| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220918428
Identifier: 220918428
GI number: 220918428
Start: 3710628
End: 3711587
Strand: Direct
Name: 220918428
Synonym: A2cp1_3332
Alternate gene names: NA
Gene position: 3710628-3711587 (Clockwise)
Preceding gene: 220918427
Following gene: 220918429
Centisome position: 73.78
GC content: 79.48
Gene sequence:
>960_bases ATGGCGAACGCACCCGGTCACGCCTGCCCGCGCTGCGGCGCACCCCGCGCGCCCGGGCCGGAGTGCCCGGGGTGCGGGGT GATCTATGCGAAGGCCCGGCCGCGGCCGGTGCCTGCCACCCCGCTGCCGGATGCGCCGCAGCCGGAGCTCGGCGCGGAGG GCGGCGCGCTCGGGATGCCGCCGCCGGCGCGCTGGTCCGGCGCGCTGGACGGCGCCCGCCGCGAGCTGTGGATCCGGGCG GTCGCGCCGCCTGCCGCGCTGCTCGTCGCGCTCGCGCTGGTCGCGAGCGGACCCGGCCACGCGCTGCTCCGCACCTTCCT GTCCATGTGGATCCACGAGCTCGGTCACGCCACCACCGCCTGGCTGTGCGGCCACGGCGCCTTCCCCGGCCCCTGGCGAA CGCCGATCTCGGCGGCGCGGCTCCCGCTCGTGGTGGTGTCGGTCGCCGGTGGGCTCGCCGCGCTCGCCTGGCGAGGCTGG CGCACCGGGCGGCGGGCGCTCCTCGCCGCCGGCCTGGCCGGCCTCGGCGTCCAGCTCGTCTGCACGCTGCTGCCGGCCGG GACCGCCCGGGCGCTCATCACGTTCGGCGGCGACGCGGGGTGCATGGTGATCGGCGCGGCCCTGGTGGCGACGATCTGGT CCGATCCCGAGGGCCCGCTCGGCCGCGGCTCGCTGCGGTGGGGCTTCCTCGTCATCGGCGCGGCGGCGCTGGTGGACGCG CTGCACGGCTGGGTGCACGCGTGGCGCGACCCCGGGGAGCTCCCGCTCGGCGAGATCGAGGGCGTCGGCCTCTCCGACGC GAGCACGCTCATGCAGGTGCACCGCTGGAGCGCGTCCGCGCTCTCCGGCCGCTACGTGGCGCTCGGGCTCGCCTGCCTCG CGGGGCTCGGCGCGGCCTACGCGGTGATGCTGGCGCGGGCCCGGGCGGCGGTCGCGGGGGAGGCGCGGCCGGGCGCCTGA
Upstream 100 bases:
>100_bases CGCGTTCGTCACCGGCGTCTCGCTCGCCATCGACGGGGGGATCACCGCCTGACGGGCGAACGCGGCGCCATCGCGCCACC CGCTCCGGTAGAGTGGCGCG
Downstream 100 bases:
>100_bases GCCGTTCGGCTCGTGCCTCCGACATAACGGACGCCGGTGAGCCCATAACTAGCGGTCTACGTCGGGCATCTACATAAAAC GGACGCACGTCCTAGAAAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MANAPGHACPRCGAPRAPGPECPGCGVIYAKARPRPVPATPLPDAPQPELGAEGGALGMPPPARWSGALDGARRELWIRA VAPPAALLVALALVASGPGHALLRTFLSMWIHELGHATTAWLCGHGAFPGPWRTPISAARLPLVVVSVAGGLAALAWRGW RTGRRALLAAGLAGLGVQLVCTLLPAGTARALITFGGDAGCMVIGAALVATIWSDPEGPLGRGSLRWGFLVIGAAALVDA LHGWVHAWRDPGELPLGEIEGVGLSDASTLMQVHRWSASALSGRYVALGLACLAGLGAAYAVMLARARAAVAGEARPGA
Sequences:
>Translated_319_residues MANAPGHACPRCGAPRAPGPECPGCGVIYAKARPRPVPATPLPDAPQPELGAEGGALGMPPPARWSGALDGARRELWIRA VAPPAALLVALALVASGPGHALLRTFLSMWIHELGHATTAWLCGHGAFPGPWRTPISAARLPLVVVSVAGGLAALAWRGW RTGRRALLAAGLAGLGVQLVCTLLPAGTARALITFGGDAGCMVIGAALVATIWSDPEGPLGRGSLRWGFLVIGAAALVDA LHGWVHAWRDPGELPLGEIEGVGLSDASTLMQVHRWSASALSGRYVALGLACLAGLGAAYAVMLARARAAVAGEARPGA >Mature_318_residues ANAPGHACPRCGAPRAPGPECPGCGVIYAKARPRPVPATPLPDAPQPELGAEGGALGMPPPARWSGALDGARRELWIRAV APPAALLVALALVASGPGHALLRTFLSMWIHELGHATTAWLCGHGAFPGPWRTPISAARLPLVVVSVAGGLAALAWRGWR TGRRALLAAGLAGLGVQLVCTLLPAGTARALITFGGDAGCMVIGAALVATIWSDPEGPLGRGSLRWGFLVIGAAALVDAL HGWVHAWRDPGELPLGEIEGVGLSDASTLMQVHRWSASALSGRYVALGLACLAGLGAAYAVMLARARAAVAGEARPGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32384; Mature: 32253
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: PS00546 CYSTEINE_SWITCH
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANAPGHACPRCGAPRAPGPECPGCGVIYAKARPRPVPATPLPDAPQPELGAEGGALGMP CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPARWSGALDGARRELWIRAVAPPAALLVALALVASGPGHALLRTFLSMWIHELGHATTA CCCCCCCCCCCHHHHEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHEE WLCGHGAFPGPWRTPISAARLPLVVVSVAGGLAALAWRGWRTGRRALLAAGLAGLGVQLV HEECCCCCCCCCCCCHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CTLLPAGTARALITFGGDAGCMVIGAALVATIWSDPEGPLGRGSLRWGFLVIGAAALVDA HHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH LHGWVHAWRDPGELPLGEIEGVGLSDASTLMQVHRWSASALSGRYVALGLACLAGLGAAY HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH AVMLARARAAVAGEARPGA HHHHHHHHHHHCCCCCCCC >Mature Secondary Structure ANAPGHACPRCGAPRAPGPECPGCGVIYAKARPRPVPATPLPDAPQPELGAEGGALGMP CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PPARWSGALDGARRELWIRAVAPPAALLVALALVASGPGHALLRTFLSMWIHELGHATTA CCCCCCCCCCCHHHHEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHEE WLCGHGAFPGPWRTPISAARLPLVVVSVAGGLAALAWRGWRTGRRALLAAGLAGLGVQLV HEECCCCCCCCCCCCHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CTLLPAGTARALITFGGDAGCMVIGAALVATIWSDPEGPLGRGSLRWGFLVIGAAALVDA HHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH LHGWVHAWRDPGELPLGEIEGVGLSDASTLMQVHRWSASALSGRYVALGLACLAGLGAAY HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH AVMLARARAAVAGEARPGA HHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA