BacMap

Definition	Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome.
Accession	NC_011891
Length	5,029,329

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The map label for this gene is yjgI [H]

Identifier: 220918427

GI number: 220918427

Start: 3709839

End: 3710579

Strand: Direct

Name: yjgI [H]

Synonym: A2cp1_3331

Alternate gene names: 220918427

Gene position: 3709839-3710579 (Clockwise)

Preceding gene: 220918425

Following gene: 220918428

Centisome position: 73.76

GC content: 74.63

Gene sequence:

>741_bases
ATGGGAAACCTGCAGGGCAAGGTGGCGCTGGTGACCGGAGGGAGCCGCGGGATCGGGGCCGCCATCGTGCGGCGGCTGGC
GCGGGAGGGCGCGACCGTCGCGTTCACCTACGTCAGCTCGGAGGAGCCCGCCCGCCGGATCGCGGAGGCGGTGGAGCGCG
CGGGCGGCCGCGCGCGCGCGTACCGCGTGGACAGCGCCGACCCGGTGGCGGTCGAGCGGATCGTGGACGAGGTCGCCGCC
GAGCACGGGCGCCTCGACTTCCTCGTGAGCAACGCAGGCGTGGCGACGCTCAAGCCCGTCGAGGAGACCACCCTGGAGGA
CTTCGATCGGATCGTCGCGACCAACCTCCGATCGGTGTTCGCGGGCGCGCGCGCGGCCGCTCGCCACCTGCGCGCCGGCG
GGCGCATCATCACCATCGGCAGCGCCCACGACGAGCGGGTCCCGTTCGCGGGCATCTCCGCGTACGCGGCCAGCAAGGCC
GCGCTCGTCGGCCTGACCAAGGGCCTGGCGCGCGATCTGGGCCCGCGCGGCATCAGCGTGACGCTGGTGTCGCCGGGCCC
GATCGACACCGACATGAACCCGGCCAGCGGGCCGCTCGCCTCCACCGTCCTGCCGATGCTGGCCTTGCCGCGGTACGGGA
CGGGCGACGAGGTGGCCGGCCTGGTGGCGTACCTCGCCTCGGACGAGAGCGCGTTCGTCACCGGCGTCTCGCTCGCCATC
GACGGGGGGATCACCGCCTGA

Upstream 100 bases:

>100_bases
TGCCGGCCCCCTTTCTGTGTCGTACAGCATAGAAAGTCGGGCGGCTCCCTGGCAAGCGCCGTAGGCTTTCTATGTCGTTC
AATACAGAACGGGAGCAACC

Downstream 100 bases:

>100_bases
CGGGCGAACGCGGCGCCATCGCGCCACCCGCTCCGGTAGAGTGGCGCGATGGCGAACGCACCCGGTCACGCCTGCCCGCG
CTGCGGCGCACCCCGCGCGC

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MGNLQGKVALVTGGSRGIGAAIVRRLAREGATVAFTYVSSEEPARRIAEAVERAGGRARAYRVDSADPVAVERIVDEVAA
EHGRLDFLVSNAGVATLKPVEETTLEDFDRIVATNLRSVFAGARAAARHLRAGGRIITIGSAHDERVPFAGISAYAASKA
ALVGLTKGLARDLGPRGISVTLVSPGPIDTDMNPASGPLASTVLPMLALPRYGTGDEVAGLVAYLASDESAFVTGVSLAI
DGGITA

Sequences:

>Translated_246_residues
MGNLQGKVALVTGGSRGIGAAIVRRLAREGATVAFTYVSSEEPARRIAEAVERAGGRARAYRVDSADPVAVERIVDEVAA
EHGRLDFLVSNAGVATLKPVEETTLEDFDRIVATNLRSVFAGARAAARHLRAGGRIITIGSAHDERVPFAGISAYAASKA
ALVGLTKGLARDLGPRGISVTLVSPGPIDTDMNPASGPLASTVLPMLALPRYGTGDEVAGLVAYLASDESAFVTGVSLAI
DGGITA
>Mature_245_residues
GNLQGKVALVTGGSRGIGAAIVRRLAREGATVAFTYVSSEEPARRIAEAVERAGGRARAYRVDSADPVAVERIVDEVAAE
HGRLDFLVSNAGVATLKPVEETTLEDFDRIVATNLRSVFAGARAAARHLRAGGRIITIGSAHDERVPFAGISAYAASKAA
LVGLTKGLARDLGPRGISVTLVSPGPIDTDMNPASGPLASTVLPMLALPRYGTGDEVAGLVAYLASDESAFVTGVSLAID
GGITA

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI15277342, Length=252, Percent_Identity=34.1269841269841, Blast_Score=110, Evalue=9e-25,
Organism=Homo sapiens, GI32483357, Length=251, Percent_Identity=33.0677290836653, Blast_Score=102, Evalue=3e-22,
Organism=Homo sapiens, GI40254992, Length=244, Percent_Identity=34.4262295081967, Blast_Score=102, Evalue=4e-22,
Organism=Homo sapiens, GI7705925, Length=249, Percent_Identity=33.7349397590361, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI66933014, Length=256, Percent_Identity=32.03125, Blast_Score=99, Evalue=4e-21,
Organism=Homo sapiens, GI5031737, Length=258, Percent_Identity=30.6201550387597, Blast_Score=99, Evalue=5e-21,
Organism=Homo sapiens, GI19923817, Length=256, Percent_Identity=30.078125, Blast_Score=91, Evalue=8e-19,
Organism=Homo sapiens, GI10190704, Length=249, Percent_Identity=31.7269076305221, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI126723750, Length=252, Percent_Identity=29.3650793650794, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI33667109, Length=206, Percent_Identity=32.0388349514563, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI4758504, Length=273, Percent_Identity=31.5018315018315, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI31542939, Length=196, Percent_Identity=32.1428571428571, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI40807363, Length=221, Percent_Identity=26.2443438914027, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI209862901, Length=201, Percent_Identity=31.3432835820896, Blast_Score=71, Evalue=8e-13,
Organism=Homo sapiens, GI19923983, Length=201, Percent_Identity=31.3432835820896, Blast_Score=71, Evalue=8e-13,
Organism=Homo sapiens, GI59889578, Length=236, Percent_Identity=31.7796610169492, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI83715985, Length=268, Percent_Identity=29.4776119402985, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI4504505, Length=239, Percent_Identity=30.5439330543933, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI7706318, Length=209, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI109715829, Length=204, Percent_Identity=28.921568627451, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI4503817, Length=194, Percent_Identity=28.3505154639175, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI4503301, Length=255, Percent_Identity=25.0980392156863, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI126723191, Length=188, Percent_Identity=33.5106382978723, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI32455239, Length=219, Percent_Identity=27.3972602739726, Blast_Score=65, Evalue=8e-11,
Organism=Homo sapiens, GI5031765, Length=219, Percent_Identity=27.3972602739726, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI2367365, Length=246, Percent_Identity=47.1544715447154, Blast_Score=212, Evalue=2e-56,
Organism=Escherichia coli, GI1787335, Length=245, Percent_Identity=40.4081632653061, Blast_Score=159, Evalue=2e-40,
Organism=Escherichia coli, GI87082100, Length=257, Percent_Identity=36.1867704280156, Blast_Score=128, Evalue=4e-31,
Organism=Escherichia coli, GI1788459, Length=246, Percent_Identity=34.9593495934959, Blast_Score=128, Evalue=4e-31,
Organism=Escherichia coli, GI2367175, Length=244, Percent_Identity=34.0163934426229, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1789208, Length=252, Percent_Identity=31.3492063492063, Blast_Score=111, Evalue=5e-26,
Organism=Escherichia coli, GI1789378, Length=248, Percent_Identity=34.2741935483871, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1790717, Length=247, Percent_Identity=29.5546558704453, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI87082160, Length=250, Percent_Identity=31.6, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1789057, Length=271, Percent_Identity=30.9963099630996, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1786812, Length=262, Percent_Identity=29.3893129770992, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI1787905, Length=244, Percent_Identity=30.7377049180328, Blast_Score=87, Evalue=9e-19,
Organism=Escherichia coli, GI1787820, Length=184, Percent_Identity=29.3478260869565, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1787545, Length=258, Percent_Identity=28.2945736434109, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787526, Length=242, Percent_Identity=27.6859504132231, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1788891, Length=199, Percent_Identity=32.1608040201005, Blast_Score=61, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17561402, Length=255, Percent_Identity=31.3725490196078, Blast_Score=111, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI71994600, Length=247, Percent_Identity=31.5789473684211, Blast_Score=109, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI71994604, Length=253, Percent_Identity=33.201581027668, Blast_Score=108, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17560676, Length=256, Percent_Identity=31.640625, Blast_Score=107, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI17555706, Length=247, Percent_Identity=32.7935222672065, Blast_Score=107, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI17562910, Length=264, Percent_Identity=32.5757575757576, Blast_Score=107, Evalue=8e-24,
Organism=Caenorhabditis elegans, GI25147288, Length=247, Percent_Identity=31.9838056680162, Blast_Score=100, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI17536025, Length=256, Percent_Identity=33.984375, Blast_Score=100, Evalue=8e-22,
Organism=Caenorhabditis elegans, GI115534694, Length=246, Percent_Identity=32.9268292682927, Blast_Score=100, Evalue=9e-22,
Organism=Caenorhabditis elegans, GI17562906, Length=271, Percent_Identity=32.4723247232472, Blast_Score=94, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI17562908, Length=269, Percent_Identity=30.8550185873606, Blast_Score=91, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17536651, Length=256, Percent_Identity=31.25, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI193204405, Length=274, Percent_Identity=31.021897810219, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17559104, Length=261, Percent_Identity=31.0344827586207, Blast_Score=85, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17531453, Length=266, Percent_Identity=32.3308270676692, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71982365, Length=193, Percent_Identity=29.0155440414508, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI193203115, Length=214, Percent_Identity=28.5046728971963, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17508895, Length=237, Percent_Identity=26.1603375527426, Blast_Score=80, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI17560150, Length=267, Percent_Identity=27.7153558052434, Blast_Score=80, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI193203117, Length=211, Percent_Identity=28.9099526066351, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17538182, Length=261, Percent_Identity=32.9501915708812, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17508651, Length=255, Percent_Identity=30.1960784313725, Blast_Score=79, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17560220, Length=267, Percent_Identity=30.3370786516854, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71997099, Length=210, Percent_Identity=30.952380952381, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17564282, Length=209, Percent_Identity=27.2727272727273, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17560332, Length=269, Percent_Identity=28.6245353159851, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17565030, Length=263, Percent_Identity=28.8973384030418, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17555612, Length=211, Percent_Identity=31.2796208530806, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17544670, Length=261, Percent_Identity=27.9693486590038, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17568967, Length=236, Percent_Identity=29.2372881355932, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI86565303, Length=213, Percent_Identity=28.6384976525822, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17562904, Length=269, Percent_Identity=27.5092936802974, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17538480, Length=264, Percent_Identity=26.8939393939394, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17551412, Length=260, Percent_Identity=27.3076923076923, Blast_Score=70, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17562990, Length=270, Percent_Identity=28.1481481481481, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI72000259, Length=260, Percent_Identity=27.6923076923077, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17563726, Length=259, Percent_Identity=25.0965250965251, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17538486, Length=270, Percent_Identity=27.4074074074074, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17558628, Length=193, Percent_Identity=27.4611398963731, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17561272, Length=253, Percent_Identity=28.8537549407115, Blast_Score=65, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6324126, Length=249, Percent_Identity=27.710843373494, Blast_Score=79, Evalue=7e-16,
Organism=Saccharomyces cerevisiae, GI6322227, Length=200, Percent_Identity=30, Blast_Score=78, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6322226, Length=191, Percent_Identity=31.9371727748691, Blast_Score=78, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6322861, Length=241, Percent_Identity=27.8008298755187, Blast_Score=69, Evalue=6e-13,
Organism=Saccharomyces cerevisiae, GI6320089, Length=201, Percent_Identity=27.363184079602, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28571526, Length=252, Percent_Identity=37.3015873015873, Blast_Score=140, Evalue=9e-34,
Organism=Drosophila melanogaster, GI24644339, Length=249, Percent_Identity=36.144578313253, Blast_Score=138, Evalue=4e-33,
Organism=Drosophila melanogaster, GI21357041, Length=253, Percent_Identity=37.5494071146245, Blast_Score=132, Evalue=2e-31,
Organism=Drosophila melanogaster, GI24643142, Length=259, Percent_Identity=37.0656370656371, Blast_Score=126, Evalue=2e-29,
Organism=Drosophila melanogaster, GI23397609, Length=250, Percent_Identity=36.8, Blast_Score=122, Evalue=2e-28,
Organism=Drosophila melanogaster, GI21355319, Length=257, Percent_Identity=33.0739299610895, Blast_Score=119, Evalue=3e-27,
Organism=Drosophila melanogaster, GI24644337, Length=250, Percent_Identity=32.8, Blast_Score=97, Evalue=9e-21,
Organism=Drosophila melanogaster, GI24639444, Length=253, Percent_Identity=31.6205533596838, Blast_Score=95, Evalue=4e-20,
Organism=Drosophila melanogaster, GI17737361, Length=259, Percent_Identity=31.6602316602317, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI21357673, Length=194, Percent_Identity=27.8350515463918, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI116007236, Length=239, Percent_Identity=28.4518828451883, Blast_Score=74, Evalue=8e-14,
Organism=Drosophila melanogaster, GI24584752, Length=196, Percent_Identity=29.5918367346939, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24581726, Length=221, Percent_Identity=28.5067873303167, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24641232, Length=218, Percent_Identity=29.3577981651376, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21355631, Length=173, Percent_Identity=28.3236994219653, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI21356301, Length=195, Percent_Identity=27.1794871794872, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 25246; Mature: 25115

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNLQGKVALVTGGSRGIGAAIVRRLAREGATVAFTYVSSEEPARRIAEAVERAGGRARA
CCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEE
YRVDSADPVAVERIVDEVAAEHGRLDFLVSNAGVATLKPVEETTLEDFDRIVATNLRSVF
EECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHH
AGARAAARHLRAGGRIITIGSAHDERVPFAGISAYAASKAALVGLTKGLARDLGPRGISV
HHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
TLVSPGPIDTDMNPASGPLASTVLPMLALPRYGTGDEVAGLVAYLASDESAFVTGVSLAI
EEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEE
DGGITA
CCCCCC
>Mature Secondary Structure 
GNLQGKVALVTGGSRGIGAAIVRRLAREGATVAFTYVSSEEPARRIAEAVERAGGRARA
CCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEE
YRVDSADPVAVERIVDEVAAEHGRLDFLVSNAGVATLKPVEETTLEDFDRIVATNLRSVF
EECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHH
AGARAAARHLRAGGRIITIGSAHDERVPFAGISAYAASKAALVGLTKGLARDLGPRGISV
HHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
TLVSPGPIDTDMNPASGPLASTVLPMLALPRYGTGDEVAGLVAYLASDESAFVTGVSLAI
EEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEE
DGGITA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]