Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is yicG [C]
Identifier: 220918284
GI number: 220918284
Start: 3529464
End: 3530132
Strand: Direct
Name: yicG [C]
Synonym: A2cp1_3187
Alternate gene names: 220918284
Gene position: 3529464-3530132 (Clockwise)
Preceding gene: 220918282
Following gene: 220918285
Centisome position: 70.18
GC content: 74.29
Gene sequence:
>669_bases GTGCCCCACGCCGCGCGGTTCCTCGAGAACCCGTTCCAGCTCCACGTCACGTTCGACCTCGCCGCGACCTACCTGTTCGC GGTGACGGGCGCGCTGGCCGCGATCGCCAAGCGGTACGACCTGGTGGGCGTGCTGGTGCTCGCGTTCGTCACCGGCCTCG GCGGCGCGCTGCTCCGCGACGGCCTGTTCCTGCAGTTCGGCCCGCCCGCCGTCGTCACCGACGGCCGCTACCTGGTGGCG GTGGCGCTCGGGGCGGCCACCGGCATCTTCTTCGGCCGGCGGCTGCACCGGTTCCGCATCCCGTTCCTGCTCGCGGACGC CGTGGCGCTCGGGACGTACGGGGTGGTCGGCGCGCAGAAGTCGCTCGCGGTGGGGCTGCCGGTGGTCACCGCGCTGATGG TCGGCGCGGTGAACGCGGTCGGCGGCGGCATGCTGCGCGACGTCCTGGTGCGGGACGTGCCGCTCGTCTTCAAGCCGGGC GAGTTCTACGCGCTCGCCGCCATGGCGGGAGAGCTGGTGTTCCTCGGCCTCACCCGCGGCGCCGGGCTGCCCGGCACGCT CTCGGCGCTGATCGCGATCGCCGCCGCGTTCGCGGTCCGGATCCTGTCGGTGTGGCTGGGCTGGCGGACGGAGGCGCTGT CGGGCGAGGACGGGACAGGCGAGCGCTAG
Upstream 100 bases:
>100_bases TCTCGGGGTTGCGGGGGCGCAGCAGCACCAGGCGGACGGGGAGGCGCATCGCGGCGCATGGTACCGCGCCGGCCCGGCCC GGCCGTGCTAAAGGAGGCGC
Downstream 100 bases:
>100_bases TTCACTTGCCGCGGGTCAATGCCGACCCGGCAGGGGTTCCCTTAAGGTGCGCCCTCCGAGGATTCTTTCCCGCGCACAGG AGCTCCCATGTCGCTCGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MPHAARFLENPFQLHVTFDLAATYLFAVTGALAAIAKRYDLVGVLVLAFVTGLGGALLRDGLFLQFGPPAVVTDGRYLVA VALGAATGIFFGRRLHRFRIPFLLADAVALGTYGVVGAQKSLAVGLPVVTALMVGAVNAVGGGMLRDVLVRDVPLVFKPG EFYALAAMAGELVFLGLTRGAGLPGTLSALIAIAAAFAVRILSVWLGWRTEALSGEDGTGER
Sequences:
>Translated_222_residues MPHAARFLENPFQLHVTFDLAATYLFAVTGALAAIAKRYDLVGVLVLAFVTGLGGALLRDGLFLQFGPPAVVTDGRYLVA VALGAATGIFFGRRLHRFRIPFLLADAVALGTYGVVGAQKSLAVGLPVVTALMVGAVNAVGGGMLRDVLVRDVPLVFKPG EFYALAAMAGELVFLGLTRGAGLPGTLSALIAIAAAFAVRILSVWLGWRTEALSGEDGTGER >Mature_221_residues PHAARFLENPFQLHVTFDLAATYLFAVTGALAAIAKRYDLVGVLVLAFVTGLGGALLRDGLFLQFGPPAVVTDGRYLVAV ALGAATGIFFGRRLHRFRIPFLLADAVALGTYGVVGAQKSLAVGLPVVTALMVGAVNAVGGGMLRDVLVRDVPLVFKPGE FYALAAMAGELVFLGLTRGAGLPGTLSALIAIAAAFAVRILSVWLGWRTEALSGEDGTGER
Specific function: Unknown
COG id: COG2860
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0126 family [H]
Homologues:
Organism=Escherichia coli, GI87082304, Length=153, Percent_Identity=33.3333333333333, Blast_Score=73, Evalue=1e-14, Organism=Escherichia coli, GI1786352, Length=190, Percent_Identity=31.0526315789474, Blast_Score=63, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005115 [H]
Pfam domain/function: PF03458 UPF0126 [H]
EC number: NA
Molecular weight: Translated: 23096; Mature: 22964
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHAARFLENPFQLHVTFDLAATYLFAVTGALAAIAKRYDLVGVLVLAFVTGLGGALLRD CCCHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC GLFLQFGPPAVVTDGRYLVAVALGAATGIFFGRRLHRFRIPFLLADAVALGTYGVVGAQK CEEEEECCCEEEECCCEEEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCHHHHCCCC SLAVGLPVVTALMVGAVNAVGGGMLRDVLVRDVPLVFKPGEFYALAAMAGELVFLGLTRG HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCEEEECCCHHHHHHHHCCEEEEEECCC AGLPGTLSALIAIAAAFAVRILSVWLGWRTEALSGEDGTGER CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure PHAARFLENPFQLHVTFDLAATYLFAVTGALAAIAKRYDLVGVLVLAFVTGLGGALLRD CCHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC GLFLQFGPPAVVTDGRYLVAVALGAATGIFFGRRLHRFRIPFLLADAVALGTYGVVGAQK CEEEEECCCEEEECCCEEEEHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCHHHHCCCC SLAVGLPVVTALMVGAVNAVGGGMLRDVLVRDVPLVFKPGEFYALAAMAGELVFLGLTRG HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCEEEECCCHHHHHHHHCCEEEEEECCC AGLPGTLSALIAIAAAFAVRILSVWLGWRTEALSGEDGTGER CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]