Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
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Accession | NC_011891 |
Length | 5,029,329 |
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The map label for this gene is 220918285
Identifier: 220918285
GI number: 220918285
Start: 3530220
End: 3530789
Strand: Direct
Name: 220918285
Synonym: A2cp1_3188
Alternate gene names: NA
Gene position: 3530220-3530789 (Clockwise)
Preceding gene: 220918284
Following gene: 220918288
Centisome position: 70.19
GC content: 71.05
Gene sequence:
>570_bases ATGTCGCTCGTCCGCAGCCTGCTCGTCGCCGCCCTCGCCCTCGCCGTCCCGCTCACCACCCGCGCCGCGGGCGGTCACGA CAGCGTGGGCTGCGGCGGCTGCCACTCCATCCACACCGCGAAGGGCAAGATCATCTTCGCGGTCACGCCGAACACGAAGG CGCTCGACCCCAAGACCAAGCAGCCGTACTCCGGCACGACCGCGCTCTGCCTCGCCTGCCACGCCGACTCGAAGGACGGC GGCCAGGGCTACGCGCCGGTGTCCGGCCACATGAGCCACCCGTACGGCGTCTCCAGCGTGAACCCGAAGGTCGCGAAGGT TCCGGGCGAGCTGCTGCGAGACGGCCGCTTCGAGTGCATCGGCTGCCACGATCCGCACCCGTCCAACCCGAACTACAAGT ACCTCCGCGTCGACACCGCCAAGGGCCAGCAGATGGACGCGTTCTGTGGCGTGTGCCACCCGGGCAAGGCCGACGCCGCC ACCGTGAAGCAGGCGGCGCTCTTCACCTCGATGGACGAGTCCGGCGCGAAGCGCGCCGCCGCGCCCGCCCCTGCGCCCGC GAAGAAGTAG
Upstream 100 bases:
>100_bases AGGCGAGCGCTAGTTCACTTGCCGCGGGTCAATGCCGACCCGGCAGGGGTTCCCTTAAGGTGCGCCCTCCGAGGATTCTT TCCCGCGCACAGGAGCTCCC
Downstream 100 bases:
>100_bases CGGAGCGAGGCTCGCCGCCGCCCGTGGCCTGGCGCCGCGGGCGGCGGTGCCGTCCTCGACGGGCGGCTGTCAGCGCGCGA CGGCCAGCGCGGCGCGGGGT
Product: multiheme cytochrome
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MSLVRSLLVAALALAVPLTTRAAGGHDSVGCGGCHSIHTAKGKIIFAVTPNTKALDPKTKQPYSGTTALCLACHADSKDG GQGYAPVSGHMSHPYGVSSVNPKVAKVPGELLRDGRFECIGCHDPHPSNPNYKYLRVDTAKGQQMDAFCGVCHPGKADAA TVKQAALFTSMDESGAKRAAAPAPAPAKK
Sequences:
>Translated_189_residues MSLVRSLLVAALALAVPLTTRAAGGHDSVGCGGCHSIHTAKGKIIFAVTPNTKALDPKTKQPYSGTTALCLACHADSKDG GQGYAPVSGHMSHPYGVSSVNPKVAKVPGELLRDGRFECIGCHDPHPSNPNYKYLRVDTAKGQQMDAFCGVCHPGKADAA TVKQAALFTSMDESGAKRAAAPAPAPAKK >Mature_188_residues SLVRSLLVAALALAVPLTTRAAGGHDSVGCGGCHSIHTAKGKIIFAVTPNTKALDPKTKQPYSGTTALCLACHADSKDGG QGYAPVSGHMSHPYGVSSVNPKVAKVPGELLRDGRFECIGCHDPHPSNPNYKYLRVDTAKGQQMDAFCGVCHPGKADAAT VKQAALFTSMDESGAKRAAAPAPAPAKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19489; Mature: 19358
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLVRSLLVAALALAVPLTTRAAGGHDSVGCGGCHSIHTAKGKIIFAVTPNTKALDPKTK CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCEEEEEECCCCCCCCCCCC QPYSGTTALCLACHADSKDGGQGYAPVSGHMSHPYGVSSVNPKVAKVPGELLRDGRFECI CCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHCCCEEEE GCHDPHPSNPNYKYLRVDTAKGQQMDAFCGVCHPGKADAATVKQAALFTSMDESGAKRAA ECCCCCCCCCCEEEEEEECCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC APAPAPAKK CCCCCCCCC >Mature Secondary Structure SLVRSLLVAALALAVPLTTRAAGGHDSVGCGGCHSIHTAKGKIIFAVTPNTKALDPKTK HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCEEEEEECCCCCCCCCCCC QPYSGTTALCLACHADSKDGGQGYAPVSGHMSHPYGVSSVNPKVAKVPGELLRDGRFECI CCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHCCCEEEE GCHDPHPSNPNYKYLRVDTAKGQQMDAFCGVCHPGKADAATVKQAALFTSMDESGAKRAA ECCCCCCCCCCEEEEEEECCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC APAPAPAKK CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA