGTAATCCTT TATCTGGGACTCTCGGCTATTTTCTTAACCATAAATGCCCTGTTAGATATCCCTGTTTCTCATAGATTCTATTTAAATAC GTGGTTAATAACAGCAGGTATTTTTGCCCCGGTCTTCTTTCTGGGGGGAGTACCAGAACAGGGTCAAAAAATAAACCCTG ATGATTATCCCACCTTTTTTGAAATTCTTTTATTATACATAGTAATGCCCCTAATCACCATCTACACAGGAATTCTGTAC ATTTACTTTATCAAAATCTTAATAACAGCCCAGTGGCCCCGGGGTCTTGTTGCTCACCTGGTCCTCTGGTATTCTGCGCT AAGTACTGTAGTTATGTTTTTTATCCACCCTCTGCTCTACAAAAAATGGGTCAAACAGTTTATAAAGTGGTTCCCGGTAA CGAATATCCCCCTATTGATAATGATGTTTGTCTCCATCGGCAAAAGGATTAATGCTTACGGGGTTACTGAAAACAGGTAT TATGTGGTCCTTCTCGGTCTCTGGATCCTGGGGATTATGGTTTATTACATACTATCCAGTAAAAAAAGAAATATCATACT TCCCCTGTCTCTGGCTATTATTATGGTTCTGGCCGTAATCGGTCCCTGGAGTAGTTTTTCCATCTCAAGATATAGCCAGA ATAAGCGCTTTGCCGCTATCCTGTCCCGGTACCGTATGATAAGGGATAACAGAATAATTAAAACCGATAAAGTAATTTCA GAAAATGACCAGAAGGAGATTAACTCCATCATAAGTTATTTTAAAAATAACCATGATCTCGATGATCTAAATTACCTACC TGAAGGGTTTACAACAGATAATATGGAAGAGCTATTTGGCTTCTCCTATAGTGGTAATTATTACGAAAGTTATAAATATT TCTCCCATAAAACATATGAAAACAGGGAGCCTATCAGGGTCAGCGGTTATGATTATCTCTTCCACTTAAAGTCCAAAGAC CTGAAACTACATGAATCGGACAGTGATATAACCGTAAAATATAATAAGGAAGATTATCATCTTTTAATCAACCACAGGGG GCAGGAAGTCTATCATAAACCCCTGTTACCACTCTTCTCCCGGCTCCATAAAGTAGTGAAAGAAAAAGGAGAAGAAAACC TCAAGCCCAATGACTACACCCTGATTCAGGAAAATGGAAAAGTTAAAGTAAAAGTTATTATTGCCCACATATCCGGGAGT GCACATAAATCAGACCCTGATAAAATAAACATATACAGTACTGATCTTTACCTGCTTTTAAAGGTTAAATAA
Upstream 100 bases:
>100_bases ATTATGGATTATGTTAATAAATGTTCCTTTTAATGTTATTTTTGATATGGCCAGTCCTGGTAACTAAATTTATGGATTAA ATAATAGGAGGCGGATTAAT
Downstream 100 bases:
>100_bases TTCTTTACCCTATATTTAAGGAGGCGTTAAGTTATGTTAAAAAAGATTATTAAAAGGATGTCACTTTTAATTTTTTTACT CTGCATATCCCTGGTATTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 583; Mature: 583
Protein sequence:
>583_residues MKKLKLFRHVLTSLTRSIKRFPLPTLFTTITTILMIILANEYLYDFDKNTVRLFSRLVMTSSLGFPLFLCINLLFRRWQG LKAGTRNLIRFTGAVALILYFFFLSKGTETVTTSRFLAFNLALYLLFLVIPYFYKRENFELYVVKLFIRVLVTIIYSVIL YLGLSAIFLTINALLDIPVSHRFYLNTWLITAGIFAPVFFLGGVPEQGQKINPDDYPTFFEILLLYIVMPLITIYTGILY IYFIKILITAQWPRGLVAHLVLWYSALSTVVMFFIHPLLYKKWVKQFIKWFPVTNIPLLIMMFVSIGKRINAYGVTENRY YVVLLGLWILGIMVYYILSSKKRNIILPLSLAIIMVLAVIGPWSSFSISRYSQNKRFAAILSRYRMIRDNRIIKTDKVIS ENDQKEINSIISYFKNNHDLDDLNYLPEGFTTDNMEELFGFSYSGNYYESYKYFSHKTYENREPIRVSGYDYLFHLKSKD LKLHESDSDITVKYNKEDYHLLINHRGQEVYHKPLLPLFSRLHKVVKEKGEENLKPNDYTLIQENGKVKVKVIIAHISGS AHKSDPDKINIYSTDLYLLLKVK
Sequences:
>Translated_583_residues MKKLKLFRHVLTSLTRSIKRFPLPTLFTTITTILMIILANEYLYDFDKNTVRLFSRLVMTSSLGFPLFLCINLLFRRWQG LKAGTRNLIRFTGAVALILYFFFLSKGTETVTTSRFLAFNLALYLLFLVIPYFYKRENFELYVVKLFIRVLVTIIYSVIL YLGLSAIFLTINALLDIPVSHRFYLNTWLITAGIFAPVFFLGGVPEQGQKINPDDYPTFFEILLLYIVMPLITIYTGILY IYFIKILITAQWPRGLVAHLVLWYSALSTVVMFFIHPLLYKKWVKQFIKWFPVTNIPLLIMMFVSIGKRINAYGVTENRY YVVLLGLWILGIMVYYILSSKKRNIILPLSLAIIMVLAVIGPWSSFSISRYSQNKRFAAILSRYRMIRDNRIIKTDKVIS ENDQKEINSIISYFKNNHDLDDLNYLPEGFTTDNMEELFGFSYSGNYYESYKYFSHKTYENREPIRVSGYDYLFHLKSKD LKLHESDSDITVKYNKEDYHLLINHRGQEVYHKPLLPLFSRLHKVVKEKGEENLKPNDYTLIQENGKVKVKVIIAHISGS AHKSDPDKINIYSTDLYLLLKVK >Mature_583_residues MKKLKLFRHVLTSLTRSIKRFPLPTLFTTITTILMIILANEYLYDFDKNTVRLFSRLVMTSSLGFPLFLCINLLFRRWQG LKAGTRNLIRFTGAVALILYFFFLSKGTETVTTSRFLAFNLALYLLFLVIPYFYKRENFELYVVKLFIRVLVTIIYSVIL YLGLSAIFLTINALLDIPVSHRFYLNTWLITAGIFAPVFFLGGVPEQGQKINPDDYPTFFEILLLYIVMPLITIYTGILY IYFIKILITAQWPRGLVAHLVLWYSALSTVVMFFIHPLLYKKWVKQFIKWFPVTNIPLLIMMFVSIGKRINAYGVTENRY YVVLLGLWILGIMVYYILSSKKRNIILPLSLAIIMVLAVIGPWSSFSISRYSQNKRFAAILSRYRMIRDNRIIKTDKVIS ENDQKEINSIISYFKNNHDLDDLNYLPEGFTTDNMEELFGFSYSGNYYESYKYFSHKTYENREPIRVSGYDYLFHLKSKD LKLHESDSDITVKYNKEDYHLLINHRGQEVYHKPLLPLFSRLHKVVKEKGEENLKPNDYTLIQENGKVKVKVIIAHISGS AHKSDPDKINIYSTDLYLLLKVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68288; Mature: 68288
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLKLFRHVLTSLTRSIKRFPLPTLFTTITTILMIILANEYLYDFDKNTVRLFSRLVMT CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH SSLGFPLFLCINLLFRRWQGLKAGTRNLIRFTGAVALILYFFFLSKGTETVTTSRFLAFN HCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LALYLLFLVIPYFYKRENFELYVVKLFIRVLVTIIYSVILYLGLSAIFLTINALLDIPVS HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC HRFYLNTWLITAGIFAPVFFLGGVPEQGQKINPDDYPTFFEILLLYIVMPLITIYTGILY CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH IYFIKILITAQWPRGLVAHLVLWYSALSTVVMFFIHPLLYKKWVKQFIKWFPVTNIPLLI HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH MMFVSIGKRINAYGVTENRYYVVLLGLWILGIMVYYILSSKKRNIILPLSLAIIMVLAVI HHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHH GPWSSFSISRYSQNKRFAAILSRYRMIRDNRIIKTDKVISENDQKEINSIISYFKNNHDL CCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCEEECCCHHCCCCHHHHHHHHHHHCCCCCC DDLNYLPEGFTTDNMEELFGFSYSGNYYESYKYFSHKTYENREPIRVSGYDYLFHLKSKD CHHHCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCEEECCCEEEEEECCCC LKLHESDSDITVKYNKEDYHLLINHRGQEVYHKPLLPLFSRLHKVVKEKGEENLKPNDYT CEEECCCCCEEEEECCCCEEEEEECCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCEE LIQENGKVKVKVIIAHISGSAHKSDPDKINIYSTDLYLLLKVK EEECCCEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEEEEEEC >Mature Secondary Structure MKKLKLFRHVLTSLTRSIKRFPLPTLFTTITTILMIILANEYLYDFDKNTVRLFSRLVMT CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH SSLGFPLFLCINLLFRRWQGLKAGTRNLIRFTGAVALILYFFFLSKGTETVTTSRFLAFN HCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LALYLLFLVIPYFYKRENFELYVVKLFIRVLVTIIYSVILYLGLSAIFLTINALLDIPVS HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC HRFYLNTWLITAGIFAPVFFLGGVPEQGQKINPDDYPTFFEILLLYIVMPLITIYTGILY CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH IYFIKILITAQWPRGLVAHLVLWYSALSTVVMFFIHPLLYKKWVKQFIKWFPVTNIPLLI HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH MMFVSIGKRINAYGVTENRYYVVLLGLWILGIMVYYILSSKKRNIILPLSLAIIMVLAVI HHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHH GPWSSFSISRYSQNKRFAAILSRYRMIRDNRIIKTDKVISENDQKEINSIISYFKNNHDL CCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCEEECCCHHCCCCHHHHHHHHHHHCCCCCC DDLNYLPEGFTTDNMEELFGFSYSGNYYESYKYFSHKTYENREPIRVSGYDYLFHLKSKD CHHHCCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCEEECCCEEEEEECCCC LKLHESDSDITVKYNKEDYHLLINHRGQEVYHKPLLPLFSRLHKVVKEKGEENLKPNDYT CEEECCCCCEEEEECCCCEEEEEECCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCEE LIQENGKVKVKVIIAHISGSAHKSDPDKINIYSTDLYLLLKVK EEECCCEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11248100 [H]